RNA–Protein interactions for RNA: ENST00000564354.1

AP000842.3-201, humanhuman

TSL 3 BASIC

Gene AP000842.3, Length 808 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000842.3-201ENST00000564354 NLRP12P59046 1061 aa9.8□□□□□ -0.84
AP000842.3-201ENST00000564354 MTMR3Q13615 1198 aa9.8□□□□□ -0.84
AP000842.3-201ENST00000564354 CCDC39Q9UFE4 941 aa9.8□□□□□ -0.84
AP000842.3-201ENST00000564354 LEMD3Q9Y2U8 911 aa9.8□□□□□ -0.84
AP000842.3-201ENST00000564354 CDK13Q14004 1512 aaKnown RBP9.8□□□□□ -0.84
AP000842.3-201ENST00000564354 ARHGEF12Q9NZN5 1544 aa9.79□□□□□ -0.84
AP000842.3-201ENST00000564354 A6NHS1 94 aa9.79□□□□□ -0.84
AP000842.3-201ENST00000564354 GAS2O43903 313 aaKnown RBP9.79□□□□□ -0.84
AP000842.3-201ENST00000564354 F13BP05160 661 aa9.79□□□□□ -0.84
AP000842.3-201ENST00000564354 SSFA2P28290 1259 aa9.79□□□□□ -0.84
AP000842.3-201ENST00000564354 EIF1AXP47813 144 aaKnown RBP9.79□□□□□ -0.84
AP000842.3-201ENST00000564354 SGO2Q562F6 1265 aa9.79□□□□□ -0.84
AP000842.3-201ENST00000564354 NFXL1Q6ZNB6 911 aa9.79□□□□□ -0.84
AP000842.3-201ENST00000564354 C14orf37Q86TY3 774 aa9.79□□□□□ -0.84
AP000842.3-201ENST00000564354 C1orf127Q8N9H9 656 aa9.79□□□□□ -0.84
AP000842.3-201ENST00000564354 GGNBP2Q9H3C7 697 aa9.79□□□□□ -0.84
AP000842.3-201ENST00000564354 ATG3Q9NT62 314 aa9.79□□□□□ -0.84
AP000842.3-201ENST00000564354 SETD1BQ9UPS6 1966 aaKnown RBP9.79□□□□□ -0.84
AP000842.3-201ENST00000564354 TMEM88BA6NKF7 163 aa9.78□□□□□ -0.84
AP000842.3-201ENST00000564354 NFKBIEO00221 500 aa9.78□□□□□ -0.84
AP000842.3-201ENST00000564354 PDGFAP04085 211 aa9.78□□□□□ -0.84
AP000842.3-201ENST00000564354 AFAP1Q8N556 730 aa9.78□□□□□ -0.84
AP000842.3-201ENST00000564354 SALL4Q9UJQ4 1053 aa9.78□□□□□ -0.84
AP000842.3-201ENST00000564354 EEA1Q15075 1411 aa9.78□□□□□ -0.84
AP000842.3-201ENST00000564354 MYO5CQ9NQX4 1742 aa9.78□□□□□ -0.84
AP000842.3-201ENST00000564354 STRCQ7RTU9 1775 aa9.78□□□□□ -0.84
AP000842.3-201ENST00000564354 MZF1P28698 734 aaPredicted RBP9.77□□□□□ -0.85
AP000842.3-201ENST00000564354 POU5F2Q8N7G0 328 aa9.77□□□□□ -0.85
AP000842.3-201ENST00000564354 KRTAP4-9Q9BYQ8 210 aa9.77□□□□□ -0.85
AP000842.3-201ENST00000564354 C1orf115Q9H7X2 142 aa9.77□□□□□ -0.85
AP000842.3-201ENST00000564354 CARNS1A5YM72 827 aa9.76□□□□□ -0.85
AP000842.3-201ENST00000564354 ALKBH2Q6NS38 261 aa9.76□□□□□ -0.85
AP000842.3-201ENST00000564354 VSIG10LQ86VR7 867 aa9.76□□□□□ -0.85
AP000842.3-201ENST00000564354 FBXL18Q96ME1 805 aa9.76□□□□□ -0.85
AP000842.3-201ENST00000564354 OSBPL1AQ9BXW6 950 aa9.76□□□□□ -0.85
AP000842.3-201ENST00000564354 SOX13Q9UN79 622 aa9.76□□□□□ -0.85
AP000842.3-201ENST00000564354 POLIQ9UNA4 740 aa9.76□□□□□ -0.85
AP000842.3-201ENST00000564354 MTMR7Q9Y216 660 aa9.76□□□□□ -0.85
AP000842.3-201ENST00000564354 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.76□□□□□ -0.85
AP000842.3-201ENST00000564354 ZNF518AQ6AHZ1 1483 aa9.76□□□□□ -0.85
AP000842.3-201ENST00000564354 ARHGAP5Q13017 1502 aa9.76□□□□□ -0.85
AP000842.3-201ENST00000564354 SPATA31D1Q6ZQQ2 1576 aa9.75□□□□□ -0.85
AP000842.3-201ENST00000564354 TIAF1O95411 115 aa9.75□□□□□ -0.85
AP000842.3-201ENST00000564354 ITGB5P18084 799 aa9.75□□□□□ -0.85
AP000842.3-201ENST00000564354 XKR5Q6UX68 686 aa9.75□□□□□ -0.85
AP000842.3-201ENST00000564354 FBXL6Q8N531 539 aa9.75□□□□□ -0.85
AP000842.3-201ENST00000564354 SLC7A3Q8WY07 619 aa9.75□□□□□ -0.85
AP000842.3-201ENST00000564354 ASIC4Q96FT7 647 aa9.75□□□□□ -0.85
AP000842.3-201ENST00000564354 TMPRSS13Q9BYE2 586 aa9.75□□□□□ -0.85
AP000842.3-201ENST00000564354 SUGCTQ9HAC7 445 aa9.75□□□□□ -0.85
AP000842.3-201ENST00000564354 DZANK1Q9NVP4 752 aa9.75□□□□□ -0.85
AP000842.3-201ENST00000564354 ABL1P00519 1130 aa9.74□□□□□ -0.85
AP000842.3-201ENST00000564354 C8AP07357 584 aa9.74□□□□□ -0.85
AP000842.3-201ENST00000564354 ACPPP15309 386 aa9.74□□□□□ -0.85
AP000842.3-201ENST00000564354 C19orf57Q0VDD7 668 aa9.74□□□□□ -0.85
AP000842.3-201ENST00000564354 SMG8Q8ND04 991 aaKnown RBP9.74□□□□□ -0.85
AP000842.3-201ENST00000564354 PTPRTO14522 1441 aa9.73□□□□□ -0.85
AP000842.3-201ENST00000564354 CLIP1P30622 1438 aa9.73□□□□□ -0.85
AP000842.3-201ENST00000564354 PDE2AO00408 941 aaPredicted RBP9.73□□□□□ -0.85
AP000842.3-201ENST00000564354 TRPA1O75762 1119 aa9.73□□□□□ -0.85
AP000842.3-201ENST00000564354 ARL4DP49703 201 aa9.73□□□□□ -0.85
AP000842.3-201ENST00000564354 HGSNATQ68CP4 663 aa9.73□□□□□ -0.85
AP000842.3-201ENST00000564354 PMEPA1Q969W9 287 aa9.73□□□□□ -0.85
AP000842.3-201ENST00000564354 METTL22Q9BUU2 404 aaPredicted RBP9.73□□□□□ -0.85
AP000842.3-201ENST00000564354 ANO2Q9NQ90 1003 aa9.73□□□□□ -0.85
AP000842.3-201ENST00000564354 KIF14Q15058 1648 aa9.73□□□□□ -0.85
AP000842.3-201ENST00000564354 FMN1Q68DA7 1419 aa9.73□□□□□ -0.85
AP000842.3-201ENST00000564354 C3P01024 1663 aa9.72□□□□□ -0.85
AP000842.3-201ENST00000564354 FAM13AO94988 1023 aa9.72□□□□□ -0.85
AP000842.3-201ENST00000564354 RXRBP28702 533 aa9.72□□□□□ -0.85
AP000842.3-201ENST00000564354 COL19A1Q14993 1142 aa9.72□□□□□ -0.85
AP000842.3-201ENST00000564354 NUTM2GQ5VZR2 741 aa9.72□□□□□ -0.85
AP000842.3-201ENST00000564354 SHISA5Q8N114 240 aa9.72□□□□□ -0.85
AP000842.3-201ENST00000564354 JUNBP17275 347 aaPredicted RBP9.71□□□□□ -0.86
AP000842.3-201ENST00000564354 C12orf50Q8NA57 414 aaPredicted RBP9.71□□□□□ -0.86
AP000842.3-201ENST00000564354 HHIPQ96QV1 700 aa9.71□□□□□ -0.86
AP000842.3-201ENST00000564354 CYP4F12Q9HCS2 524 aa9.71□□□□□ -0.86
AP000842.3-201ENST00000564354 TRAPPC8Q9Y2L5 1435 aa9.71□□□□□ -0.86
AP000842.3-201ENST00000564354 FAM95CA0A1B0GW59 222 aa9.7□□□□□ -0.86
AP000842.3-201ENST00000564354 PHACTR2O75167 634 aa9.7□□□□□ -0.86
AP000842.3-201ENST00000564354 FKBP4Q02790 459 aaKnown RBP eCLIP9.7□□□□□ -0.86
AP000842.3-201ENST00000564354 TP53INP2Q8IXH6 220 aa9.7□□□□□ -0.86
AP000842.3-201ENST00000564354 TMEM102Q8N9M5 508 aaPredicted RBP9.7□□□□□ -0.86
AP000842.3-201ENST00000564354 BSDC1Q9NW68 430 aaPredicted RBP9.7□□□□□ -0.86
AP000842.3-201ENST00000564354 TROQ12816 1431 aaPredicted RBP9.7□□□□□ -0.86
AP000842.3-201ENST00000564354 DIP2CQ9Y2E4 1556 aa9.7□□□□□ -0.86
AP000842.3-201ENST00000564354 LOC100289279A0A1B0GTE1 492 aa9.69□□□□□ -0.86
AP000842.3-201ENST00000564354 SOX1O00570 391 aaPredicted RBP9.69□□□□□ -0.86
AP000842.3-201ENST00000564354 KDM5CP41229 1560 aa9.69□□□□□ -0.86
AP000842.3-201ENST00000564354 PAOXQ6QHF9 649 aa9.69□□□□□ -0.86
AP000842.3-201ENST00000564354 OSMRQ99650 979 aa9.69□□□□□ -0.86
AP000842.3-201ENST00000564354 CHRDQ9H2X0 955 aa9.69□□□□□ -0.86
AP000842.3-201ENST00000564354 ABCA6Q8N139 1617 aa9.68□□□□□ -0.86
AP000842.3-201ENST00000564354 CNTLNQ9NXG0 1405 aa9.68□□□□□ -0.86
AP000842.3-201ENST00000564354 EREGO14944 169 aa9.68□□□□□ -0.86
AP000842.3-201ENST00000564354 TNFRSF21O75509 655 aa9.68□□□□□ -0.86
AP000842.3-201ENST00000564354 USP5P45974 858 aa9.68□□□□□ -0.86
AP000842.3-201ENST00000564354 ZNF211Q13398 564 aaPredicted RBP9.68□□□□□ -0.86
AP000842.3-201ENST00000564354 SF3B2Q13435 895 aaKnown RBP9.68□□□□□ -0.86
AP000842.3-201ENST00000564354 NFKBIBQ15653 356 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms