RNA–Protein interactions for RNA: ENST00000566016.5

SHCBP1-205, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 1 (best)

Gene SHCBP1, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-205ENST00000566016 IDH1O75874 414 aaKnown RBP25.61■■□□□ 1.69
SHCBP1-205ENST00000566016 MX1P20591 662 aa25.61■■□□□ 1.69
SHCBP1-205ENST00000566016 TNNI2P48788 182 aa25.61■■□□□ 1.69
SHCBP1-205ENST00000566016 CDC42EP5Q6NZY7 148 aa25.61■■□□□ 1.69
SHCBP1-205ENST00000566016 DLK2Q6UY11 383 aa25.61■■□□□ 1.69
SHCBP1-205ENST00000566016 FAM83AQ86UY5 434 aa25.61■■□□□ 1.69
SHCBP1-205ENST00000566016 DNAJC2Q99543 621 aaKnown RBP25.61■■□□□ 1.69
SHCBP1-205ENST00000566016 PAG1Q9NWQ8 432 aa25.61■■□□□ 1.69
SHCBP1-205ENST00000566016 SCAF8Q9UPN6 1271 aaKnown RBP25.61■■□□□ 1.69
SHCBP1-205ENST00000566016 RPAP1Q9BWH6 1393 aaPredicted RBP25.61■■□□□ 1.69
SHCBP1-205ENST00000566016 GOLIM4O00461 696 aa25.6■■□□□ 1.69
SHCBP1-205ENST00000566016 NUCB1Q02818 461 aa25.6■■□□□ 1.69
SHCBP1-205ENST00000566016 ERC2O15083 957 aa25.6■■□□□ 1.69
SHCBP1-205ENST00000566016 BTDP43251 543 aa25.6■■□□□ 1.69
SHCBP1-205ENST00000566016 RASA3Q14644 834 aa25.6■■□□□ 1.69
SHCBP1-205ENST00000566016 ZNF408Q9H9D4 720 aa25.6■■□□□ 1.69
SHCBP1-205ENST00000566016 GLRX3O76003 335 aaKnown RBP25.59■■□□□ 1.69
SHCBP1-205ENST00000566016 NF2P35240 595 aa25.59■■□□□ 1.69
SHCBP1-205ENST00000566016 FKBP1BP68106 108 aa25.59■■□□□ 1.69
SHCBP1-205ENST00000566016 CHD1LQ86WJ1 897 aa25.59■■□□□ 1.69
SHCBP1-205ENST00000566016 OTUD7AQ8TE49 926 aaPredicted RBP25.59■■□□□ 1.69
SHCBP1-205ENST00000566016 STAP2Q9UGK3 403 aa25.59■■□□□ 1.69
SHCBP1-205ENST00000566016 CNTNAP1P78357 1384 aa25.59■■□□□ 1.69
SHCBP1-205ENST00000566016 PI4K2BQ8TCG2 481 aa25.58■■□□□ 1.69
SHCBP1-205ENST00000566016 IDI2Q9BXS1 227 aa25.58■■□□□ 1.69
SHCBP1-205ENST00000566016 LNPKQ9C0E8 428 aa25.58■■□□□ 1.69
SHCBP1-205ENST00000566016 GBA2Q9HCG7 927 aaPredicted RBP25.58■■□□□ 1.69
SHCBP1-205ENST00000566016 USP40Q9NVE5 1235 aa25.58■■□□□ 1.69
SHCBP1-205ENST00000566016 TLL2Q9Y6L7 1015 aa25.58■■□□□ 1.69
SHCBP1-205ENST00000566016 SSC5DA1L4H1 1573 aa25.58■■□□□ 1.68
SHCBP1-205ENST00000566016 TCP10L2B9ZVM9 353 aa25.57■■□□□ 1.68
SHCBP1-205ENST00000566016 CACNB3P54284 484 aa25.57■■□□□ 1.68
SHCBP1-205ENST00000566016 RHBDL3P58872 404 aa25.57■■□□□ 1.68
SHCBP1-205ENST00000566016 AK9Q5TCS8 1911 aa25.57■■□□□ 1.68
SHCBP1-205ENST00000566016 SAPCD2Q86UD0 394 aa25.57■■□□□ 1.68
SHCBP1-205ENST00000566016 CERS3Q8IU89 383 aa25.57■■□□□ 1.68
SHCBP1-205ENST00000566016 HHIPL1Q96JK4 782 aa25.57■■□□□ 1.68
SHCBP1-205ENST00000566016 NPM3O75607 178 aaKnown RBP25.56■■□□□ 1.68
SHCBP1-205ENST00000566016 PLCG2P16885 1265 aa25.56■■□□□ 1.68
SHCBP1-205ENST00000566016 PPP4CP60510 307 aa25.56■■□□□ 1.68
SHCBP1-205ENST00000566016 HTRA3P83110 453 aa25.56■■□□□ 1.68
SHCBP1-205ENST00000566016 TSHZ3Q63HK5 1081 aa25.56■■□□□ 1.68
SHCBP1-205ENST00000566016 B4GALNT3Q6L9W6 998 aa25.56■■□□□ 1.68
SHCBP1-205ENST00000566016 MAGEB6Q8N7X4 407 aa25.56■■□□□ 1.68
SHCBP1-205ENST00000566016 C2orf69Q8N8R5 385 aa25.56■■□□□ 1.68
SHCBP1-205ENST00000566016 EDC3Q96F86 508 aaKnown RBP25.56■■□□□ 1.68
SHCBP1-205ENST00000566016 TEPSINQ96N21 525 aa25.56■■□□□ 1.68
SHCBP1-205ENST00000566016 NOL10Q9BSC4 688 aaKnown RBP25.56■■□□□ 1.68
SHCBP1-205ENST00000566016 RASSF10A6NK89 507 aa25.55■■□□□ 1.68
SHCBP1-205ENST00000566016 BAG3O95817 575 aa25.55■■□□□ 1.68
SHCBP1-205ENST00000566016 SUPT20HL1Q3ZLR7 823 aa25.55■■□□□ 1.68
SHCBP1-205ENST00000566016 PRAMEF18Q5VWM3 479 aa25.55■■□□□ 1.68
SHCBP1-205ENST00000566016 ADGRA1Q86SQ6 560 aa25.55■■□□□ 1.68
SHCBP1-205ENST00000566016 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.55■■□□□ 1.68
SHCBP1-205ENST00000566016 ABT1Q9ULW3 272 aaKnown RBP25.55■■□□□ 1.68
SHCBP1-205ENST00000566016 WDHD1O75717 1129 aaPredicted RBP25.54■■□□□ 1.68
SHCBP1-205ENST00000566016 NEFLP07196 543 aa25.54■■□□□ 1.68
SHCBP1-205ENST00000566016 CYP7A1P22680 504 aa25.54■■□□□ 1.68
SHCBP1-205ENST00000566016 PDE1AP54750 535 aa25.54■■□□□ 1.68
SHCBP1-205ENST00000566016 NFIAQ12857 509 aa25.54■■□□□ 1.68
SHCBP1-205ENST00000566016 FAM151AQ8WW52 585 aa25.54■■□□□ 1.68
SHCBP1-205ENST00000566016 ENTPD3O75355 529 aa25.53■■□□□ 1.68
SHCBP1-205ENST00000566016 PDE6AP16499 860 aa25.53■■□□□ 1.68
SHCBP1-205ENST00000566016 SLC9C2Q5TAH2 1124 aa25.53■■□□□ 1.68
SHCBP1-205ENST00000566016 TMEM39BQ9GZU3 492 aa25.53■■□□□ 1.68
SHCBP1-205ENST00000566016 FAM198AQ9UFP1 575 aa25.53■■□□□ 1.68
SHCBP1-205ENST00000566016 COL2A1P02458 1487 aaPredicted RBP25.53■■□□□ 1.68
SHCBP1-205ENST00000566016 PCNTO95613 3336 aa25.53■■□□□ 1.68
SHCBP1-205ENST00000566016 DNAJC5GQ8N7S2 189 aa25.53■■□□□ 1.68
SHCBP1-205ENST00000566016 NBPF12Q5TAG4 269 aaPredicted RBP25.52■■□□□ 1.68
SHCBP1-205ENST00000566016 KBTBD3Q8NAB2 608 aa25.52■■□□□ 1.68
SHCBP1-205ENST00000566016 HOOK2Q96ED9 719 aa25.52■■□□□ 1.68
SHCBP1-205ENST00000566016 AATFQ9NY61 560 aaKnown RBP eCLIP25.52■■□□□ 1.68
SHCBP1-205ENST00000566016 OTOFQ9HC10 1997 aa25.51■■□□□ 1.67
SHCBP1-205ENST00000566016 TCRBV5S4A2TA0A5A2 114 aa25.51■■□□□ 1.67
SHCBP1-205ENST00000566016 ADD2P35612 726 aa25.51■■□□□ 1.67
SHCBP1-205ENST00000566016 RGS3P49796 1198 aa25.51■■□□□ 1.67
SHCBP1-205ENST00000566016 OSBPL3Q9H4L5 887 aa25.51■■□□□ 1.67
SHCBP1-205ENST00000566016 THSD7BQ9C0I4 1608 aa25.5■■□□□ 1.67
SHCBP1-205ENST00000566016 PPP1R12BO60237 982 aaPredicted RBP25.5■■□□□ 1.67
SHCBP1-205ENST00000566016 HUNKP57058 714 aa25.5■■□□□ 1.67
SHCBP1-205ENST00000566016 MAP3K11Q16584 847 aa25.5■■□□□ 1.67
SHCBP1-205ENST00000566016 ZSCAN25Q6NSZ9 544 aa25.5■■□□□ 1.67
SHCBP1-205ENST00000566016 ATRNL1Q5VV63 1379 aa25.5■■□□□ 1.67
SHCBP1-205ENST00000566016 ZNF532Q9HCE3 1301 aa25.49■■□□□ 1.67
SHCBP1-205ENST00000566016 UBE3CQ15386 1083 aa25.49■■□□□ 1.67
SHCBP1-205ENST00000566016 DEFB115Q30KQ5 88 aa25.49■■□□□ 1.67
SHCBP1-205ENST00000566016 CDAN1Q8IWY9 1227 aa25.49■■□□□ 1.67
SHCBP1-205ENST00000566016 TEX11Q8IYF3 940 aa25.49■■□□□ 1.67
SHCBP1-205ENST00000566016 KLRG1Q96E93 195 aa25.49■■□□□ 1.67
SHCBP1-205ENST00000566016 UNCXA6NJT0 531 aa25.48■■□□□ 1.67
SHCBP1-205ENST00000566016 TCP10Q12799 353 aa25.48■■□□□ 1.67
SHCBP1-205ENST00000566016 ARMC9Q7Z3E5 817 aa25.48■■□□□ 1.67
SHCBP1-205ENST00000566016 SH3RF3Q8TEJ3 882 aaPredicted RBP25.48■■□□□ 1.67
SHCBP1-205ENST00000566016 DDX4Q9NQI0 724 aaKnown RBP25.48■■□□□ 1.67
SHCBP1-205ENST00000566016 MYH1P12882 1939 aa25.48■■□□□ 1.67
SHCBP1-205ENST00000566016 LRRFIP1Q32MZ4 808 aaKnown RBP25.47■■□□□ 1.67
SHCBP1-205ENST00000566016 PLEKHM2Q8IWE5 1019 aa25.47■■□□□ 1.67
SHCBP1-205ENST00000566016 RIOK1Q9BRS2 568 aaKnown RBP25.47■■□□□ 1.67
SHCBP1-205ENST00000566016 DDX60LQ5H9U9 1706 aaKnown RBP25.47■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms