RNA–Protein interactions for RNA: ENST00000564252.1

NME3-206, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 599 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-206ENST00000564252 SEMA3EO15041 775 aa29.69■■■□□ 2.34
NME3-206ENST00000564252 ZBTB22O15209 634 aa29.69■■■□□ 2.34
NME3-206ENST00000564252 ZKSCAN4Q969J2 545 aaPredicted RBP29.69■■■□□ 2.34
NME3-206ENST00000564252 DENND2AQ9ULE3 1009 aa29.69■■■□□ 2.34
NME3-206ENST00000564252 LDHBP07195 334 aaKnown RBP29.68■■■□□ 2.34
NME3-206ENST00000564252 ADORA1P30542 326 aa29.68■■■□□ 2.34
NME3-206ENST00000564252 CDC42EP5Q6NZY7 148 aa29.68■■■□□ 2.34
NME3-206ENST00000564252 FAM151AQ8WW52 585 aa29.68■■■□□ 2.34
NME3-206ENST00000564252 GNAI3P08754 354 aa29.67■■■□□ 2.34
NME3-206ENST00000564252 SP3Q02447 781 aa29.67■■■□□ 2.34
NME3-206ENST00000564252 DCAF15Q66K64 600 aa29.67■■■□□ 2.34
NME3-206ENST00000564252 ERO1BQ86YB8 467 aa29.67■■■□□ 2.34
NME3-206ENST00000564252 CAP1Q01518 475 aa29.66■■■□□ 2.34
NME3-206ENST00000564252 CCDC102BQ68D86 513 aa29.66■■■□□ 2.34
NME3-206ENST00000564252 FAM43AQ8N2R8 423 aa29.66■■■□□ 2.34
NME3-206ENST00000564252 NFIAQ12857 509 aa29.65■■■□□ 2.34
NME3-206ENST00000564252 MTX1Q13505 466 aa29.65■■■□□ 2.34
NME3-206ENST00000564252 TAF1CQ15572 869 aaPredicted RBP29.65■■■□□ 2.34
NME3-206ENST00000564252 MIGA2Q7L4E1 593 aa29.65■■■□□ 2.34
NME3-206ENST00000564252 ZNF341Q9BYN7 854 aa29.65■■■□□ 2.34
NME3-206ENST00000564252 SRGAP3O43295 1099 aa29.64■■■□□ 2.34
NME3-206ENST00000564252 TCP10Q12799 353 aa29.64■■■□□ 2.34
NME3-206ENST00000564252 ZFYVE28Q9HCC9 887 aa29.64■■■□□ 2.34
NME3-206ENST00000564252 FAM198AQ9UFP1 575 aa29.64■■■□□ 2.34
NME3-206ENST00000564252 PTPN22Q9Y2R2 807 aa29.64■■■□□ 2.34
NME3-206ENST00000564252 IRF6O14896 467 aa29.63■■■□□ 2.33
NME3-206ENST00000564252 TRIM27P14373 513 aa29.63■■■□□ 2.33
NME3-206ENST00000564252 TIMM10P62072 90 aa29.63■■■□□ 2.33
NME3-206ENST00000564252 PPIL2Q13356 520 aa29.63■■■□□ 2.33
NME3-206ENST00000564252 EFCC1Q9HA90 598 aa29.63■■■□□ 2.33
NME3-206ENST00000564252 TNNQ9UQP3 1299 aa29.63■■■□□ 2.33
NME3-206ENST00000564252 CETPP11597 493 aa29.62■■■□□ 2.33
NME3-206ENST00000564252 INPP5BP32019 993 aa29.62■■■□□ 2.33
NME3-206ENST00000564252 RASGRF1Q13972 1273 aa29.62■■■□□ 2.33
NME3-206ENST00000564252 USP40Q9NVE5 1235 aa29.62■■■□□ 2.33
NME3-206ENST00000564252 MYH2Q9UKX2 1941 aa29.61■■■□□ 2.33
NME3-206ENST00000564252 IPO8O15397 1037 aaKnown RBP29.61■■■□□ 2.33
NME3-206ENST00000564252 TFCP2Q12800 502 aa29.61■■■□□ 2.33
NME3-206ENST00000564252 SNAPC2Q13487 334 aa29.61■■■□□ 2.33
NME3-206ENST00000564252 ZGPATQ8N5A5 531 aaKnown RBP29.61■■■□□ 2.33
NME3-206ENST00000564252 ZNF112Q9UJU3 913 aa29.61■■■□□ 2.33
NME3-206ENST00000564252 PDS5AQ29RF7 1337 aaKnown RBP29.61■■■□□ 2.33
NME3-206ENST00000564252 A0A1B0GUL7 405 aa29.6■■■□□ 2.33
NME3-206ENST00000564252 BCAR3O75815 825 aa29.6■■■□□ 2.33
NME3-206ENST00000564252 ATF7IPQ6VMQ6 1270 aa29.6■■■□□ 2.33
NME3-206ENST00000564252 ZCCHC17Q9NP64 241 aaKnown RBP29.6■■■□□ 2.33
NME3-206ENST00000564252 AK9Q5TCS8 1911 aa29.6■■■□□ 2.33
NME3-206ENST00000564252 BTBD19C9JJ37 291 aa29.59■■■□□ 2.33
NME3-206ENST00000564252 PPATQ06203 517 aa29.59■■■□□ 2.33
NME3-206ENST00000564252 XAGE2Q96GT9 111 aa29.59■■■□□ 2.33
NME3-206ENST00000564252 AKAP2Q9Y2D5 859 aa29.59■■■□□ 2.33
NME3-206ENST00000564252 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP29.59■■■□□ 2.33
NME3-206ENST00000564252 GAKO14976 1311 aa29.59■■■□□ 2.33
NME3-206ENST00000564252 BRCA2P51587 3418 aa29.58■■■□□ 2.33
NME3-206ENST00000564252 ZFPM1Q8IX07 1006 aa29.58■■■□□ 2.33
NME3-206ENST00000564252 RFX7Q2KHR2 1363 aa29.57■■■□□ 2.32
NME3-206ENST00000564252 FRAT1Q92837 279 aaPredicted RBP29.57■■■□□ 2.32
NME3-206ENST00000564252 ATRNL1Q5VV63 1379 aa29.56■■■□□ 2.32
NME3-206ENST00000564252 MKI67P46013 3256 aaKnown RBP29.56■■■□□ 2.32
NME3-206ENST00000564252 TLR2O60603 784 aa29.56■■■□□ 2.32
NME3-206ENST00000564252 SLC34A2O95436 690 aa29.56■■■□□ 2.32
NME3-206ENST00000564252 GNAI2P04899 355 aa29.56■■■□□ 2.32
NME3-206ENST00000564252 MVPQ14764 893 aaKnown RBP29.56■■■□□ 2.32
NME3-206ENST00000564252 IDI2Q9BXS1 227 aa29.56■■■□□ 2.32
NME3-206ENST00000564252 ABCF2Q9UG63 623 aa29.56■■■□□ 2.32
NME3-206ENST00000564252 DOCK2Q92608 1830 aa29.56■■■□□ 2.32
NME3-206ENST00000564252 NOL9Q5SY16 702 aaKnown RBP29.55■■■□□ 2.32
NME3-206ENST00000564252 DZIP1Q86YF9 867 aaKnown RBP29.55■■■□□ 2.32
NME3-206ENST00000564252 GOLGA6L2Q8N9W4 650 aaPredicted RBP29.55■■■□□ 2.32
NME3-206ENST00000564252 CLUAP1Q96AJ1 413 aa29.55■■■□□ 2.32
NME3-206ENST00000564252 ARMC5Q96C12 935 aa29.55■■■□□ 2.32
NME3-206ENST00000564252 RBBP6Q7Z6E9 1792 aaKnown RBP29.54■■■□□ 2.32
NME3-206ENST00000564252 WDHD1O75717 1129 aaPredicted RBP29.54■■■□□ 2.32
NME3-206ENST00000564252 RGS3P49796 1198 aa29.54■■■□□ 2.32
NME3-206ENST00000564252 FAM163AQ96GL9 167 aaPredicted RBP29.54■■■□□ 2.32
NME3-206ENST00000564252 KCNH4Q9UQ05 1017 aa29.54■■■□□ 2.32
NME3-206ENST00000564252 PNMA6EA0A0J9YXQ4 647 aa29.53■■■□□ 2.32
NME3-206ENST00000564252 POTEFA5A3E0 1075 aa29.53■■■□□ 2.32
NME3-206ENST00000564252 ENTPD3O75355 529 aa29.53■■■□□ 2.32
NME3-206ENST00000564252 ARHGEF6Q15052 776 aa29.53■■■□□ 2.32
NME3-206ENST00000564252 SPTY2D1Q68D10 685 aaPredicted RBP29.53■■■□□ 2.32
NME3-206ENST00000564252 ZSWIM8A7E2V4 1837 aa29.52■■■□□ 2.32
NME3-206ENST00000564252 PRPF38BQ5VTL8 546 aaKnown RBP29.52■■■□□ 2.32
NME3-206ENST00000564252 SLF2Q8IX21 1173 aa29.52■■■□□ 2.32
NME3-206ENST00000564252 NEUROD6Q96NK8 337 aa29.52■■■□□ 2.32
NME3-206ENST00000564252 MROH7-TTC4A0A0A0MT08 1334 aa29.51■■■□□ 2.32
NME3-206ENST00000564252 SH3BP5LQ7L8J4 393 aa29.51■■■□□ 2.31
NME3-206ENST00000564252 ANKRD23Q86SG2 305 aa29.51■■■□□ 2.31
NME3-206ENST00000564252 ZNF384Q8TF68 577 aa29.51■■■□□ 2.31
NME3-206ENST00000564252 PHF20L1A8MW92 1017 aa29.5■■■□□ 2.31
NME3-206ENST00000564252 BTDP43251 543 aa29.5■■■□□ 2.31
NME3-206ENST00000564252 MECOMQ03112 1051 aa29.5■■■□□ 2.31
NME3-206ENST00000564252 MOGSQ13724 837 aa29.5■■■□□ 2.31
NME3-206ENST00000564252 TMEM57Q8N5G2 664 aa29.5■■■□□ 2.31
NME3-206ENST00000564252 DDX4Q9NQI0 724 aaKnown RBP29.5■■■□□ 2.31
NME3-206ENST00000564252 HMG20BQ9P0W2 317 aa29.5■■■□□ 2.31
NME3-206ENST00000564252 PTCH2Q9Y6C5 1203 aa29.5■■■□□ 2.31
NME3-206ENST00000564252 LACTBP83111 547 aaPredicted RBP29.49■■■□□ 2.31
NME3-206ENST00000564252 ERICH6Q7L0X2 663 aa29.49■■■□□ 2.31
NME3-206ENST00000564252 ARHGAP39Q9C0H5 1083 aa29.49■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms