RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 HPS5Q9UPZ3 1129 aa18.58■□□□□ 0.56
SPG7-210ENST00000564409 DAGLAQ9Y4D2 1042 aa18.58■□□□□ 0.56
SPG7-210ENST00000564409 PRDX5P30044 214 aa18.57■□□□□ 0.56
SPG7-210ENST00000564409 ZKSCAN2Q63HK3 967 aa18.57■□□□□ 0.56
SPG7-210ENST00000564409 ERO1BQ86YB8 467 aa18.57■□□□□ 0.56
SPG7-210ENST00000564409 ERO1AQ96HE7 468 aa18.57■□□□□ 0.56
SPG7-210ENST00000564409 R3HDMLQ9H3Y0 253 aa18.57■□□□□ 0.56
SPG7-210ENST00000564409 SPDYE5A6NIY4 337 aa18.56■□□□□ 0.56
SPG7-210ENST00000564409 WDHD1O75717 1129 aaPredicted RBP18.56■□□□□ 0.56
SPG7-210ENST00000564409 DIEXFQ68CQ4 756 aaKnown RBP18.56■□□□□ 0.56
SPG7-210ENST00000564409 CDC42EP5Q6NZY7 148 aa18.56■□□□□ 0.56
SPG7-210ENST00000564409 WRNIP1Q96S55 665 aa18.56■□□□□ 0.56
SPG7-210ENST00000564409 ZNF341Q9BYN7 854 aa18.56■□□□□ 0.56
SPG7-210ENST00000564409 ZCCHC17Q9NP64 241 aaKnown RBP18.56■□□□□ 0.56
SPG7-210ENST00000564409 A0A1B0GUL7 405 aa18.55■□□□□ 0.56
SPG7-210ENST00000564409 TIMM10P62072 90 aa18.55■□□□□ 0.56
SPG7-210ENST00000564409 HNRNPUQ00839 825 aaKnown RBP eCLIP18.55■□□□□ 0.56
SPG7-210ENST00000564409 TFCP2Q12800 502 aa18.55■□□□□ 0.56
SPG7-210ENST00000564409 CRHR2Q13324 411 aa18.55■□□□□ 0.56
SPG7-210ENST00000564409 DIXDC1Q155Q3 683 aa18.55■□□□□ 0.56
SPG7-210ENST00000564409 FAM163AQ96GL9 167 aaPredicted RBP18.55■□□□□ 0.56
SPG7-210ENST00000564409 XAGE2Q96GT9 111 aa18.55■□□□□ 0.56
SPG7-210ENST00000564409 PTPN18Q99952 460 aa18.55■□□□□ 0.56
SPG7-210ENST00000564409 CETPP11597 493 aa18.54■□□□□ 0.56
SPG7-210ENST00000564409 ADORA1P30542 326 aa18.54■□□□□ 0.56
SPG7-210ENST00000564409 G3BP1Q13283 466 aaKnown RBP eCLIP18.54■□□□□ 0.56
SPG7-210ENST00000564409 RASGRF1Q13972 1273 aa18.54■□□□□ 0.56
SPG7-210ENST00000564409 OTUD5Q96G74 571 aa18.54■□□□□ 0.56
SPG7-210ENST00000564409 USP40Q9NVE5 1235 aa18.54■□□□□ 0.56
SPG7-210ENST00000564409 SNCAIPQ9Y6H5 919 aa18.54■□□□□ 0.56
SPG7-210ENST00000564409 GAKO14976 1311 aa18.53■□□□□ 0.56
SPG7-210ENST00000564409 CCL15-CCL14A0A0B4J2E2 113 aa18.53■□□□□ 0.56
SPG7-210ENST00000564409 PPATQ06203 517 aa18.53■□□□□ 0.56
SPG7-210ENST00000564409 PPIL2Q13356 520 aa18.53■□□□□ 0.56
SPG7-210ENST00000564409 ARHGEF6Q15052 776 aa18.53■□□□□ 0.56
SPG7-210ENST00000564409 CCL15Q16663 113 aa18.53■□□□□ 0.56
SPG7-210ENST00000564409 DZIP1Q86YF9 867 aaKnown RBP18.53■□□□□ 0.56
SPG7-210ENST00000564409 MIER1Q8N108 512 aa18.53■□□□□ 0.56
SPG7-210ENST00000564409 BRI3BPQ8WY22 251 aa18.53■□□□□ 0.56
SPG7-210ENST00000564409 CLUAP1Q96AJ1 413 aa18.53■□□□□ 0.56
SPG7-210ENST00000564409 IDI2Q9BXS1 227 aa18.53■□□□□ 0.56
SPG7-210ENST00000564409 ZFYVE28Q9HCC9 887 aa18.53■□□□□ 0.56
SPG7-210ENST00000564409 ZNF112Q9UJU3 913 aa18.53■□□□□ 0.56
SPG7-210ENST00000564409 ENTPD3O75355 529 aa18.52■□□□□ 0.56
SPG7-210ENST00000564409 MAP4K4O95819 1239 aaPredicted RBP18.52■□□□□ 0.56
SPG7-210ENST00000564409 SP3Q02447 781 aa18.52■□□□□ 0.56
SPG7-210ENST00000564409 SNAPC2Q13487 334 aa18.52■□□□□ 0.56
SPG7-210ENST00000564409 GORABQ5T7V8 394 aa18.52■□□□□ 0.56
SPG7-210ENST00000564409 ABCF2Q9UG63 623 aa18.52■□□□□ 0.56
SPG7-210ENST00000564409 TCP10Q12799 353 aa18.51■□□□□ 0.55
SPG7-210ENST00000564409 TAF1CQ15572 869 aaPredicted RBP18.51■□□□□ 0.55
SPG7-210ENST00000564409 OTOP1Q7RTM1 612 aa18.51■□□□□ 0.55
SPG7-210ENST00000564409 TMEM57Q8N5G2 664 aa18.51■□□□□ 0.55
SPG7-210ENST00000564409 CNKSR2Q8WXI2 1034 aa18.51■□□□□ 0.55
SPG7-210ENST00000564409 ZKSCAN4Q969J2 545 aaPredicted RBP18.51■□□□□ 0.55
SPG7-210ENST00000564409 NEUROD6Q96NK8 337 aa18.51■□□□□ 0.55
SPG7-210ENST00000564409 FAM198AQ9UFP1 575 aa18.51■□□□□ 0.55
SPG7-210ENST00000564409 TRIM17Q9Y577 477 aa18.51■□□□□ 0.55
SPG7-210ENST00000564409 PDE4DIPQ5VU43 2346 aa18.5■□□□□ 0.55
SPG7-210ENST00000564409 PNMA6EA0A0J9YXQ4 647 aa18.5■□□□□ 0.55
SPG7-210ENST00000564409 LDHCP07864 332 aa18.5■□□□□ 0.55
SPG7-210ENST00000564409 UQCRFS1P1P0C7P4 283 aa18.5■□□□□ 0.55
SPG7-210ENST00000564409 SOX10P56693 466 aa18.5■□□□□ 0.55
SPG7-210ENST00000564409 NFIAQ12857 509 aa18.5■□□□□ 0.55
SPG7-210ENST00000564409 ERICH6Q7L0X2 663 aa18.5■□□□□ 0.55
SPG7-210ENST00000564409 MIGA2Q7L4E1 593 aa18.5■□□□□ 0.55
SPG7-210ENST00000564409 FTSJ3Q8IY81 847 aaKnown RBP18.5■□□□□ 0.55
SPG7-210ENST00000564409 GPR108Q9NPR9 543 aa18.5■□□□□ 0.55
SPG7-210ENST00000564409 DOCK2Q92608 1830 aa18.5■□□□□ 0.55
SPG7-210ENST00000564409 IRF6O14896 467 aa18.49■□□□□ 0.55
SPG7-210ENST00000564409 IGSF3O75054 1194 aa18.49■□□□□ 0.55
SPG7-210ENST00000564409 NPM3O75607 178 aaKnown RBP18.49■□□□□ 0.55
SPG7-210ENST00000564409 ARID4AP29374 1257 aaPredicted RBP18.49■□□□□ 0.55
SPG7-210ENST00000564409 GSTO1P78417 241 aa18.49■□□□□ 0.55
SPG7-210ENST00000564409 NOL9Q5SY16 702 aaKnown RBP18.49■□□□□ 0.55
SPG7-210ENST00000564409 SPATA5Q8NB90 893 aa18.49■□□□□ 0.55
SPG7-210ENST00000564409 SSH3Q8TE77 659 aa18.49■□□□□ 0.55
SPG7-210ENST00000564409 EFCC1Q9HA90 598 aa18.49■□□□□ 0.55
SPG7-210ENST00000564409 TNNQ9UQP3 1299 aa18.49■□□□□ 0.55
SPG7-210ENST00000564409 ZBED9Q6R2W3 1325 aa18.49■□□□□ 0.55
SPG7-210ENST00000564409 ATP8B2P98198 1209 aa18.48■□□□□ 0.55
SPG7-210ENST00000564409 POLA2Q14181 598 aa18.48■□□□□ 0.55
SPG7-210ENST00000564409 HMG20BQ9P0W2 317 aa18.48■□□□□ 0.55
SPG7-210ENST00000564409 MROH7-TTC4A0A0A0MT08 1334 aa18.48■□□□□ 0.55
SPG7-210ENST00000564409 RFX7Q2KHR2 1363 aa18.47■□□□□ 0.55
SPG7-210ENST00000564409 GPR75-ASB3A0A0A6YYF3 556 aa18.47■□□□□ 0.55
SPG7-210ENST00000564409 TLR2O60603 784 aa18.47■□□□□ 0.55
SPG7-210ENST00000564409 INPP5BP32019 993 aa18.47■□□□□ 0.55
SPG7-210ENST00000564409 RGS3P49796 1198 aa18.47■□□□□ 0.55
SPG7-210ENST00000564409 MAP3K10Q02779 954 aa18.47■□□□□ 0.55
SPG7-210ENST00000564409 MECOMQ03112 1051 aa18.47■□□□□ 0.55
SPG7-210ENST00000564409 FAM43AQ8N2R8 423 aa18.47■□□□□ 0.55
SPG7-210ENST00000564409 CD99L2Q8TCZ2 262 aa18.47■□□□□ 0.55
SPG7-210ENST00000564409 KCNH4Q9UQ05 1017 aa18.47■□□□□ 0.55
SPG7-210ENST00000564409 PTPN22Q9Y2R2 807 aa18.47■□□□□ 0.55
SPG7-210ENST00000564409 BTBD19C9JJ37 291 aa18.46■□□□□ 0.55
SPG7-210ENST00000564409 BTDP43251 543 aa18.46■□□□□ 0.55
SPG7-210ENST00000564409 ATRNL1Q5VV63 1379 aa18.45■□□□□ 0.54
SPG7-210ENST00000564409 CXCL11O14625 94 aa18.45■□□□□ 0.54
SPG7-210ENST00000564409 ZBTB7BO15156 539 aaPredicted RBP18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms