RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 KCNK4Q9NYG8 393 aa6.39□□□□□ -1.39
LINC00561-201ENST00000565815 LOC105371045A0A1W2PR82 267 aa6.39□□□□□ -1.39
LINC00561-201ENST00000565815 SLURP2P0DP57 97 aa6.39□□□□□ -1.39
LINC00561-201ENST00000565815 SELPP16109 830 aa6.39□□□□□ -1.39
LINC00561-201ENST00000565815 DNAJA1P31689 397 aaKnown RBP6.39□□□□□ -1.39
LINC00561-201ENST00000565815 TTBK2Q6IQ55 1244 aa6.39□□□□□ -1.39
LINC00561-201ENST00000565815 SLC16A10Q8TF71 515 aa6.39□□□□□ -1.39
LINC00561-201ENST00000565815 ABCA8O94911 1581 aa6.38□□□□□ -1.39
LINC00561-201ENST00000565815 OIP5O43482 229 aa6.38□□□□□ -1.39
LINC00561-201ENST00000565815 DEAF1O75398 565 aaPredicted RBP6.38□□□□□ -1.39
LINC00561-201ENST00000565815 PAK2Q13177 524 aa6.38□□□□□ -1.39
LINC00561-201ENST00000565815 ZNF385CQ66K41 422 aaPredicted RBP6.38□□□□□ -1.39
LINC00561-201ENST00000565815 AVENQ9NQS1 362 aaPredicted RBP6.38□□□□□ -1.39
LINC00561-201ENST00000565815 CFAP74Q9C0B2 1584 aa6.38□□□□□ -1.39
LINC00561-201ENST00000565815 RAPGEF2Q9Y4G8 1499 aa6.38□□□□□ -1.39
LINC00561-201ENST00000565815 DLL1O00548 723 aa6.38□□□□□ -1.39
LINC00561-201ENST00000565815 B3GALT4O96024 378 aa6.38□□□□□ -1.39
LINC00561-201ENST00000565815 PF4P02776 101 aa6.38□□□□□ -1.39
LINC00561-201ENST00000565815 LORP23490 312 aaPredicted RBP6.38□□□□□ -1.39
LINC00561-201ENST00000565815 LIG3P49916 1009 aa6.38□□□□□ -1.39
LINC00561-201ENST00000565815 SVOPQ8N4V2 548 aa6.38□□□□□ -1.39
LINC00561-201ENST00000565815 PHC3Q8NDX5 983 aa6.38□□□□□ -1.39
LINC00561-201ENST00000565815 KLHDC7BQ96G42 594 aa6.38□□□□□ -1.39
LINC00561-201ENST00000565815 BTBD6Q96KE9 485 aa6.38□□□□□ -1.39
LINC00561-201ENST00000565815 RHOVQ96L33 236 aa6.38□□□□□ -1.39
LINC00561-201ENST00000565815 EFCC1Q9HA90 598 aa6.38□□□□□ -1.39
LINC00561-201ENST00000565815 FANCAO15360 1455 aa6.37□□□□□ -1.39
LINC00561-201ENST00000565815 MAGI2Q86UL8 1455 aa6.37□□□□□ -1.39
LINC00561-201ENST00000565815 ABCA9Q8IUA7 1624 aa6.37□□□□□ -1.39
LINC00561-201ENST00000565815 TLR3O15455 904 aaKnown RBP6.37□□□□□ -1.39
LINC00561-201ENST00000565815 NID1P14543 1247 aa6.37□□□□□ -1.39
LINC00561-201ENST00000565815 DGKGP49619 791 aa6.37□□□□□ -1.39
LINC00561-201ENST00000565815 ST13P50502 369 aaKnown RBP6.37□□□□□ -1.39
LINC00561-201ENST00000565815 MAP1SQ66K74 1059 aaPredicted RBP6.37□□□□□ -1.39
LINC00561-201ENST00000565815 TRIM11Q96F44 468 aa6.37□□□□□ -1.39
LINC00561-201ENST00000565815 RBSNQ9H1K0 784 aa6.37□□□□□ -1.39
LINC00561-201ENST00000565815 CCSER2Q9H7U1 834 aa6.37□□□□□ -1.39
LINC00561-201ENST00000565815 METTL5Q9NRN9 209 aaKnown RBP6.37□□□□□ -1.39
LINC00561-201ENST00000565815 SPATA31D1Q6ZQQ2 1576 aa6.37□□□□□ -1.39
LINC00561-201ENST00000565815 WISP1O95388 367 aa6.37□□□□□ -1.39
LINC00561-201ENST00000565815 BMP6P22004 513 aa6.37□□□□□ -1.39
LINC00561-201ENST00000565815 ZC3H6P61129 1189 aaKnown RBP6.37□□□□□ -1.39
LINC00561-201ENST00000565815 IKBKEQ14164 716 aa6.37□□□□□ -1.39
LINC00561-201ENST00000565815 FOXD4L6Q3SYB3 417 aaPredicted RBP6.37□□□□□ -1.39
LINC00561-201ENST00000565815 FOXD4L3Q6VB84 417 aaPredicted RBP6.37□□□□□ -1.39
LINC00561-201ENST00000565815 GOLM1Q8NBJ4 401 aa6.37□□□□□ -1.39
LINC00561-201ENST00000565815 NRSN2Q9GZP1 204 aa6.37□□□□□ -1.39
LINC00561-201ENST00000565815 LILRB5O75023 590 aa6.36□□□□□ -1.39
LINC00561-201ENST00000565815 PTPRAP18433 802 aa6.36□□□□□ -1.39
LINC00561-201ENST00000565815 PTPN12Q05209 780 aaKnown RBP6.36□□□□□ -1.39
LINC00561-201ENST00000565815 SETDB1Q15047 1291 aa6.36□□□□□ -1.39
LINC00561-201ENST00000565815 AKNAQ7Z591 1439 aa6.36□□□□□ -1.39
LINC00561-201ENST00000565815 JARID2Q92833 1246 aaPredicted RBP6.36□□□□□ -1.39
LINC00561-201ENST00000565815 EAF1Q96JC9 268 aaPredicted RBP6.36□□□□□ -1.39
LINC00561-201ENST00000565815 RRAGCQ9HB90 399 aa6.36□□□□□ -1.39
LINC00561-201ENST00000565815 CBX8Q9HC52 389 aa6.36□□□□□ -1.39
LINC00561-201ENST00000565815 PTPRTO14522 1441 aa6.36□□□□□ -1.39
LINC00561-201ENST00000565815 GARTP22102 1010 aa6.36□□□□□ -1.39
LINC00561-201ENST00000565815 FGD1P98174 961 aa6.36□□□□□ -1.39
LINC00561-201ENST00000565815 GSTM4Q03013 218 aa6.36□□□□□ -1.39
LINC00561-201ENST00000565815 CCDC81Q6ZN84 652 aa6.36□□□□□ -1.39
LINC00561-201ENST00000565815 GAL3ST3Q96A11 431 aa6.36□□□□□ -1.39
LINC00561-201ENST00000565815 FRMD6Q96NE9 622 aa6.36□□□□□ -1.39
LINC00561-201ENST00000565815 TGIF2Q9GZN2 237 aa6.36□□□□□ -1.39
LINC00561-201ENST00000565815 GDF2Q9UK05 429 aaPredicted RBP6.36□□□□□ -1.39
LINC00561-201ENST00000565815 GIPC1O14908 333 aa6.35□□□□□ -1.39
LINC00561-201ENST00000565815 F13A1P00488 732 aa6.35□□□□□ -1.39
LINC00561-201ENST00000565815 PDZD3Q86UT5 571 aa6.35□□□□□ -1.39
LINC00561-201ENST00000565815 SULF2Q8IWU5 870 aa6.35□□□□□ -1.39
LINC00561-201ENST00000565815 ADAM19Q9H013 955 aa6.35□□□□□ -1.39
LINC00561-201ENST00000565815 NSFL1CQ9UNZ2 370 aaKnown RBP6.35□□□□□ -1.39
LINC00561-201ENST00000565815 INPP5FQ9Y2H2 1132 aa6.35□□□□□ -1.39
LINC00561-201ENST00000565815 ARHGEF40Q8TER5 1519 aa6.35□□□□□ -1.39
LINC00561-201ENST00000565815 ALAS2P22557 587 aa6.35□□□□□ -1.39
LINC00561-201ENST00000565815 CDC27P30260 824 aa6.35□□□□□ -1.39
LINC00561-201ENST00000565815 MSL1Q68DK7 614 aa6.35□□□□□ -1.39
LINC00561-201ENST00000565815 SHISA2Q6UWI4 295 aa6.35□□□□□ -1.39
LINC00561-201ENST00000565815 DHX38Q92620 1227 aaKnown RBP6.35□□□□□ -1.39
LINC00561-201ENST00000565815 TMEM74Q96NL1 305 aa6.35□□□□□ -1.39
LINC00561-201ENST00000565815 TMEM39AQ9NV64 488 aa6.35□□□□□ -1.39
LINC00561-201ENST00000565815 EFCAB5A4FU69 1503 aa6.35□□□□□ -1.39
LINC00561-201ENST00000565815 MADDQ8WXG6 1647 aa6.35□□□□□ -1.39
LINC00561-201ENST00000565815 YEATS2Q9ULM3 1422 aa6.35□□□□□ -1.39
LINC00561-201ENST00000565815 BCRP11274 1271 aa6.34□□□□□ -1.39
LINC00561-201ENST00000565815 EIF4A3P38919 411 aaKnown RBP6.34□□□□□ -1.39
LINC00561-201ENST00000565815 UBASH3BQ8TF42 649 aa6.34□□□□□ -1.39
LINC00561-201ENST00000565815 ZNF296Q8WUU4 475 aaPredicted RBP6.34□□□□□ -1.39
LINC00561-201ENST00000565815 DNAJC2Q99543 621 aaKnown RBP6.34□□□□□ -1.39
LINC00561-201ENST00000565815 FRRS1LQ9P0K9 344 aa6.34□□□□□ -1.39
LINC00561-201ENST00000565815 FHOD3Q2V2M9 1422 aa6.34□□□□□ -1.39
LINC00561-201ENST00000565815 FSCN2O14926 492 aa6.34□□□□□ -1.39
LINC00561-201ENST00000565815 CAMK2GQ13555 558 aaPredicted RBP6.34□□□□□ -1.39
LINC00561-201ENST00000565815 ANKRD24Q8TF21 1146 aa6.34□□□□□ -1.39
LINC00561-201ENST00000565815 SPON2Q9BUD6 331 aa6.34□□□□□ -1.39
LINC00561-201ENST00000565815 NOC4LQ9BVI4 516 aaKnown RBP6.34□□□□□ -1.39
LINC00561-201ENST00000565815 PPME1Q9Y570 386 aa6.34□□□□□ -1.39
LINC00561-201ENST00000565815 MRVI1Q9Y6F6 885 aa6.34□□□□□ -1.39
LINC00561-201ENST00000565815 H3BRJ5 948 aa6.34□□□□□ -1.4
LINC00561-201ENST00000565815 GRIN3BO60391 1043 aa6.34□□□□□ -1.4
LINC00561-201ENST00000565815 PPT2Q9UMR5 302 aa6.34□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms