RNA–Protein interactions for RNA: ENST00000562540.1

DENND4A-205, Transcript of DENN domain containing 4A, humanhuman

TSL 2

Gene DENND4A, Length 629 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-205ENST00000562540 TRIM56Q9BRZ2 755 aaKnown RBP6.57□□□□□ -1.36
DENND4A-205ENST00000562540 ANO2Q9NQ90 1003 aa6.57□□□□□ -1.36
DENND4A-205ENST00000562540 SLC5A6Q9Y289 635 aa6.57□□□□□ -1.36
DENND4A-205ENST00000562540 ECEL1O95672 775 aa6.56□□□□□ -1.36
DENND4A-205ENST00000562540 B3GALT4O96024 378 aa6.56□□□□□ -1.36
DENND4A-205ENST00000562540 PDE3AQ14432 1141 aa6.56□□□□□ -1.36
DENND4A-205ENST00000562540 KSR1Q8IVT5 923 aa6.56□□□□□ -1.36
DENND4A-205ENST00000562540 STK11IPQ8N1F8 1099 aa6.56□□□□□ -1.36
DENND4A-205ENST00000562540 FAM168AQ92567 244 aa6.56□□□□□ -1.36
DENND4A-205ENST00000562540 DYNC1LI2O43237 492 aaPredicted RBP6.55□□□□□ -1.36
DENND4A-205ENST00000562540 CILP2Q8IUL8 1156 aa6.55□□□□□ -1.36
DENND4A-205ENST00000562540 GSX1Q9H4S2 264 aaPredicted RBP6.55□□□□□ -1.36
DENND4A-205ENST00000562540 LGR6Q9HBX8 967 aa6.55□□□□□ -1.36
DENND4A-205ENST00000562540 C1GALT1Q9NS00 363 aa6.55□□□□□ -1.36
DENND4A-205ENST00000562540 ARID3CA6NKF2 412 aa6.54□□□□□ -1.36
DENND4A-205ENST00000562540 AOC2O75106 756 aa6.54□□□□□ -1.36
DENND4A-205ENST00000562540 KRTAP19-4Q3LI73 84 aa6.54□□□□□ -1.36
DENND4A-205ENST00000562540 OGFOD3Q6PK18 319 aa6.54□□□□□ -1.36
DENND4A-205ENST00000562540 SEZ6L2Q6UXD5 910 aa6.54□□□□□ -1.36
DENND4A-205ENST00000562540 GLIS3Q8NEA6 775 aa6.54□□□□□ -1.36
DENND4A-205ENST00000562540 WDR18Q9BV38 432 aa6.54□□□□□ -1.36
DENND4A-205ENST00000562540 KRTAP9-3Q9BYQ3 159 aa6.54□□□□□ -1.36
DENND4A-205ENST00000562540 ZNF576Q9H609 170 aa6.54□□□□□ -1.36
DENND4A-205ENST00000562540 NCANO14594 1321 aa6.53□□□□□ -1.36
DENND4A-205ENST00000562540 CYP27C1Q4G0S4 372 aa6.53□□□□□ -1.36
DENND4A-205ENST00000562540 USPL1Q5W0Q7 1092 aa6.53□□□□□ -1.36
DENND4A-205ENST00000562540 ATG4DQ86TL0 474 aaPredicted RBP6.53□□□□□ -1.36
DENND4A-205ENST00000562540 EHD4Q9H223 541 aa6.53□□□□□ -1.36
DENND4A-205ENST00000562540 PPP1R15AO75807 674 aaPredicted RBP6.52□□□□□ -1.37
DENND4A-205ENST00000562540 NEFLP07196 543 aa6.52□□□□□ -1.37
DENND4A-205ENST00000562540 ITPKAP23677 461 aa6.52□□□□□ -1.37
DENND4A-205ENST00000562540 MESP2Q0VG99 397 aa6.52□□□□□ -1.37
DENND4A-205ENST00000562540 AP3B2Q13367 1082 aa6.52□□□□□ -1.37
DENND4A-205ENST00000562540 KIAA0319Q5VV43 1072 aa6.52□□□□□ -1.37
DENND4A-205ENST00000562540 PHLDB3Q6NSJ2 640 aa6.52□□□□□ -1.37
DENND4A-205ENST00000562540 MISP3Q96FF7 219 aa6.52□□□□□ -1.37
DENND4A-205ENST00000562540 SLC38A3Q99624 504 aa6.52□□□□□ -1.37
DENND4A-205ENST00000562540 PIDD1Q9HB75 910 aa6.52□□□□□ -1.37
DENND4A-205ENST00000562540 BRPF3Q9ULD4 1205 aa6.52□□□□□ -1.37
DENND4A-205ENST00000562540 PPP1R9AQ9ULJ8 1098 aa6.52□□□□□ -1.37
DENND4A-205ENST00000562540 PRRG2O14669 202 aa6.51□□□□□ -1.37
DENND4A-205ENST00000562540 BNIP3Q12983 259 aa6.51□□□□□ -1.37
DENND4A-205ENST00000562540 LILRA6Q6PI73 481 aa6.51□□□□□ -1.37
DENND4A-205ENST00000562540 TMEM40Q8WWA1 233 aa6.51□□□□□ -1.37
DENND4A-205ENST00000562540 RC3H2Q9HBD1 1191 aaKnown RBP6.51□□□□□ -1.37
DENND4A-205ENST00000562540 ADAMTS6Q9UKP5 1117 aa6.51□□□□□ -1.37
DENND4A-205ENST00000562540 SYNGAP1Q96PV0 1343 aa6.5□□□□□ -1.37
DENND4A-205ENST00000562540 TMPRSS2O15393 492 aa6.5□□□□□ -1.37
DENND4A-205ENST00000562540 RNASE1P07998 156 aaKnown RBP6.5□□□□□ -1.37
DENND4A-205ENST00000562540 FAM87AP0C7U9 286 aa6.5□□□□□ -1.37
DENND4A-205ENST00000562540 CDK5R2Q13319 367 aa6.5□□□□□ -1.37
DENND4A-205ENST00000562540 PLD6Q8N2A8 252 aaKnown RBP6.5□□□□□ -1.37
DENND4A-205ENST00000562540 FAM181AQ8N9Y4 354 aa6.5□□□□□ -1.37
DENND4A-205ENST00000562540 NPHS2Q9NP85 383 aa6.5□□□□□ -1.37
DENND4A-205ENST00000562540 MBNL3Q9NUK0 354 aaKnown RBP6.5□□□□□ -1.37
DENND4A-205ENST00000562540 CARNS1A5YM72 827 aa6.49□□□□□ -1.37
DENND4A-205ENST00000562540 CPNE3O75131 537 aaKnown RBP6.49□□□□□ -1.37
DENND4A-205ENST00000562540 LIG1P18858 919 aa6.49□□□□□ -1.37
DENND4A-205ENST00000562540 KRTAP5-3Q6L8H2 238 aa6.49□□□□□ -1.37
DENND4A-205ENST00000562540 LCNL1Q6ZST4 164 aa6.49□□□□□ -1.37
DENND4A-205ENST00000562540 C1QL4Q86Z23 238 aa6.49□□□□□ -1.37
DENND4A-205ENST00000562540 CCDC82Q8N4S0 544 aa6.49□□□□□ -1.37
DENND4A-205ENST00000562540 NETO1Q8TDF5 533 aa6.49□□□□□ -1.37
DENND4A-205ENST00000562540 ATXN3LQ9H3M9 355 aa6.49□□□□□ -1.37
DENND4A-205ENST00000562540 EGFL7Q9UHF1 273 aa6.49□□□□□ -1.37
DENND4A-205ENST00000562540 B8ZZF3 427 aa6.48□□□□□ -1.37
DENND4A-205ENST00000562540 H3BRB1 525 aa6.48□□□□□ -1.37
DENND4A-205ENST00000562540 NDUFB5O43674 189 aa6.48□□□□□ -1.37
DENND4A-205ENST00000562540 ICMTO60725 284 aa6.48□□□□□ -1.37
DENND4A-205ENST00000562540 FUT4P22083 530 aa6.48□□□□□ -1.37
DENND4A-205ENST00000562540 CFPP27918 469 aa6.48□□□□□ -1.37
DENND4A-205ENST00000562540 BUD31P41223 144 aaPredicted RBP6.48□□□□□ -1.37
DENND4A-205ENST00000562540 HNRNPUQ00839 825 aaKnown RBP eCLIP6.48□□□□□ -1.37
DENND4A-205ENST00000562540 ID3Q02535 119 aa6.48□□□□□ -1.37
DENND4A-205ENST00000562540 PTPN12Q05209 780 aaKnown RBP6.48□□□□□ -1.37
DENND4A-205ENST00000562540 ORC1Q13415 861 aa6.48□□□□□ -1.37
DENND4A-205ENST00000562540 GLYCTKQ8IVS8 523 aa6.48□□□□□ -1.37
DENND4A-205ENST00000562540 ZC3H12CQ9C0D7 883 aaKnown RBP6.48□□□□□ -1.37
DENND4A-205ENST00000562540 TUT1Q9H6E5 874 aaKnown RBP6.48□□□□□ -1.37
DENND4A-205ENST00000562540 CCDC86Q9H6F5 360 aaKnown RBP6.48□□□□□ -1.37
DENND4A-205ENST00000562540 ABCB6Q9NP58 842 aa6.48□□□□□ -1.37
DENND4A-205ENST00000562540 CRIM1Q9NZV1 1036 aa6.48□□□□□ -1.37
DENND4A-205ENST00000562540 SLFN14P0C7P3 912 aa6.47□□□□□ -1.37
DENND4A-205ENST00000562540 CD8BP10966 210 aa6.47□□□□□ -1.37
DENND4A-205ENST00000562540 RPS26P11Q5JNZ5 115 aaPredicted RBP6.47□□□□□ -1.37
DENND4A-205ENST00000562540 PRPF40BQ6NWY9 871 aaKnown RBP6.47□□□□□ -1.37
DENND4A-205ENST00000562540 ARHGAP27Q6ZUM4 889 aa6.47□□□□□ -1.37
DENND4A-205ENST00000562540 LRRN4CLQ8ND94 238 aa6.47□□□□□ -1.37
DENND4A-205ENST00000562540 WDR89Q96FK6 387 aaPredicted RBP6.47□□□□□ -1.37
DENND4A-205ENST00000562540 FAM84AQ96KN4 292 aa6.47□□□□□ -1.37
DENND4A-205ENST00000562540 FANCD2OSQ96PS1 177 aa6.47□□□□□ -1.37
DENND4A-205ENST00000562540 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.47□□□□□ -1.37
DENND4A-205ENST00000562540 GADD45BO75293 160 aaPredicted RBP6.46□□□□□ -1.38
DENND4A-205ENST00000562540 CD96P40200 585 aa6.46□□□□□ -1.38
DENND4A-205ENST00000562540 ZNF157P51786 506 aaPredicted RBP6.46□□□□□ -1.38
DENND4A-205ENST00000562540 PDE3BQ13370 1112 aa6.46□□□□□ -1.38
DENND4A-205ENST00000562540 SMYD4Q8IYR2 804 aaPredicted RBP6.46□□□□□ -1.38
DENND4A-205ENST00000562540 BHLHE22Q8NFJ8 381 aaPredicted RBP6.46□□□□□ -1.38
DENND4A-205ENST00000562540 VAV3Q9UKW4 847 aa6.46□□□□□ -1.38
DENND4A-205ENST00000562540 TMEM238LA0A1B0GVL6 79 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms