RNA–Protein interactions for RNA: ENST00000565834.1

COMMD4-213, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-213ENST00000565834 PPP4CP60510 307 aa22.33■■□□□ 1.17
COMMD4-213ENST00000565834 KRT32Q14532 448 aa22.33■■□□□ 1.17
COMMD4-213ENST00000565834 IPO9Q96P70 1041 aaKnown RBP22.33■■□□□ 1.17
COMMD4-213ENST00000565834 NAPBQ9H115 298 aa22.33■■□□□ 1.17
COMMD4-213ENST00000565834 EPB41L4AQ9HCS5 686 aaPredicted RBP22.33■■□□□ 1.17
COMMD4-213ENST00000565834 BAZ2AQ9UIF9 1905 aaKnown RBP22.33■■□□□ 1.17
COMMD4-213ENST00000565834 GPR75-ASB3A0A0A6YYF3 556 aa22.33■■□□□ 1.16
COMMD4-213ENST00000565834 RAD17O75943 681 aa22.33■■□□□ 1.16
COMMD4-213ENST00000565834 BTDP43251 543 aa22.33■■□□□ 1.16
COMMD4-213ENST00000565834 KIAA0825Q8IV33 1275 aa22.33■■□□□ 1.16
COMMD4-213ENST00000565834 SDR42E1Q8WUS8 393 aa22.33■■□□□ 1.16
COMMD4-213ENST00000565834 JAKMIP1Q96N16 626 aaKnown RBP22.33■■□□□ 1.16
COMMD4-213ENST00000565834 MYO3BQ8WXR4 1341 aa22.33■■□□□ 1.16
COMMD4-213ENST00000565834 CDK5RAP2Q96SN8 1893 aa22.32■■□□□ 1.16
COMMD4-213ENST00000565834 ADAMTSL1Q8N6G6 1762 aa22.32■■□□□ 1.16
COMMD4-213ENST00000565834 TDO2P48775 406 aa22.32■■□□□ 1.16
COMMD4-213ENST00000565834 BECN1Q14457 450 aa22.32■■□□□ 1.16
COMMD4-213ENST00000565834 DAGLAQ9Y4D2 1042 aa22.32■■□□□ 1.16
COMMD4-213ENST00000565834 TAF6LQ9Y6J9 622 aa22.32■■□□□ 1.16
COMMD4-213ENST00000565834 PSMD14O00487 310 aa22.31■■□□□ 1.16
COMMD4-213ENST00000565834 PLCG2P16885 1265 aa22.31■■□□□ 1.16
COMMD4-213ENST00000565834 PSMA5P28066 241 aa22.31■■□□□ 1.16
COMMD4-213ENST00000565834 SCNN1DP51172 638 aa22.31■■□□□ 1.16
COMMD4-213ENST00000565834 ADCK5Q3MIX3 580 aa22.31■■□□□ 1.16
COMMD4-213ENST00000565834 RSBN1LQ6PCB5 846 aaPredicted RBP22.31■■□□□ 1.16
COMMD4-213ENST00000565834 ARHGAP27Q6ZUM4 889 aa22.31■■□□□ 1.16
COMMD4-213ENST00000565834 TEKT1Q969V4 418 aa22.31■■□□□ 1.16
COMMD4-213ENST00000565834 TM6SF1Q9BZW5 370 aa22.31■■□□□ 1.16
COMMD4-213ENST00000565834 ZNF213O14771 459 aa22.3■■□□□ 1.16
COMMD4-213ENST00000565834 ST18O60284 1047 aa22.3■■□□□ 1.16
COMMD4-213ENST00000565834 VIL1P09327 827 aaKnown RBP22.3■■□□□ 1.16
COMMD4-213ENST00000565834 CASTP20810 708 aaKnown RBP22.3■■□□□ 1.16
COMMD4-213ENST00000565834 NEK4P51957 841 aa22.3■■□□□ 1.16
COMMD4-213ENST00000565834 GIMAP6Q6P9H5 292 aa22.3■■□□□ 1.16
COMMD4-213ENST00000565834 HHIPL2Q6UWX4 724 aa22.3■■□□□ 1.16
COMMD4-213ENST00000565834 SH3RF3Q8TEJ3 882 aaPredicted RBP22.3■■□□□ 1.16
COMMD4-213ENST00000565834 UPF3BQ9BZI7 483 aaKnown RBP22.3■■□□□ 1.16
COMMD4-213ENST00000565834 DICER1Q9UPY3 1922 aaKnown RBP22.3■■□□□ 1.16
COMMD4-213ENST00000565834 HAND2P61296 217 aa22.3■■□□□ 1.16
COMMD4-213ENST00000565834 HDLBPQ00341 1268 aaKnown RBP22.3■■□□□ 1.16
COMMD4-213ENST00000565834 IL27Q8NEV9 243 aa22.3■■□□□ 1.16
COMMD4-213ENST00000565834 SNX21Q969T3 373 aa22.3■■□□□ 1.16
COMMD4-213ENST00000565834 MRIQ9BWK5 157 aa22.3■■□□□ 1.16
COMMD4-213ENST00000565834 ATP8A2Q9NTI2 1148 aa22.3■■□□□ 1.16
COMMD4-213ENST00000565834 NAV1Q8NEY1 1877 aa22.29■■□□□ 1.16
COMMD4-213ENST00000565834 HSCBQ8IWL3 235 aa22.29■■□□□ 1.16
COMMD4-213ENST00000565834 SBF1O95248 1867 aa22.28■■□□□ 1.16
COMMD4-213ENST00000565834 FOCADQ5VW36 1801 aa22.28■■□□□ 1.16
COMMD4-213ENST00000565834 CRKP46108 304 aa22.28■■□□□ 1.16
COMMD4-213ENST00000565834 PRELPP51888 382 aa22.28■■□□□ 1.16
COMMD4-213ENST00000565834 CXCL9Q07325 125 aa22.28■■□□□ 1.16
COMMD4-213ENST00000565834 CIAPIN1Q6FI81 312 aa22.28■■□□□ 1.16
COMMD4-213ENST00000565834 ZSWIM6Q9HCJ5 1215 aa22.28■■□□□ 1.16
COMMD4-213ENST00000565834 CYP46A1Q9Y6A2 500 aa22.28■■□□□ 1.16
COMMD4-213ENST00000565834 LAMB1P07942 1786 aa22.28■■□□□ 1.16
COMMD4-213ENST00000565834 E7EWF7 191 aa22.27■■□□□ 1.16
COMMD4-213ENST00000565834 USP5P45974 858 aa22.27■■□□□ 1.16
COMMD4-213ENST00000565834 TBC1D2Q9BYX2 928 aa22.27■■□□□ 1.16
COMMD4-213ENST00000565834 DCP1AQ9NPI6 582 aaPredicted RBP22.27■■□□□ 1.16
COMMD4-213ENST00000565834 DAXXQ9UER7 740 aaPredicted RBP22.27■■□□□ 1.16
COMMD4-213ENST00000565834 ECM29Q5VYK3 1845 aa22.27■■□□□ 1.16
COMMD4-213ENST00000565834 TNIP1Q15025 636 aa22.26■■□□□ 1.15
COMMD4-213ENST00000565834 BLOC1S2Q6QNY1 142 aa22.26■■□□□ 1.15
COMMD4-213ENST00000565834 STOX1Q6ZVD7 989 aa22.26■■□□□ 1.15
COMMD4-213ENST00000565834 TEX11Q8IYF3 940 aa22.26■■□□□ 1.15
COMMD4-213ENST00000565834 ZDHHC15Q96MV8 337 aa22.26■■□□□ 1.15
COMMD4-213ENST00000565834 NEK1Q96PY6 1258 aa22.26■■□□□ 1.15
COMMD4-213ENST00000565834 SERPINA10Q9UK55 444 aa22.26■■□□□ 1.15
COMMD4-213ENST00000565834 TIAM2Q8IVF5 1701 aa22.26■■□□□ 1.15
COMMD4-213ENST00000565834 CD2BP2O95400 341 aaKnown RBP22.26■■□□□ 1.15
COMMD4-213ENST00000565834 RHBDL3P58872 404 aa22.26■■□□□ 1.15
COMMD4-213ENST00000565834 RUFY3Q7L099 469 aa22.26■■□□□ 1.15
COMMD4-213ENST00000565834 AGBL3Q8NEM8 1001 aa22.26■■□□□ 1.15
COMMD4-213ENST00000565834 GMLQ99445 158 aa22.26■■□□□ 1.15
COMMD4-213ENST00000565834 CPA1P15085 419 aa22.25■■□□□ 1.15
COMMD4-213ENST00000565834 YBX3P16989 372 aaKnown RBP eCLIP22.25■■□□□ 1.15
COMMD4-213ENST00000565834 LMNB1P20700 586 aa22.25■■□□□ 1.15
COMMD4-213ENST00000565834 RBM5P52756 815 aaKnown RBP eCLIP22.25■■□□□ 1.15
COMMD4-213ENST00000565834 HMGB1P09429 215 aaKnown RBP22.24■■□□□ 1.15
COMMD4-213ENST00000565834 EIF6P56537 245 aaKnown RBP22.24■■□□□ 1.15
COMMD4-213ENST00000565834 TGFBRAP1Q8WUH2 860 aa22.24■■□□□ 1.15
COMMD4-213ENST00000565834 NBPF3Q9H094 633 aa22.24■■□□□ 1.15
COMMD4-213ENST00000565834 HDAC9Q9UKV0 1011 aa22.24■■□□□ 1.15
COMMD4-213ENST00000565834 ZBTB12Q9Y330 459 aaPredicted RBP22.24■■□□□ 1.15
COMMD4-213ENST00000565834 FZD9O00144 591 aa22.23■■□□□ 1.15
COMMD4-213ENST00000565834 PPARAQ07869 468 aa22.23■■□□□ 1.15
COMMD4-213ENST00000565834 APOBEC3HQ6NTF7 200 aaKnown RBP22.23■■□□□ 1.15
COMMD4-213ENST00000565834 TBC1D10CQ8IV04 446 aa22.23■■□□□ 1.15
COMMD4-213ENST00000565834 ARPP21Q9UBL0 812 aaPredicted RBP22.23■■□□□ 1.15
COMMD4-213ENST00000565834 MYH1P12882 1939 aa22.23■■□□□ 1.15
COMMD4-213ENST00000565834 MINDY4BA8MYZ0 360 aa22.23■■□□□ 1.15
COMMD4-213ENST00000565834 RPS6KB1P23443 525 aa22.23■■□□□ 1.15
COMMD4-213ENST00000565834 CTDSPL2Q05D32 466 aa22.23■■□□□ 1.15
COMMD4-213ENST00000565834 CTR9Q6PD62 1173 aa22.23■■□□□ 1.15
COMMD4-213ENST00000565834 OGFOD1Q8N543 542 aa22.23■■□□□ 1.15
COMMD4-213ENST00000565834 TTC14Q96N46 770 aa22.23■■□□□ 1.15
COMMD4-213ENST00000565834 PDRG1Q9NUG6 133 aa22.23■■□□□ 1.15
COMMD4-213ENST00000565834 USP40Q9NVE5 1235 aa22.23■■□□□ 1.15
COMMD4-213ENST00000565834 MKRN1Q9UHC7 482 aaKnown RBP22.23■■□□□ 1.15
COMMD4-213ENST00000565834 DDX60LQ5H9U9 1706 aaKnown RBP22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms