RNA–Protein interactions for RNA: ENST00000566249.5

KARS-206, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 5

Gene KARS, Length 649 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-206ENST00000566249 CCDC86Q9H6F5 360 aaKnown RBP9.18□□□□□ -0.94
KARS-206ENST00000566249 PCDHGB7Q9Y5F8 929 aa9.18□□□□□ -0.94
KARS-206ENST00000566249 F8W735 103 aaPredicted RBP9.17□□□□□ -0.94
KARS-206ENST00000566249 LIG1P18858 919 aa9.17□□□□□ -0.94
KARS-206ENST00000566249 TFE3P19532 575 aaPredicted RBP9.17□□□□□ -0.94
KARS-206ENST00000566249 AGGF1Q8N302 714 aaeCLIP9.17□□□□□ -0.94
KARS-206ENST00000566249 DCAF5Q96JK2 942 aa9.17□□□□□ -0.94
KARS-206ENST00000566249 KRT82Q9NSB4 513 aa9.17□□□□□ -0.94
KARS-206ENST00000566249 PCDHB5Q9Y5E4 795 aa9.17□□□□□ -0.94
KARS-206ENST00000566249 KRBA1A5PL33 1030 aa9.16□□□□□ -0.94
KARS-206ENST00000566249 TRIM37O94972 964 aa9.16□□□□□ -0.94
KARS-206ENST00000566249 ALX3O95076 343 aa9.16□□□□□ -0.94
KARS-206ENST00000566249 NRG1Q02297 640 aaPredicted RBP9.16□□□□□ -0.94
KARS-206ENST00000566249 EXOSC6Q5RKV6 272 aaKnown RBP9.16□□□□□ -0.94
KARS-206ENST00000566249 TMEM130Q8N3G9 435 aa9.16□□□□□ -0.94
KARS-206ENST00000566249 GPBAR1Q8TDU6 330 aa9.16□□□□□ -0.94
KARS-206ENST00000566249 ACSBG1Q96GR2 724 aa9.16□□□□□ -0.94
KARS-206ENST00000566249 RHOVQ96L33 236 aa9.16□□□□□ -0.94
KARS-206ENST00000566249 RNF208Q9H0X6 261 aa9.16□□□□□ -0.94
KARS-206ENST00000566249 ZNF862O60290 1169 aa9.15□□□□□ -0.94
KARS-206ENST00000566249 PF4P02776 101 aa9.15□□□□□ -0.94
KARS-206ENST00000566249 ERCC5P28715 1186 aaPredicted RBP9.15□□□□□ -0.94
KARS-206ENST00000566249 HNRNPUQ00839 825 aaKnown RBP eCLIP9.15□□□□□ -0.94
KARS-206ENST00000566249 LMNB2Q03252 620 aa9.15□□□□□ -0.94
KARS-206ENST00000566249 FAM160A1Q05DH4 1040 aa9.15□□□□□ -0.94
KARS-206ENST00000566249 KCNMA1Q12791 1236 aa9.15□□□□□ -0.94
KARS-206ENST00000566249 CAMK2GQ13555 558 aaPredicted RBP9.15□□□□□ -0.94
KARS-206ENST00000566249 SEPT6Q14141 434 aa9.15□□□□□ -0.94
KARS-206ENST00000566249 WDR89Q96FK6 387 aaPredicted RBP9.15□□□□□ -0.94
KARS-206ENST00000566249 TMPRSS13Q9BYE2 586 aa9.15□□□□□ -0.94
KARS-206ENST00000566249 MIR1-1HGQ9H1L0 117 aa9.15□□□□□ -0.94
KARS-206ENST00000566249 AKTIPQ9H8T0 292 aa9.15□□□□□ -0.94
KARS-206ENST00000566249 RAD18Q9NS91 495 aa9.15□□□□□ -0.94
KARS-206ENST00000566249 MEGF11A6BM72 1044 aa9.14□□□□□ -0.95
KARS-206ENST00000566249 IREB2P48200 963 aaKnown RBP9.14□□□□□ -0.95
KARS-206ENST00000566249 RASSF7Q02833 373 aa9.14□□□□□ -0.95
KARS-206ENST00000566249 MBTPS1Q14703 1052 aa9.14□□□□□ -0.95
KARS-206ENST00000566249 NUTM2GQ5VZR2 741 aa9.14□□□□□ -0.95
KARS-206ENST00000566249 SCARA3Q6AZY7 606 aa9.14□□□□□ -0.95
KARS-206ENST00000566249 WFDC12Q8WWY7 111 aa9.14□□□□□ -0.95
KARS-206ENST00000566249 DDX41Q9UJV9 622 aaKnown RBP9.14□□□□□ -0.95
KARS-206ENST00000566249 AOC2O75106 756 aa9.13□□□□□ -0.95
KARS-206ENST00000566249 EIF4A3P38919 411 aaKnown RBP9.13□□□□□ -0.95
KARS-206ENST00000566249 RACK1P63244 317 aaKnown RBP9.13□□□□□ -0.95
KARS-206ENST00000566249 RAD51AP2Q09MP3 1159 aa9.13□□□□□ -0.95
KARS-206ENST00000566249 ADGRE1Q14246 886 aa9.13□□□□□ -0.95
KARS-206ENST00000566249 KIF4BQ2VIQ3 1234 aa9.13□□□□□ -0.95
KARS-206ENST00000566249 AKAP4Q5JQC9 854 aa9.13□□□□□ -0.95
KARS-206ENST00000566249 SNAP47Q5SQN1 464 aa9.13□□□□□ -0.95
KARS-206ENST00000566249 TRIM42Q8IWZ5 723 aa9.13□□□□□ -0.95
KARS-206ENST00000566249 ZNF654Q8IZM8 581 aa9.13□□□□□ -0.95
KARS-206ENST00000566249 JARID2Q92833 1246 aaPredicted RBP9.13□□□□□ -0.95
KARS-206ENST00000566249 GAL3ST3Q96A11 431 aa9.13□□□□□ -0.95
KARS-206ENST00000566249 WDR18Q9BV38 432 aa9.13□□□□□ -0.95
KARS-206ENST00000566249 CYP4F12Q9HCS2 524 aa9.13□□□□□ -0.95
KARS-206ENST00000566249 CACNA2D2Q9NY47 1150 aa9.13□□□□□ -0.95
KARS-206ENST00000566249 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.13□□□□□ -0.95
KARS-206ENST00000566249 GLB1P16278 677 aa9.12□□□□□ -0.95
KARS-206ENST00000566249 NOS3P29474 1203 aa9.12□□□□□ -0.95
KARS-206ENST00000566249 CHRNA4P43681 627 aa9.12□□□□□ -0.95
KARS-206ENST00000566249 GSK3AP49840 483 aa9.12□□□□□ -0.95
KARS-206ENST00000566249 PTPN11Q06124 597 aaPredicted RBP9.12□□□□□ -0.95
KARS-206ENST00000566249 FDX2Q6P4F2 183 aa9.12□□□□□ -0.95
KARS-206ENST00000566249 GOLM1Q8NBJ4 401 aa9.12□□□□□ -0.95
KARS-206ENST00000566249 TGIF2Q9GZN2 237 aa9.12□□□□□ -0.95
KARS-206ENST00000566249 CCSER2Q9H7U1 834 aa9.12□□□□□ -0.95
KARS-206ENST00000566249 ADAMTS1Q9UHI8 967 aa9.12□□□□□ -0.95
KARS-206ENST00000566249 PCDHA4Q9UN74 947 aa9.12□□□□□ -0.95
KARS-206ENST00000566249 C1QTNF9BB2RNN3 333 aa9.11□□□□□ -0.95
KARS-206ENST00000566249 SLFN14P0C7P3 912 aa9.11□□□□□ -0.95
KARS-206ENST00000566249 GARTP22102 1010 aa9.11□□□□□ -0.95
KARS-206ENST00000566249 FBXL19Q6PCT2 694 aa9.11□□□□□ -0.95
KARS-206ENST00000566249 BNC2Q6ZN30 1099 aaPredicted RBP9.11□□□□□ -0.95
KARS-206ENST00000566249 CD163Q86VB7 1156 aa9.11□□□□□ -0.95
KARS-206ENST00000566249 C12orf50Q8NA57 414 aaPredicted RBP9.11□□□□□ -0.95
KARS-206ENST00000566249 SMG8Q8ND04 991 aaKnown RBP9.11□□□□□ -0.95
KARS-206ENST00000566249 ZNF296Q8WUU4 475 aaPredicted RBP9.11□□□□□ -0.95
KARS-206ENST00000566249 SPON2Q9BUD6 331 aa9.11□□□□□ -0.95
KARS-206ENST00000566249 SUGCTQ9HAC7 445 aa9.11□□□□□ -0.95
KARS-206ENST00000566249 DIEXFQ68CQ4 756 aaKnown RBP9.1□□□□□ -0.95
KARS-206ENST00000566249 ANKRD34AQ69YU3 496 aa9.1□□□□□ -0.95
KARS-206ENST00000566249 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.1□□□□□ -0.95
KARS-206ENST00000566249 CCDC84Q86UT8 332 aaPredicted RBP9.1□□□□□ -0.95
KARS-206ENST00000566249 TXNRD3Q86VQ6 643 aa9.1□□□□□ -0.95
KARS-206ENST00000566249 KIAA0825Q8IV33 1275 aa9.1□□□□□ -0.95
KARS-206ENST00000566249 SUPT16HQ9Y5B9 1047 aaKnown RBP9.1□□□□□ -0.95
KARS-206ENST00000566249 GDF11O95390 407 aa9.09□□□□□ -0.95
KARS-206ENST00000566249 F13A1P00488 732 aa9.09□□□□□ -0.95
KARS-206ENST00000566249 ADH5P11766 374 aa9.09□□□□□ -0.95
KARS-206ENST00000566249 SOX4Q06945 474 aaPredicted RBP9.09□□□□□ -0.95
KARS-206ENST00000566249 Q6ZS46 218 aa9.09□□□□□ -0.95
KARS-206ENST00000566249 CEP41Q9BYV8 373 aa9.09□□□□□ -0.95
KARS-206ENST00000566249 ACBD3Q9H3P7 528 aa9.09□□□□□ -0.95
KARS-206ENST00000566249 KCNQ5Q9NR82 932 aa9.09□□□□□ -0.95
KARS-206ENST00000566249 AP4E1Q9UPM8 1137 aa9.09□□□□□ -0.95
KARS-206ENST00000566249 SYNGAP1Q96PV0 1343 aa9.08□□□□□ -0.96
KARS-206ENST00000566249 SART1O43290 800 aaKnown RBP9.08□□□□□ -0.96
KARS-206ENST00000566249 DRD2P14416 443 aa9.08□□□□□ -0.96
KARS-206ENST00000566249 ID3Q02535 119 aa9.08□□□□□ -0.96
KARS-206ENST00000566249 TMEM151AQ8N4L1 468 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms