RNA–Protein interactions for RNA: ENST00000563297.5

CLK3-211, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-211ENST00000563297 FAM151AQ8WW52 585 aa19.59■□□□□ 0.73
CLK3-211ENST00000563297 AK9Q5TCS8 1911 aa19.59■□□□□ 0.73
CLK3-211ENST00000563297 LDHBP07195 334 aaKnown RBP19.58■□□□□ 0.72
CLK3-211ENST00000563297 DCAF15Q66K64 600 aa19.58■□□□□ 0.72
CLK3-211ENST00000563297 MIGA2Q7L4E1 593 aa19.58■□□□□ 0.72
CLK3-211ENST00000563297 ERO1BQ86YB8 467 aa19.58■□□□□ 0.72
CLK3-211ENST00000563297 FAM43AQ8N2R8 423 aa19.58■□□□□ 0.72
CLK3-211ENST00000563297 DENND2AQ9ULE3 1009 aa19.58■□□□□ 0.72
CLK3-211ENST00000563297 PTPN22Q9Y2R2 807 aa19.58■□□□□ 0.72
CLK3-211ENST00000563297 SALL1Q9NSC2 1324 aa19.57■□□□□ 0.72
CLK3-211ENST00000563297 IRF6O14896 467 aa19.57■□□□□ 0.72
CLK3-211ENST00000563297 SEMA3EO15041 775 aa19.57■□□□□ 0.72
CLK3-211ENST00000563297 ZBTB22O15209 634 aa19.57■□□□□ 0.72
CLK3-211ENST00000563297 ADORA1P30542 326 aa19.57■□□□□ 0.72
CLK3-211ENST00000563297 TIMM10P62072 90 aa19.57■□□□□ 0.72
CLK3-211ENST00000563297 TCP10Q12799 353 aa19.57■□□□□ 0.72
CLK3-211ENST00000563297 TAF1CQ15572 869 aaPredicted RBP19.57■□□□□ 0.72
CLK3-211ENST00000563297 CCDC102BQ68D86 513 aa19.57■□□□□ 0.72
CLK3-211ENST00000563297 EFCC1Q9HA90 598 aa19.57■□□□□ 0.72
CLK3-211ENST00000563297 ZFYVE28Q9HCC9 887 aa19.57■□□□□ 0.72
CLK3-211ENST00000563297 RPAP1Q9BWH6 1393 aaPredicted RBP19.57■□□□□ 0.72
CLK3-211ENST00000563297 GNAI3P08754 354 aa19.56■□□□□ 0.72
CLK3-211ENST00000563297 NFIAQ12857 509 aa19.56■□□□□ 0.72
CLK3-211ENST00000563297 ZNF341Q9BYN7 854 aa19.56■□□□□ 0.72
CLK3-211ENST00000563297 USP40Q9NVE5 1235 aa19.56■□□□□ 0.72
CLK3-211ENST00000563297 HTTP42858 3142 aa19.56■□□□□ 0.72
CLK3-211ENST00000563297 KIAA0100Q14667 2235 aaKnown RBP19.56■□□□□ 0.72
CLK3-211ENST00000563297 CETPP11597 493 aa19.55■□□□□ 0.72
CLK3-211ENST00000563297 INPP5BP32019 993 aa19.55■□□□□ 0.72
CLK3-211ENST00000563297 PPIL2Q13356 520 aa19.55■□□□□ 0.72
CLK3-211ENST00000563297 FAM198AQ9UFP1 575 aa19.55■□□□□ 0.72
CLK3-211ENST00000563297 ZNF112Q9UJU3 913 aa19.55■□□□□ 0.72
CLK3-211ENST00000563297 BTBD19C9JJ37 291 aa19.54■□□□□ 0.72
CLK3-211ENST00000563297 SRGAP3O43295 1099 aa19.54■□□□□ 0.72
CLK3-211ENST00000563297 SNAPC2Q13487 334 aa19.54■□□□□ 0.72
CLK3-211ENST00000563297 MTX1Q13505 466 aa19.54■□□□□ 0.72
CLK3-211ENST00000563297 ZFPM1Q8IX07 1006 aa19.54■□□□□ 0.72
CLK3-211ENST00000563297 MYH2Q9UKX2 1941 aa19.53■□□□□ 0.72
CLK3-211ENST00000563297 IPO8O15397 1037 aaKnown RBP19.53■□□□□ 0.72
CLK3-211ENST00000563297 SLC34A2O95436 690 aa19.53■□□□□ 0.72
CLK3-211ENST00000563297 PPATQ06203 517 aa19.53■□□□□ 0.72
CLK3-211ENST00000563297 TFCP2Q12800 502 aa19.53■□□□□ 0.72
CLK3-211ENST00000563297 RASGRF1Q13972 1273 aa19.53■□□□□ 0.72
CLK3-211ENST00000563297 TNNQ9UQP3 1299 aa19.53■□□□□ 0.72
CLK3-211ENST00000563297 CENPFP49454 3210 aa19.52■□□□□ 0.72
CLK3-211ENST00000563297 A0A1B0GUL7 405 aa19.52■□□□□ 0.72
CLK3-211ENST00000563297 TLR2O60603 784 aa19.52■□□□□ 0.72
CLK3-211ENST00000563297 BCAR3O75815 825 aa19.52■□□□□ 0.72
CLK3-211ENST00000563297 TRIM27P14373 513 aa19.52■□□□□ 0.72
CLK3-211ENST00000563297 ZGPATQ8N5A5 531 aaKnown RBP19.52■□□□□ 0.72
CLK3-211ENST00000563297 XAGE2Q96GT9 111 aa19.52■□□□□ 0.72
CLK3-211ENST00000563297 ZCCHC17Q9NP64 241 aaKnown RBP19.52■□□□□ 0.72
CLK3-211ENST00000563297 AKAP2Q9Y2D5 859 aa19.52■□□□□ 0.72
CLK3-211ENST00000563297 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.52■□□□□ 0.72
CLK3-211ENST00000563297 POTEFA5A3E0 1075 aa19.51■□□□□ 0.71
CLK3-211ENST00000563297 ARHGEF6Q15052 776 aa19.51■□□□□ 0.71
CLK3-211ENST00000563297 ARMC5Q96C12 935 aa19.51■□□□□ 0.71
CLK3-211ENST00000563297 FAM163AQ96GL9 167 aaPredicted RBP19.51■□□□□ 0.71
CLK3-211ENST00000563297 ABCF2Q9UG63 623 aa19.51■□□□□ 0.71
CLK3-211ENST00000563297 GAKO14976 1311 aa19.51■□□□□ 0.71
CLK3-211ENST00000563297 WDHD1O75717 1129 aaPredicted RBP19.5■□□□□ 0.71
CLK3-211ENST00000563297 ATF7IPQ6VMQ6 1270 aa19.5■□□□□ 0.71
CLK3-211ENST00000563297 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.5■□□□□ 0.71
CLK3-211ENST00000563297 FRAT1Q92837 279 aaPredicted RBP19.5■□□□□ 0.71
CLK3-211ENST00000563297 IDI2Q9BXS1 227 aa19.5■□□□□ 0.71
CLK3-211ENST00000563297 PDS5AQ29RF7 1337 aaKnown RBP19.5■□□□□ 0.71
CLK3-211ENST00000563297 ENTPD3O75355 529 aa19.49■□□□□ 0.71
CLK3-211ENST00000563297 GNAI2P04899 355 aa19.49■□□□□ 0.71
CLK3-211ENST00000563297 RGS3P49796 1198 aa19.49■□□□□ 0.71
CLK3-211ENST00000563297 NOL9Q5SY16 702 aaKnown RBP19.49■□□□□ 0.71
CLK3-211ENST00000563297 PRPF38BQ5VTL8 546 aaKnown RBP19.49■□□□□ 0.71
CLK3-211ENST00000563297 SPTY2D1Q68D10 685 aaPredicted RBP19.49■□□□□ 0.71
CLK3-211ENST00000563297 NEUROD6Q96NK8 337 aa19.49■□□□□ 0.71
CLK3-211ENST00000563297 KCNH4Q9UQ05 1017 aa19.49■□□□□ 0.71
CLK3-211ENST00000563297 MVPQ14764 893 aaKnown RBP19.48■□□□□ 0.71
CLK3-211ENST00000563297 SH3BP5LQ7L8J4 393 aa19.48■□□□□ 0.71
CLK3-211ENST00000563297 DZIP1Q86YF9 867 aaKnown RBP19.48■□□□□ 0.71
CLK3-211ENST00000563297 SLF2Q8IX21 1173 aa19.48■□□□□ 0.71
CLK3-211ENST00000563297 CLUAP1Q96AJ1 413 aa19.48■□□□□ 0.71
CLK3-211ENST00000563297 PTCH2Q9Y6C5 1203 aa19.48■□□□□ 0.71
CLK3-211ENST00000563297 PNMA6EA0A0J9YXQ4 647 aa19.47■□□□□ 0.71
CLK3-211ENST00000563297 PHF20L1A8MW92 1017 aa19.47■□□□□ 0.71
CLK3-211ENST00000563297 MAP3K10Q02779 954 aa19.47■□□□□ 0.71
CLK3-211ENST00000563297 MOGSQ13724 837 aa19.47■□□□□ 0.71
CLK3-211ENST00000563297 C17orf99Q6UX52 265 aa19.47■□□□□ 0.71
CLK3-211ENST00000563297 ANKRD23Q86SG2 305 aa19.47■□□□□ 0.71
CLK3-211ENST00000563297 ARHGAP39Q9C0H5 1083 aa19.47■□□□□ 0.71
CLK3-211ENST00000563297 ATRNL1Q5VV63 1379 aa19.46■□□□□ 0.71
CLK3-211ENST00000563297 BTDP43251 543 aa19.46■□□□□ 0.71
CLK3-211ENST00000563297 LACTBP83111 547 aaPredicted RBP19.46■□□□□ 0.71
CLK3-211ENST00000563297 MECOMQ03112 1051 aa19.46■□□□□ 0.71
CLK3-211ENST00000563297 ERICH6Q7L0X2 663 aa19.46■□□□□ 0.71
CLK3-211ENST00000563297 ZNF384Q8TF68 577 aa19.46■□□□□ 0.71
CLK3-211ENST00000563297 DDX4Q9NQI0 724 aaKnown RBP19.46■□□□□ 0.71
CLK3-211ENST00000563297 HMG20BQ9P0W2 317 aa19.46■□□□□ 0.71
CLK3-211ENST00000563297 MKI67P46013 3256 aaKnown RBP19.46■□□□□ 0.71
CLK3-211ENST00000563297 GPR75-ASB3A0A0A6YYF3 556 aa19.45■□□□□ 0.7
CLK3-211ENST00000563297 DDTLA6NHG4 134 aaPredicted RBP19.45■□□□□ 0.7
CLK3-211ENST00000563297 PDHXO00330 501 aa19.45■□□□□ 0.7
CLK3-211ENST00000563297 EN2P19622 333 aaPredicted RBP19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms