RNA–Protein interactions for RNA: ENST00000566307.1

LSM3P5-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 5, humanhuman

BASIC

Gene LSM3P5, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P5-201ENST00000566307 TXNRD3Q86VQ6 643 aa10.49□□□□□ -0.73
LSM3P5-201ENST00000566307 IFNL3Q8IZI9 196 aa10.49□□□□□ -0.73
LSM3P5-201ENST00000566307 TBC1D16Q8TBP0 767 aa10.49□□□□□ -0.73
LSM3P5-201ENST00000566307 FAM212AQ96EL1 285 aa10.49□□□□□ -0.73
LSM3P5-201ENST00000566307 ZNF274Q96GC6 653 aaPredicted RBP10.49□□□□□ -0.73
LSM3P5-201ENST00000566307 LLPHQ9BRT6 129 aaKnown RBP10.49□□□□□ -0.73
LSM3P5-201ENST00000566307 ANAPC4Q9UJX5 808 aa10.49□□□□□ -0.73
LSM3P5-201ENST00000566307 SUGT1Q9Y2Z0 365 aa10.49□□□□□ -0.73
LSM3P5-201ENST00000566307 FAM205AQ6ZU69 1335 aa10.49□□□□□ -0.73
LSM3P5-201ENST00000566307 WDR33Q9C0J8 1336 aaKnown RBP10.49□□□□□ -0.73
LSM3P5-201ENST00000566307 MAGEB6P1A0A0J9YX57 407 aa10.48□□□□□ -0.73
LSM3P5-201ENST00000566307 WTIPA6NIX2 430 aaPredicted RBP10.48□□□□□ -0.73
LSM3P5-201ENST00000566307 PFKFB2O60825 505 aa10.48□□□□□ -0.73
LSM3P5-201ENST00000566307 UFL1O94874 794 aa10.48□□□□□ -0.73
LSM3P5-201ENST00000566307 MCM5P33992 734 aa10.48□□□□□ -0.73
LSM3P5-201ENST00000566307 GSTO1P78417 241 aa10.48□□□□□ -0.73
LSM3P5-201ENST00000566307 EN1Q05925 392 aaPredicted RBP10.48□□□□□ -0.73
LSM3P5-201ENST00000566307 ST3GAL1Q11201 340 aa10.48□□□□□ -0.73
LSM3P5-201ENST00000566307 GRIPAP1Q4V328 841 aa10.48□□□□□ -0.73
LSM3P5-201ENST00000566307 CC2D2BQ6DHV5 1058 aa10.48□□□□□ -0.73
LSM3P5-201ENST00000566307 TTLL5Q6EMB2 1281 aa10.48□□□□□ -0.73
LSM3P5-201ENST00000566307 NAA16Q6N069 864 aaPredicted RBP10.48□□□□□ -0.73
LSM3P5-201ENST00000566307 Q6ZUG5 572 aa10.48□□□□□ -0.73
LSM3P5-201ENST00000566307 LCORLQ8N3X6 602 aa10.48□□□□□ -0.73
LSM3P5-201ENST00000566307 TBC1D22AQ8WUA7 517 aa10.48□□□□□ -0.73
LSM3P5-201ENST00000566307 GTF3C6Q969F1 213 aa10.48□□□□□ -0.73
LSM3P5-201ENST00000566307 COA1Q9GZY4 146 aa10.48□□□□□ -0.73
LSM3P5-201ENST00000566307 NAPBQ9H115 298 aa10.48□□□□□ -0.73
LSM3P5-201ENST00000566307 CNNM2Q9H8M5 875 aa10.48□□□□□ -0.73
LSM3P5-201ENST00000566307 EPB41L4AQ9HCS5 686 aaPredicted RBP10.48□□□□□ -0.73
LSM3P5-201ENST00000566307 CD209Q9NNX6 404 aa10.48□□□□□ -0.73
LSM3P5-201ENST00000566307 RAI14Q9P0K7 980 aa10.48□□□□□ -0.73
LSM3P5-201ENST00000566307 ABCF2Q9UG63 623 aa10.48□□□□□ -0.73
LSM3P5-201ENST00000566307 NSFL1CQ9UNZ2 370 aaKnown RBP10.48□□□□□ -0.73
LSM3P5-201ENST00000566307 SMC3Q9UQE7 1217 aa10.48□□□□□ -0.73
LSM3P5-201ENST00000566307 ZDHHC9Q9Y397 364 aa10.48□□□□□ -0.73
LSM3P5-201ENST00000566307 DLEC1Q9Y238 1755 aa10.47□□□□□ -0.73
LSM3P5-201ENST00000566307 LARGE1O95461 756 aa10.47□□□□□ -0.73
LSM3P5-201ENST00000566307 LDHCP07864 332 aa10.47□□□□□ -0.73
LSM3P5-201ENST00000566307 FGRP09769 529 aa10.47□□□□□ -0.73
LSM3P5-201ENST00000566307 PDCP20941 246 aa10.47□□□□□ -0.73
LSM3P5-201ENST00000566307 PPP4CP60510 307 aa10.47□□□□□ -0.73
LSM3P5-201ENST00000566307 TRDNQ13061 729 aa10.47□□□□□ -0.73
LSM3P5-201ENST00000566307 RALYLQ86SE5 291 aaKnown RBP10.47□□□□□ -0.73
LSM3P5-201ENST00000566307 ZNF579Q8NAF0 562 aaKnown RBP10.47□□□□□ -0.73
LSM3P5-201ENST00000566307 ZNF384Q8TF68 577 aa10.47□□□□□ -0.73
LSM3P5-201ENST00000566307 STAG1Q8WVM7 1258 aa10.47□□□□□ -0.73
LSM3P5-201ENST00000566307 FAM163AQ96GL9 167 aaPredicted RBP10.47□□□□□ -0.73
LSM3P5-201ENST00000566307 TMEM87BQ96K49 555 aa10.47□□□□□ -0.73
LSM3P5-201ENST00000566307 KRT23Q9C075 422 aa10.47□□□□□ -0.73
LSM3P5-201ENST00000566307 NBPF3Q9H094 633 aa10.47□□□□□ -0.73
LSM3P5-201ENST00000566307 RNF41Q9H4P4 317 aaPredicted RBP10.47□□□□□ -0.73
LSM3P5-201ENST00000566307 ARMT1Q9H993 441 aa10.47□□□□□ -0.73
LSM3P5-201ENST00000566307 ATP8A2Q9NTI2 1148 aa10.47□□□□□ -0.73
LSM3P5-201ENST00000566307 POLLQ9UGP5 575 aa10.47□□□□□ -0.73
LSM3P5-201ENST00000566307 C10orf71Q711Q0 1435 aa10.47□□□□□ -0.73
LSM3P5-201ENST00000566307 CHD4Q14839 1912 aa10.46□□□□□ -0.73
LSM3P5-201ENST00000566307 GOLGA6L22H0YM25 854 aa10.46□□□□□ -0.73
LSM3P5-201ENST00000566307 BAG4O95429 457 aaKnown RBP10.46□□□□□ -0.73
LSM3P5-201ENST00000566307 LDHBP07195 334 aaKnown RBP10.46□□□□□ -0.73
LSM3P5-201ENST00000566307 RCAN1P53805 252 aa10.46□□□□□ -0.73
LSM3P5-201ENST00000566307 MECOMQ03112 1051 aa10.46□□□□□ -0.73
LSM3P5-201ENST00000566307 COL9A3Q14050 684 aaPredicted RBP10.46□□□□□ -0.73
LSM3P5-201ENST00000566307 SKOR2Q2VWA4 1001 aaPredicted RBP10.46□□□□□ -0.73
LSM3P5-201ENST00000566307 SBK1Q52WX2 424 aa10.46□□□□□ -0.73
LSM3P5-201ENST00000566307 AKNAD1Q5T1N1 836 aa10.46□□□□□ -0.73
LSM3P5-201ENST00000566307 ADGRA1Q86SQ6 560 aa10.46□□□□□ -0.73
LSM3P5-201ENST00000566307 TBC1D10CQ8IV04 446 aa10.46□□□□□ -0.73
LSM3P5-201ENST00000566307 CCDC83Q8IWF9 413 aa10.46□□□□□ -0.73
LSM3P5-201ENST00000566307 SMARCC2Q8TAQ2 1214 aa10.46□□□□□ -0.73
LSM3P5-201ENST00000566307 BRF1Q92994 677 aa10.46□□□□□ -0.73
LSM3P5-201ENST00000566307 CNKSR1Q969H4 720 aa10.46□□□□□ -0.73
LSM3P5-201ENST00000566307 EYA3Q99504 573 aa10.46□□□□□ -0.73
LSM3P5-201ENST00000566307 RTFDC1Q9BY42 306 aaPredicted RBP10.46□□□□□ -0.73
LSM3P5-201ENST00000566307 IQSEC3Q9UPP2 1182 aaPredicted RBP10.46□□□□□ -0.73
LSM3P5-201ENST00000566307 SLC4A4Q9Y6R1 1079 aa10.46□□□□□ -0.73
LSM3P5-201ENST00000566307 NID2Q14112 1375 aa10.46□□□□□ -0.74
LSM3P5-201ENST00000566307 SNED1Q8TER0 1413 aa10.46□□□□□ -0.74
LSM3P5-201ENST00000566307 KIF13BQ9NQT8 1826 aa10.45□□□□□ -0.74
LSM3P5-201ENST00000566307 A0A0G2JLW4 131 aa10.45□□□□□ -0.74
LSM3P5-201ENST00000566307 H0YIN7 160 aa10.45□□□□□ -0.74
LSM3P5-201ENST00000566307 PRC1O43663 620 aa10.45□□□□□ -0.74
LSM3P5-201ENST00000566307 APPP05067 770 aa10.45□□□□□ -0.74
LSM3P5-201ENST00000566307 PRDX5P30044 214 aa10.45□□□□□ -0.74
LSM3P5-201ENST00000566307 LIFRP42702 1097 aa10.45□□□□□ -0.74
LSM3P5-201ENST00000566307 ANTXR2P58335 489 aa10.45□□□□□ -0.74
LSM3P5-201ENST00000566307 FKBP1AP62942 108 aaKnown RBP10.45□□□□□ -0.74
LSM3P5-201ENST00000566307 HMGN5P82970 282 aaKnown RBP10.45□□□□□ -0.74
LSM3P5-201ENST00000566307 NOL8Q76FK4 1167 aaKnown RBP10.45□□□□□ -0.74
LSM3P5-201ENST00000566307 SGMS1Q86VZ5 419 aa10.45□□□□□ -0.74
LSM3P5-201ENST00000566307 SLF2Q8IX21 1173 aa10.45□□□□□ -0.74
LSM3P5-201ENST00000566307 MPNDQ8N594 471 aa10.45□□□□□ -0.74
LSM3P5-201ENST00000566307 CRNKL1Q9BZJ0 848 aaKnown RBP10.45□□□□□ -0.74
LSM3P5-201ENST00000566307 TMX4Q9H1E5 349 aaPredicted RBP10.45□□□□□ -0.74
LSM3P5-201ENST00000566307 KIF3AQ9Y496 699 aa10.45□□□□□ -0.74
LSM3P5-201ENST00000566307 GAKO14976 1311 aa10.44□□□□□ -0.74
LSM3P5-201ENST00000566307 STX6O43752 255 aa10.44□□□□□ -0.74
LSM3P5-201ENST00000566307 BAG3O95817 575 aa10.44□□□□□ -0.74
LSM3P5-201ENST00000566307 CHRM1P11229 460 aaPredicted RBP10.44□□□□□ -0.74
LSM3P5-201ENST00000566307 SYT1P21579 422 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms