RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 NETO1Q8TDF5 533 aa5.04□□□□□ -1.6
SMG1-212ENST00000566328 PIDD1Q9HB75 910 aa5.04□□□□□ -1.6
SMG1-212ENST00000566328 TMEM88BA6NKF7 163 aa5.03□□□□□ -1.6
SMG1-212ENST00000566328 FARP2O94887 1054 aaPredicted RBP5.03□□□□□ -1.6
SMG1-212ENST00000566328 TRIM56Q9BRZ2 755 aaKnown RBP5.03□□□□□ -1.6
SMG1-212ENST00000566328 WDR18Q9BV38 432 aa5.03□□□□□ -1.6
SMG1-212ENST00000566328 KRTAP4-11Q9BYQ6 195 aa5.03□□□□□ -1.6
SMG1-212ENST00000566328 EHD4Q9H223 541 aa5.03□□□□□ -1.6
SMG1-212ENST00000566328 ATXN3LQ9H3M9 355 aa5.03□□□□□ -1.6
SMG1-212ENST00000566328 ZNF576Q9H609 170 aa5.03□□□□□ -1.6
SMG1-212ENST00000566328 BRPF3Q9ULD4 1205 aa5.03□□□□□ -1.6
SMG1-212ENST00000566328 DYNC1LI2O43237 492 aaPredicted RBP5.02□□□□□ -1.61
SMG1-212ENST00000566328 ITPKAP23677 461 aa5.02□□□□□ -1.61
SMG1-212ENST00000566328 PDE3BQ13370 1112 aa5.02□□□□□ -1.61
SMG1-212ENST00000566328 RPS26P11Q5JNZ5 115 aaPredicted RBP5.02□□□□□ -1.61
SMG1-212ENST00000566328 SPRED2Q7Z698 418 aa5.02□□□□□ -1.61
SMG1-212ENST00000566328 LGR6Q9HBX8 967 aa5.02□□□□□ -1.61
SMG1-212ENST00000566328 VAV3Q9UKW4 847 aa5.02□□□□□ -1.61
SMG1-212ENST00000566328 DBX1A6NMT0 343 aa5.01□□□□□ -1.61
SMG1-212ENST00000566328 CPNE3O75131 537 aaKnown RBP5.01□□□□□ -1.61
SMG1-212ENST00000566328 ECEL1O95672 775 aa5.01□□□□□ -1.61
SMG1-212ENST00000566328 FAM87AP0C7U9 286 aa5.01□□□□□ -1.61
SMG1-212ENST00000566328 FUT4P22083 530 aa5.01□□□□□ -1.61
SMG1-212ENST00000566328 IFI16Q16666 785 aaKnown RBP5.01□□□□□ -1.61
SMG1-212ENST00000566328 ZNF648Q5T619 568 aaPredicted RBP5.01□□□□□ -1.61
SMG1-212ENST00000566328 ZNF574Q6ZN55 896 aaPredicted RBP5.01□□□□□ -1.61
SMG1-212ENST00000566328 ARHGAP27Q6ZUM4 889 aa5.01□□□□□ -1.61
SMG1-212ENST00000566328 PI4K2BQ8TCG2 481 aa5.01□□□□□ -1.61
SMG1-212ENST00000566328 TMEM40Q8WWA1 233 aa5.01□□□□□ -1.61
SMG1-212ENST00000566328 SLC38A3Q99624 504 aa5.01□□□□□ -1.61
SMG1-212ENST00000566328 RC3H2Q9HBD1 1191 aaKnown RBP5.01□□□□□ -1.61
SMG1-212ENST00000566328 MKNK2Q9HBH9 465 aa5.01□□□□□ -1.61
SMG1-212ENST00000566328 EGFL7Q9UHF1 273 aa5.01□□□□□ -1.61
SMG1-212ENST00000566328 PPP1R9AQ9ULJ8 1098 aa5.01□□□□□ -1.61
SMG1-212ENST00000566328 NDUFB5O43674 189 aa5□□□□□ -1.61
SMG1-212ENST00000566328 ID3Q02535 119 aa5□□□□□ -1.61
SMG1-212ENST00000566328 PRKCQQ04759 706 aa5□□□□□ -1.61
SMG1-212ENST00000566328 ZNF211Q13398 564 aaPredicted RBP5□□□□□ -1.61
SMG1-212ENST00000566328 B4GALNT3Q6L9W6 998 aa5□□□□□ -1.61
SMG1-212ENST00000566328 KSR1Q8IVT5 923 aa5□□□□□ -1.61
SMG1-212ENST00000566328 SMYD4Q8IYR2 804 aaPredicted RBP5□□□□□ -1.61
SMG1-212ENST00000566328 PLD6Q8N2A8 252 aaKnown RBP5□□□□□ -1.61
SMG1-212ENST00000566328 GLIS3Q8NEA6 775 aa5□□□□□ -1.61
SMG1-212ENST00000566328 FAM168AQ92567 244 aa5□□□□□ -1.61
SMG1-212ENST00000566328 ANO2Q9NQ90 1003 aa5□□□□□ -1.61
SMG1-212ENST00000566328 CRIM1Q9NZV1 1036 aa5□□□□□ -1.61
SMG1-212ENST00000566328 TRAK1Q9UPV9 953 aa5□□□□□ -1.61
SMG1-212ENST00000566328 CARMIL2Q6F5E8 1435 aa4.99□□□□□ -1.61
SMG1-212ENST00000566328 TMEM265A0A087WTH1 108 aa4.99□□□□□ -1.61
SMG1-212ENST00000566328 TMPRSS2O15393 492 aa4.99□□□□□ -1.61
SMG1-212ENST00000566328 CD8BP10966 210 aa4.99□□□□□ -1.61
SMG1-212ENST00000566328 BNIP3Q12983 259 aa4.99□□□□□ -1.61
SMG1-212ENST00000566328 CDK5R2Q13319 367 aa4.99□□□□□ -1.61
SMG1-212ENST00000566328 HRASLS5Q96KN8 279 aa4.99□□□□□ -1.61
SMG1-212ENST00000566328 FANCD2OSQ96PS1 177 aa4.99□□□□□ -1.61
SMG1-212ENST00000566328 CITED4Q96RK1 184 aa4.99□□□□□ -1.61
SMG1-212ENST00000566328 KRT82Q9NSB4 513 aa4.99□□□□□ -1.61
SMG1-212ENST00000566328 PPP4R2Q9NY27 417 aa4.99□□□□□ -1.61
SMG1-212ENST00000566328 TMEM238LA0A1B0GVL6 79 aa4.98□□□□□ -1.61
SMG1-212ENST00000566328 ICMTO60725 284 aa4.98□□□□□ -1.61
SMG1-212ENST00000566328 RNGTTO60942 597 aaKnown RBP4.98□□□□□ -1.61
SMG1-212ENST00000566328 RNASE1P07998 156 aaKnown RBP4.98□□□□□ -1.61
SMG1-212ENST00000566328 LIG1P18858 919 aa4.98□□□□□ -1.61
SMG1-212ENST00000566328 PPP2R3AQ06190 1150 aa4.98□□□□□ -1.61
SMG1-212ENST00000566328 AOC3Q16853 763 aa4.98□□□□□ -1.61
SMG1-212ENST00000566328 USPL1Q5W0Q7 1092 aa4.98□□□□□ -1.61
SMG1-212ENST00000566328 PHLDB3Q6NSJ2 640 aa4.98□□□□□ -1.61
SMG1-212ENST00000566328 PRPF40BQ6NWY9 871 aaKnown RBP4.98□□□□□ -1.61
SMG1-212ENST00000566328 WFDC3Q8IUB2 231 aa4.98□□□□□ -1.61
SMG1-212ENST00000566328 GLYCTKQ8IVS8 523 aa4.98□□□□□ -1.61
SMG1-212ENST00000566328 FAM181AQ8N9Y4 354 aa4.98□□□□□ -1.61
SMG1-212ENST00000566328 DNAJC25Q9H1X3 360 aa4.98□□□□□ -1.61
SMG1-212ENST00000566328 CCDC86Q9H6F5 360 aaKnown RBP4.98□□□□□ -1.61
SMG1-212ENST00000566328 NPHS2Q9NP85 383 aa4.98□□□□□ -1.61
SMG1-212ENST00000566328 FAM53CQ9NYF3 392 aa4.98□□□□□ -1.61
SMG1-212ENST00000566328 PCOLCE2Q9UKZ9 415 aa4.98□□□□□ -1.61
SMG1-212ENST00000566328 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.98□□□□□ -1.61
SMG1-212ENST00000566328 GADD45BO75293 160 aaPredicted RBP4.97□□□□□ -1.61
SMG1-212ENST00000566328 ZNF124Q15973 351 aa4.97□□□□□ -1.61
SMG1-212ENST00000566328 KIF4BQ2VIQ3 1234 aa4.97□□□□□ -1.61
SMG1-212ENST00000566328 ANGEL2Q5VTE6 544 aaKnown RBP4.97□□□□□ -1.61
SMG1-212ENST00000566328 ABCB6Q9NP58 842 aa4.97□□□□□ -1.61
SMG1-212ENST00000566328 SSU72Q9NP77 194 aaKnown RBP4.97□□□□□ -1.61
SMG1-212ENST00000566328 MBNL3Q9NUK0 354 aaKnown RBP4.97□□□□□ -1.61
SMG1-212ENST00000566328 SNX11Q9Y5W9 270 aa4.97□□□□□ -1.61
SMG1-212ENST00000566328 ARID3CA6NKF2 412 aa4.96□□□□□ -1.62
SMG1-212ENST00000566328 H3BRB1 525 aa4.96□□□□□ -1.62
SMG1-212ENST00000566328 CEACAM5P06731 702 aa4.96□□□□□ -1.62
SMG1-212ENST00000566328 GSTP1P09211 210 aaKnown RBP4.96□□□□□ -1.62
SMG1-212ENST00000566328 ORC1Q13415 861 aa4.96□□□□□ -1.62
SMG1-212ENST00000566328 KRTAP19-4Q3LI73 84 aa4.96□□□□□ -1.62
SMG1-212ENST00000566328 FBLN7Q53RD9 439 aa4.96□□□□□ -1.62
SMG1-212ENST00000566328 SLC23A3Q6PIS1 610 aa4.96□□□□□ -1.62
SMG1-212ENST00000566328 BHLHE22Q8NFJ8 381 aaPredicted RBP4.96□□□□□ -1.62
SMG1-212ENST00000566328 CCDC74AQ96AQ1 378 aa4.96□□□□□ -1.62
SMG1-212ENST00000566328 WDR89Q96FK6 387 aaPredicted RBP4.96□□□□□ -1.62
SMG1-212ENST00000566328 FAM84AQ96KN4 292 aa4.96□□□□□ -1.62
SMG1-212ENST00000566328 DUSP23Q9BVJ7 150 aa4.96□□□□□ -1.62
SMG1-212ENST00000566328 KRTAP17-1Q9BYP8 105 aa4.96□□□□□ -1.62
SMG1-212ENST00000566328 KRTAP4-5Q9BYR2 181 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms