RNA–Protein interactions for RNA: ENST00000563781.5

HERPUD1-207, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 774 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-207ENST00000563781 USPL1Q5W0Q7 1092 aa6.6□□□□□ -1.35
HERPUD1-207ENST00000563781 USP17L2Q6R6M4 530 aa6.6□□□□□ -1.35
HERPUD1-207ENST00000563781 USP17L1Q7RTZ2 530 aa6.6□□□□□ -1.35
HERPUD1-207ENST00000563781 PI4KAP1Q8N8J0 262 aa6.6□□□□□ -1.35
HERPUD1-207ENST00000563781 FLAD1Q8NFF5 587 aa6.6□□□□□ -1.35
HERPUD1-207ENST00000563781 PLBD2Q8NHP8 589 aa6.6□□□□□ -1.35
HERPUD1-207ENST00000563781 VRTNQ9H8Y1 702 aa6.6□□□□□ -1.35
HERPUD1-207ENST00000563781 SCN7AQ01118 1682 aa6.6□□□□□ -1.35
HERPUD1-207ENST00000563781 ATP10DQ9P241 1426 aa6.59□□□□□ -1.35
HERPUD1-207ENST00000563781 ABCC4O15439 1325 aa6.59□□□□□ -1.35
HERPUD1-207ENST00000563781 PTPRCP08575 1304 aa6.59□□□□□ -1.35
HERPUD1-207ENST00000563781 F6X3S4 739 aa6.59□□□□□ -1.35
HERPUD1-207ENST00000563781 PLIN1O60240 522 aa6.59□□□□□ -1.35
HERPUD1-207ENST00000563781 ATG7O95352 703 aa6.59□□□□□ -1.35
HERPUD1-207ENST00000563781 MYCP01106 439 aaPredicted RBP6.59□□□□□ -1.35
HERPUD1-207ENST00000563781 IGKV5-2P06315 115 aa6.59□□□□□ -1.35
HERPUD1-207ENST00000563781 ADH1AP07327 375 aa6.59□□□□□ -1.35
HERPUD1-207ENST00000563781 TRIM27P14373 513 aa6.59□□□□□ -1.35
HERPUD1-207ENST00000563781 LMOD1P29536 600 aaPredicted RBP6.59□□□□□ -1.35
HERPUD1-207ENST00000563781 RRP1P56182 461 aaKnown RBP6.59□□□□□ -1.35
HERPUD1-207ENST00000563781 MRPL14Q6P1L8 145 aaKnown RBP6.59□□□□□ -1.35
HERPUD1-207ENST00000563781 KSR2Q6VAB6 950 aa6.59□□□□□ -1.35
HERPUD1-207ENST00000563781 ATF7IPQ6VMQ6 1270 aa6.59□□□□□ -1.35
HERPUD1-207ENST00000563781 KIF6Q6ZMV9 814 aa6.59□□□□□ -1.35
HERPUD1-207ENST00000563781 TRIM46Q7Z4K8 759 aa6.59□□□□□ -1.35
HERPUD1-207ENST00000563781 ARHGAP45Q92619 1136 aa6.59□□□□□ -1.35
HERPUD1-207ENST00000563781 AGBL1Q96MI9 1066 aa6.59□□□□□ -1.35
HERPUD1-207ENST00000563781 ISCA1Q9BUE6 129 aa6.59□□□□□ -1.35
HERPUD1-207ENST00000563781 MAP3K2Q9Y2U5 619 aa6.59□□□□□ -1.35
HERPUD1-207ENST00000563781 C4AP0C0L4 1744 aa6.59□□□□□ -1.36
HERPUD1-207ENST00000563781 QSER1Q2KHR3 1735 aa6.59□□□□□ -1.36
HERPUD1-207ENST00000563781 TMEM88BA6NKF7 163 aa6.58□□□□□ -1.36
HERPUD1-207ENST00000563781 DDX58O95786 925 aaKnown RBP6.58□□□□□ -1.36
HERPUD1-207ENST00000563781 RLBP1P12271 317 aa6.58□□□□□ -1.36
HERPUD1-207ENST00000563781 BMP1P13497 986 aa6.58□□□□□ -1.36
HERPUD1-207ENST00000563781 RFC4P35249 363 aa6.58□□□□□ -1.36
HERPUD1-207ENST00000563781 TCIRG1Q13488 830 aa6.58□□□□□ -1.36
HERPUD1-207ENST00000563781 BEND3Q5T5X7 828 aa6.58□□□□□ -1.36
HERPUD1-207ENST00000563781 C20orf194Q5TEA3 1177 aa6.58□□□□□ -1.36
HERPUD1-207ENST00000563781 TBC1D9BQ66K14 1250 aa6.58□□□□□ -1.36
HERPUD1-207ENST00000563781 B4GALNT3Q6L9W6 998 aa6.58□□□□□ -1.36
HERPUD1-207ENST00000563781 CLEC4GQ6UXB4 293 aa6.58□□□□□ -1.36
HERPUD1-207ENST00000563781 DNAAF4Q8WXU2 420 aa6.58□□□□□ -1.36
HERPUD1-207ENST00000563781 FRAT1Q92837 279 aaPredicted RBP6.58□□□□□ -1.36
HERPUD1-207ENST00000563781 TSEN34Q9BSV6 310 aaKnown RBP6.58□□□□□ -1.36
HERPUD1-207ENST00000563781 METTL22Q9BUU2 404 aaPredicted RBP6.58□□□□□ -1.36
HERPUD1-207ENST00000563781 API5Q9BZZ5 524 aaKnown RBP6.58□□□□□ -1.36
HERPUD1-207ENST00000563781 ATP13A2Q9NQ11 1180 aa6.58□□□□□ -1.36
HERPUD1-207ENST00000563781 MKRN1Q9UHC7 482 aaKnown RBP6.58□□□□□ -1.36
HERPUD1-207ENST00000563781 NOD1Q9Y239 953 aa6.58□□□□□ -1.36
HERPUD1-207ENST00000563781 BCORQ6W2J9 1755 aa6.58□□□□□ -1.36
HERPUD1-207ENST00000563781 CASZ1Q86V15 1759 aa6.58□□□□□ -1.36
HERPUD1-207ENST00000563781 PXDNLA1KZ92 1463 aa6.58□□□□□ -1.36
HERPUD1-207ENST00000563781 UBN2Q6ZU65 1347 aa6.57□□□□□ -1.36
HERPUD1-207ENST00000563781 UNCXA6NJT0 531 aa6.57□□□□□ -1.36
HERPUD1-207ENST00000563781 NEURL1BA8MQ27 555 aa6.57□□□□□ -1.36
HERPUD1-207ENST00000563781 ATP5J2-PTCD1G3V325 749 aa6.57□□□□□ -1.36
HERPUD1-207ENST00000563781 IPO8O15397 1037 aaKnown RBP6.57□□□□□ -1.36
HERPUD1-207ENST00000563781 ERCC3P19447 782 aa6.57□□□□□ -1.36
HERPUD1-207ENST00000563781 TM4SF1P30408 202 aa6.57□□□□□ -1.36
HERPUD1-207ENST00000563781 PTGIRP43119 386 aa6.57□□□□□ -1.36
HERPUD1-207ENST00000563781 RELBQ01201 579 aa6.57□□□□□ -1.36
HERPUD1-207ENST00000563781 DDR1Q08345 913 aa6.57□□□□□ -1.36
HERPUD1-207ENST00000563781 TRIM28Q13263 835 aaKnown RBP6.57□□□□□ -1.36
HERPUD1-207ENST00000563781 ZKSCAN2Q63HK3 967 aa6.57□□□□□ -1.36
HERPUD1-207ENST00000563781 MSL1Q68DK7 614 aa6.57□□□□□ -1.36
HERPUD1-207ENST00000563781 CYP2U1Q7Z449 544 aa6.57□□□□□ -1.36
HERPUD1-207ENST00000563781 ZNF34Q8IZ26 560 aa6.57□□□□□ -1.36
HERPUD1-207ENST00000563781 LINC00528Q8N1L1 170 aa6.57□□□□□ -1.36
HERPUD1-207ENST00000563781 SLC16A10Q8TF71 515 aa6.57□□□□□ -1.36
HERPUD1-207ENST00000563781 MYD88Q99836 296 aa6.57□□□□□ -1.36
HERPUD1-207ENST00000563781 SUPT16HQ9Y5B9 1047 aaKnown RBP6.57□□□□□ -1.36
HERPUD1-207ENST00000563781 PCDHGA11Q9Y5H2 935 aa6.57□□□□□ -1.36
HERPUD1-207ENST00000563781 IBTKQ9P2D0 1353 aaPredicted RBP6.57□□□□□ -1.36
HERPUD1-207ENST00000563781 POLRMTO00411 1230 aaKnown RBP6.56□□□□□ -1.36
HERPUD1-207ENST00000563781 UPP2O95045 317 aa6.56□□□□□ -1.36
HERPUD1-207ENST00000563781 ZBTB7AO95365 584 aa6.56□□□□□ -1.36
HERPUD1-207ENST00000563781 NTSR2O95665 410 aa6.56□□□□□ -1.36
HERPUD1-207ENST00000563781 CENPBP07199 599 aaPredicted RBP6.56□□□□□ -1.36
HERPUD1-207ENST00000563781 RFX1P22670 979 aa6.56□□□□□ -1.36
HERPUD1-207ENST00000563781 GPTP24298 496 aa6.56□□□□□ -1.36
HERPUD1-207ENST00000563781 NFIXQ14938 502 aa6.56□□□□□ -1.36
HERPUD1-207ENST00000563781 CWF19L2Q2TBE0 894 aaKnown RBP6.56□□□□□ -1.36
HERPUD1-207ENST00000563781 HSP90AB3PQ58FF7 597 aa6.56□□□□□ -1.36
HERPUD1-207ENST00000563781 SUSD4Q5VX71 490 aa6.56□□□□□ -1.36
HERPUD1-207ENST00000563781 INTS3Q68E01 1043 aaKnown RBP6.56□□□□□ -1.36
HERPUD1-207ENST00000563781 NLRP10Q86W26 655 aa6.56□□□□□ -1.36
HERPUD1-207ENST00000563781 DZIP1LQ8IYY4 767 aaKnown RBP6.56□□□□□ -1.36
HERPUD1-207ENST00000563781 TMEM57Q8N5G2 664 aa6.56□□□□□ -1.36
HERPUD1-207ENST00000563781 LINS1Q8NG48 757 aa6.56□□□□□ -1.36
HERPUD1-207ENST00000563781 PANK1Q8TE04 598 aa6.56□□□□□ -1.36
HERPUD1-207ENST00000563781 ZNF395Q9H8N7 513 aaPredicted RBP6.56□□□□□ -1.36
HERPUD1-207ENST00000563781 ZNF652Q9Y2D9 606 aa6.56□□□□□ -1.36
HERPUD1-207ENST00000563781 ARFGEF2Q9Y6D5 1785 aa6.55□□□□□ -1.36
HERPUD1-207ENST00000563781 ZBTB7BO15156 539 aaPredicted RBP6.55□□□□□ -1.36
HERPUD1-207ENST00000563781 SPINT1O43278 529 aa6.55□□□□□ -1.36
HERPUD1-207ENST00000563781 ALDH1L1O75891 902 aa6.55□□□□□ -1.36
HERPUD1-207ENST00000563781 GNRH1P01148 92 aa6.55□□□□□ -1.36
HERPUD1-207ENST00000563781 MMP10P09238 476 aa6.55□□□□□ -1.36
HERPUD1-207ENST00000563781 BMP2P12643 396 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms