RNA–Protein interactions for RNA: ENST00000563720.1

MAP1LC3B-204, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 3

Gene MAP1LC3B, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-204ENST00000563720 TIMM10P62072 90 aa21.58■■□□□ 1.05
MAP1LC3B-204ENST00000563720 TFCP2Q12800 502 aa21.58■■□□□ 1.05
MAP1LC3B-204ENST00000563720 APOBEC3HQ6NTF7 200 aaKnown RBP21.58■■□□□ 1.05
MAP1LC3B-204ENST00000563720 CDAN1Q8IWY9 1227 aa21.58■■□□□ 1.05
MAP1LC3B-204ENST00000563720 OPTNQ96CV9 577 aa21.58■■□□□ 1.05
MAP1LC3B-204ENST00000563720 ELP3Q9H9T3 547 aa21.58■■□□□ 1.05
MAP1LC3B-204ENST00000563720 HTTP42858 3142 aa21.58■■□□□ 1.05
MAP1LC3B-204ENST00000563720 AK9Q5TCS8 1911 aa21.58■■□□□ 1.04
MAP1LC3B-204ENST00000563720 SEMA3EO15041 775 aa21.57■■□□□ 1.04
MAP1LC3B-204ENST00000563720 RLBP1P12271 317 aa21.57■■□□□ 1.04
MAP1LC3B-204ENST00000563720 ARHGEF6Q15052 776 aa21.57■■□□□ 1.04
MAP1LC3B-204ENST00000563720 CCDC102BQ68D86 513 aa21.57■■□□□ 1.04
MAP1LC3B-204ENST00000563720 HHIPL2Q6UWX4 724 aa21.57■■□□□ 1.04
MAP1LC3B-204ENST00000563720 DENND2AQ9ULE3 1009 aa21.57■■□□□ 1.04
MAP1LC3B-204ENST00000563720 MKI67P46013 3256 aaKnown RBP21.57■■□□□ 1.04
MAP1LC3B-204ENST00000563720 SALL1Q9NSC2 1324 aa21.56■■□□□ 1.04
MAP1LC3B-204ENST00000563720 RBBP6Q7Z6E9 1792 aaKnown RBP21.56■■□□□ 1.04
MAP1LC3B-204ENST00000563720 A0A1B0GUL7 405 aa21.56■■□□□ 1.04
MAP1LC3B-204ENST00000563720 TNNI2P48788 182 aa21.56■■□□□ 1.04
MAP1LC3B-204ENST00000563720 CACNB3P54284 484 aa21.56■■□□□ 1.04
MAP1LC3B-204ENST00000563720 NBPF11Q86T75 865 aa21.56■■□□□ 1.04
MAP1LC3B-204ENST00000563720 FTSJ3Q8IY81 847 aaKnown RBP21.56■■□□□ 1.04
MAP1LC3B-204ENST00000563720 TMEM39BQ9GZU3 492 aa21.56■■□□□ 1.04
MAP1LC3B-204ENST00000563720 KIAA0100Q14667 2235 aaKnown RBP21.55■■□□□ 1.04
MAP1LC3B-204ENST00000563720 PRDX5P30044 214 aa21.55■■□□□ 1.04
MAP1LC3B-204ENST00000563720 FXR1P51114 621 aaKnown RBP eCLIP21.55■■□□□ 1.04
MAP1LC3B-204ENST00000563720 CAP1Q01518 475 aa21.55■■□□□ 1.04
MAP1LC3B-204ENST00000563720 SLC9C1Q4G0N8 1177 aa21.55■■□□□ 1.04
MAP1LC3B-204ENST00000563720 ZNF333Q96JL9 665 aa21.55■■□□□ 1.04
MAP1LC3B-204ENST00000563720 ZFYVE28Q9HCC9 887 aa21.55■■□□□ 1.04
MAP1LC3B-204ENST00000563720 AKAP2Q9Y2D5 859 aa21.55■■□□□ 1.04
MAP1LC3B-204ENST00000563720 POLA2Q14181 598 aa21.54■■□□□ 1.04
MAP1LC3B-204ENST00000563720 TAF1CQ15572 869 aaPredicted RBP21.54■■□□□ 1.04
MAP1LC3B-204ENST00000563720 SLC4A8Q2Y0W8 1093 aa21.54■■□□□ 1.04
MAP1LC3B-204ENST00000563720 XAGE2Q96GT9 111 aa21.54■■□□□ 1.04
MAP1LC3B-204ENST00000563720 MS4A4AQ96JQ5 239 aa21.54■■□□□ 1.04
MAP1LC3B-204ENST00000563720 ZBTB7BO15156 539 aaPredicted RBP21.53■■□□□ 1.04
MAP1LC3B-204ENST00000563720 RASGRF1Q13972 1273 aa21.53■■□□□ 1.04
MAP1LC3B-204ENST00000563720 DIXDC1Q155Q3 683 aa21.53■■□□□ 1.04
MAP1LC3B-204ENST00000563720 FKBP1CQ5VVH2 108 aa21.53■■□□□ 1.04
MAP1LC3B-204ENST00000563720 ITPRIPQ8IWB1 547 aa21.53■■□□□ 1.04
MAP1LC3B-204ENST00000563720 C1orf115Q9H7X2 142 aa21.53■■□□□ 1.04
MAP1LC3B-204ENST00000563720 DAGLAQ9Y4D2 1042 aa21.53■■□□□ 1.04
MAP1LC3B-204ENST00000563720 PTCH2Q9Y6C5 1203 aa21.53■■□□□ 1.04
MAP1LC3B-204ENST00000563720 PDS5AQ29RF7 1337 aaKnown RBP21.53■■□□□ 1.04
MAP1LC3B-204ENST00000563720 CCL15-CCL14A0A0B4J2E2 113 aa21.52■■□□□ 1.04
MAP1LC3B-204ENST00000563720 LDHBP07195 334 aaKnown RBP21.52■■□□□ 1.04
MAP1LC3B-204ENST00000563720 GTF2A2P52657 109 aa21.52■■□□□ 1.04
MAP1LC3B-204ENST00000563720 ATP8B2P98198 1209 aa21.52■■□□□ 1.04
MAP1LC3B-204ENST00000563720 G3BP1Q13283 466 aaKnown RBP eCLIP21.52■■□□□ 1.04
MAP1LC3B-204ENST00000563720 CCL15Q16663 113 aa21.52■■□□□ 1.04
MAP1LC3B-204ENST00000563720 FAM83AQ86UY5 434 aa21.52■■□□□ 1.04
MAP1LC3B-204ENST00000563720 SSH3Q8TE77 659 aa21.52■■□□□ 1.04
MAP1LC3B-204ENST00000563720 BRI3BPQ8WY22 251 aa21.52■■□□□ 1.04
MAP1LC3B-204ENST00000563720 TMOD2Q9NZR1 351 aa21.52■■□□□ 1.04
MAP1LC3B-204ENST00000563720 MVPQ14764 893 aaKnown RBP21.51■■□□□ 1.03
MAP1LC3B-204ENST00000563720 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.51■■□□□ 1.03
MAP1LC3B-204ENST00000563720 CNKSR2Q8WXI2 1034 aa21.51■■□□□ 1.03
MAP1LC3B-204ENST00000563720 NEUROD6Q96NK8 337 aa21.51■■□□□ 1.03
MAP1LC3B-204ENST00000563720 COLQQ9Y215 455 aaPredicted RBP21.51■■□□□ 1.03
MAP1LC3B-204ENST00000563720 DOCK2Q92608 1830 aa21.5■■□□□ 1.03
MAP1LC3B-204ENST00000563720 CENPFP49454 3210 aa21.5■■□□□ 1.03
MAP1LC3B-204ENST00000563720 MYO5AQ9Y4I1 1855 aaKnown RBP21.5■■□□□ 1.03
MAP1LC3B-204ENST00000563720 WDHD1O75717 1129 aaPredicted RBP21.5■■□□□ 1.03
MAP1LC3B-204ENST00000563720 MYCP01106 439 aaPredicted RBP21.5■■□□□ 1.03
MAP1LC3B-204ENST00000563720 MAP3K9P80192 1104 aa21.5■■□□□ 1.03
MAP1LC3B-204ENST00000563720 CSADQ9Y600 493 aa21.5■■□□□ 1.03
MAP1LC3B-204ENST00000563720 RPAP1Q9BWH6 1393 aaPredicted RBP21.49■■□□□ 1.03
MAP1LC3B-204ENST00000563720 VGLL4Q14135 290 aa21.49■■□□□ 1.03
MAP1LC3B-204ENST00000563720 CDC42EP5Q6NZY7 148 aa21.49■■□□□ 1.03
MAP1LC3B-204ENST00000563720 ZGPATQ8N5A5 531 aaKnown RBP21.49■■□□□ 1.03
MAP1LC3B-204ENST00000563720 PANK1Q8TE04 598 aa21.49■■□□□ 1.03
MAP1LC3B-204ENST00000563720 OTUD5Q96G74 571 aa21.49■■□□□ 1.03
MAP1LC3B-204ENST00000563720 KIF22Q14807 665 aa21.48■■□□□ 1.03
MAP1LC3B-204ENST00000563720 FAM43AQ8N2R8 423 aa21.48■■□□□ 1.03
MAP1LC3B-204ENST00000563720 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.48■■□□□ 1.03
MAP1LC3B-204ENST00000563720 ABCF2Q9UG63 623 aa21.47■■□□□ 1.03
MAP1LC3B-204ENST00000563720 GAKO14976 1311 aa21.47■■□□□ 1.03
MAP1LC3B-204ENST00000563720 ARID4AP29374 1257 aaPredicted RBP21.46■■□□□ 1.03
MAP1LC3B-204ENST00000563720 NFIAQ12857 509 aa21.46■■□□□ 1.03
MAP1LC3B-204ENST00000563720 SH3TC2Q8TF17 1288 aa21.46■■□□□ 1.03
MAP1LC3B-204ENST00000563720 FAM151AQ8WW52 585 aa21.46■■□□□ 1.03
MAP1LC3B-204ENST00000563720 USP40Q9NVE5 1235 aa21.46■■□□□ 1.03
MAP1LC3B-204ENST00000563720 HMG20BQ9P0W2 317 aa21.46■■□□□ 1.03
MAP1LC3B-204ENST00000563720 SURF6O75683 361 aaKnown RBP21.45■■□□□ 1.02
MAP1LC3B-204ENST00000563720 GORABQ5T7V8 394 aa21.45■■□□□ 1.02
MAP1LC3B-204ENST00000563720 PI16Q6UXB8 463 aa21.45■■□□□ 1.02
MAP1LC3B-204ENST00000563720 DZIP1Q86YF9 867 aaKnown RBP21.45■■□□□ 1.02
MAP1LC3B-204ENST00000563720 SPATA5Q8NB90 893 aa21.45■■□□□ 1.02
MAP1LC3B-204ENST00000563720 GPR108Q9NPR9 543 aa21.45■■□□□ 1.02
MAP1LC3B-204ENST00000563720 NOP58Q9Y2X3 529 aaKnown RBP21.45■■□□□ 1.02
MAP1LC3B-204ENST00000563720 MAST2Q6P0Q8 1798 aa21.45■■□□□ 1.02
MAP1LC3B-204ENST00000563720 H0YGN5 161 aa21.44■■□□□ 1.02
MAP1LC3B-204ENST00000563720 TLR2O60603 784 aa21.44■■□□□ 1.02
MAP1LC3B-204ENST00000563720 CETPP11597 493 aa21.44■■□□□ 1.02
MAP1LC3B-204ENST00000563720 TCP10Q12799 353 aa21.44■■□□□ 1.02
MAP1LC3B-204ENST00000563720 OS9Q13438 667 aaPredicted RBP21.44■■□□□ 1.02
MAP1LC3B-204ENST00000563720 TNNI3KQ59H18 835 aa21.44■■□□□ 1.02
MAP1LC3B-204ENST00000563720 SPTY2D1Q68D10 685 aaPredicted RBP21.44■■□□□ 1.02
MAP1LC3B-204ENST00000563720 CEP85Q6P2H3 762 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms