RNA–Protein interactions for RNA: ENST00000562173.1

UBR1-203, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-203ENST00000562173 DHX32Q7L7V1 743 aaKnown RBP8.36□□□□□ -1.07
UBR1-203ENST00000562173 RAB44Q7Z6P3 723 aaPredicted RBP8.36□□□□□ -1.07
UBR1-203ENST00000562173 OR13H1Q8NG92 308 aa8.36□□□□□ -1.07
UBR1-203ENST00000562173 TRPM4Q8TD43 1214 aa8.36□□□□□ -1.07
UBR1-203ENST00000562173 GGNBP2Q9H3C7 697 aa8.36□□□□□ -1.07
UBR1-203ENST00000562173 ZFATQ9P243 1243 aa8.36□□□□□ -1.07
UBR1-203ENST00000562173 SLIT2O94813 1529 aa8.35□□□□□ -1.07
UBR1-203ENST00000562173 ELOA3CA0A087WX78 387 aaPredicted RBP8.35□□□□□ -1.07
UBR1-203ENST00000562173 ELOA3DA6NLF2 546 aaPredicted RBP8.35□□□□□ -1.07
UBR1-203ENST00000562173 NEURL1BA8MQ27 555 aa8.35□□□□□ -1.07
UBR1-203ENST00000562173 GPR182O15218 404 aa8.35□□□□□ -1.07
UBR1-203ENST00000562173 TREHO43280 583 aa8.35□□□□□ -1.07
UBR1-203ENST00000562173 ITGAEP38570 1179 aa8.35□□□□□ -1.07
UBR1-203ENST00000562173 ELOA3BQ3SY89 546 aa8.35□□□□□ -1.07
UBR1-203ENST00000562173 TTC39BQ5VTQ0 682 aaPredicted RBP8.35□□□□□ -1.07
UBR1-203ENST00000562173 KANK3Q6NY19 840 aa8.35□□□□□ -1.07
UBR1-203ENST00000562173 TMC7Q7Z402 723 aa8.35□□□□□ -1.07
UBR1-203ENST00000562173 FCHSD1Q86WN1 690 aa8.35□□□□□ -1.07
UBR1-203ENST00000562173 ELOA3Q8NG57 546 aa8.35□□□□□ -1.07
UBR1-203ENST00000562173 NEDD1Q8NHV4 660 aa8.35□□□□□ -1.07
UBR1-203ENST00000562173 PMEPA1Q969W9 287 aa8.35□□□□□ -1.07
UBR1-203ENST00000562173 KLF15Q9UIH9 416 aa8.35□□□□□ -1.07
UBR1-203ENST00000562173 PIK3R4Q99570 1358 aa8.35□□□□□ -1.07
UBR1-203ENST00000562173 FMN2Q9NZ56 1722 aa8.34□□□□□ -1.07
UBR1-203ENST00000562173 IFT172Q9UG01 1749 aa8.34□□□□□ -1.07
UBR1-203ENST00000562173 MMP20O60882 483 aa8.34□□□□□ -1.07
UBR1-203ENST00000562173 TNFRSF21O75509 655 aa8.34□□□□□ -1.07
UBR1-203ENST00000562173 TARSP26639 723 aaKnown RBP8.34□□□□□ -1.07
UBR1-203ENST00000562173 ADH7P40394 386 aa8.34□□□□□ -1.07
UBR1-203ENST00000562173 R3HDM1Q15032 1099 aaKnown RBP8.34□□□□□ -1.07
UBR1-203ENST00000562173 ZNF326Q5BKZ1 582 aaKnown RBP8.34□□□□□ -1.07
UBR1-203ENST00000562173 KRT25Q7Z3Z0 450 aa8.34□□□□□ -1.07
UBR1-203ENST00000562173 UBE2OQ9C0C9 1292 aaKnown RBP8.34□□□□□ -1.07
UBR1-203ENST00000562173 DNAJC25Q9H1X3 360 aa8.34□□□□□ -1.07
UBR1-203ENST00000562173 BLMP54132 1417 aaPredicted RBP8.34□□□□□ -1.07
UBR1-203ENST00000562173 PTCH1Q13635 1447 aa8.34□□□□□ -1.07
UBR1-203ENST00000562173 NUP188Q5SRE5 1749 aa8.34□□□□□ -1.07
UBR1-203ENST00000562173 PHF20L1A8MW92 1017 aa8.33□□□□□ -1.08
UBR1-203ENST00000562173 PHACTR2O75167 634 aa8.33□□□□□ -1.08
UBR1-203ENST00000562173 FMR1Q06787 632 aaKnown RBP eCLIP8.33□□□□□ -1.08
UBR1-203ENST00000562173 WAPLQ7Z5K2 1190 aa8.33□□□□□ -1.08
UBR1-203ENST00000562173 TMC1Q8TDI8 760 aa8.33□□□□□ -1.08
UBR1-203ENST00000562173 TMEM63CQ9P1W3 806 aa8.33□□□□□ -1.08
UBR1-203ENST00000562173 SLC6A14Q9UN76 642 aa8.33□□□□□ -1.08
UBR1-203ENST00000562173 KIF4AO95239 1232 aa8.32□□□□□ -1.08
UBR1-203ENST00000562173 SNRPNP63162 240 aaKnown RBP8.32□□□□□ -1.08
UBR1-203ENST00000562173 DNAJC14Q6Y2X3 702 aaPredicted RBP8.32□□□□□ -1.08
UBR1-203ENST00000562173 GALNT6Q8NCL4 622 aa8.32□□□□□ -1.08
UBR1-203ENST00000562173 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.32□□□□□ -1.08
UBR1-203ENST00000562173 DNAJB12Q9NXW2 375 aaKnown RBP8.32□□□□□ -1.08
UBR1-203ENST00000562173 RGPD1P0DJD0 1748 aa8.32□□□□□ -1.08
UBR1-203ENST00000562173 CRYBG1Q9Y4K1 1723 aa8.32□□□□□ -1.08
UBR1-203ENST00000562173 ALAS2P22557 587 aa8.31□□□□□ -1.08
UBR1-203ENST00000562173 HYAL2Q12891 473 aa8.31□□□□□ -1.08
UBR1-203ENST00000562173 DSC3Q14574 896 aa8.31□□□□□ -1.08
UBR1-203ENST00000562173 EZH2Q15910 746 aaKnown RBP8.31□□□□□ -1.08
UBR1-203ENST00000562173 EDARADDQ8WWZ3 215 aa8.31□□□□□ -1.08
UBR1-203ENST00000562173 NUP155O75694 1391 aa8.31□□□□□ -1.08
UBR1-203ENST00000562173 RREB1Q92766 1687 aa8.3□□□□□ -1.08
UBR1-203ENST00000562173 NWD2Q9ULI1 1742 aa8.3□□□□□ -1.08
UBR1-203ENST00000562173 A6NHS1 94 aa8.3□□□□□ -1.08
UBR1-203ENST00000562173 HOXB4P17483 251 aaPredicted RBP8.3□□□□□ -1.08
UBR1-203ENST00000562173 FGD1P98174 961 aa8.3□□□□□ -1.08
UBR1-203ENST00000562173 BEND7Q8N7W2 519 aaPredicted RBP8.3□□□□□ -1.08
UBR1-203ENST00000562173 CHRDQ9H2X0 955 aa8.3□□□□□ -1.08
UBR1-203ENST00000562173 FRRS1LQ9P0K9 344 aa8.3□□□□□ -1.08
UBR1-203ENST00000562173 CDC42BPGQ6DT37 1551 aa8.3□□□□□ -1.08
UBR1-203ENST00000562173 NAIPQ13075 1403 aa8.29□□□□□ -1.08
UBR1-203ENST00000562173 CPNE3O75131 537 aaKnown RBP8.29□□□□□ -1.08
UBR1-203ENST00000562173 EDN3P14138 238 aa8.29□□□□□ -1.08
UBR1-203ENST00000562173 CES1P23141 567 aa8.29□□□□□ -1.08
UBR1-203ENST00000562173 PODNQ7Z5L7 613 aa8.29□□□□□ -1.08
UBR1-203ENST00000562173 UNC5CLQ8IV45 518 aa8.29□□□□□ -1.08
UBR1-203ENST00000562173 FBF1Q8TES7 1133 aa8.29□□□□□ -1.08
UBR1-203ENST00000562173 RBSNQ9H1K0 784 aa8.29□□□□□ -1.08
UBR1-203ENST00000562173 STK26Q9P289 416 aa8.29□□□□□ -1.08
UBR1-203ENST00000562173 FOXD3Q9UJU5 478 aaPredicted RBP8.29□□□□□ -1.08
UBR1-203ENST00000562173 TRPM3Q9HCF6 1732 aaPredicted RBP8.29□□□□□ -1.08
UBR1-203ENST00000562173 THSD7AQ9UPZ6 1657 aa8.28□□□□□ -1.08
UBR1-203ENST00000562173 MFAP1P55081 439 aaKnown RBP8.28□□□□□ -1.08
UBR1-203ENST00000562173 TMEM132EQ6IEE7 984 aa8.28□□□□□ -1.08
UBR1-203ENST00000562173 NPAS4Q8IUM7 802 aa8.28□□□□□ -1.08
UBR1-203ENST00000562173 DCAF5Q96JK2 942 aa8.28□□□□□ -1.08
UBR1-203ENST00000562173 PDGFDQ9GZP0 370 aaPredicted RBP8.28□□□□□ -1.08
UBR1-203ENST00000562173 PRDM6Q9NQX0 595 aa8.28□□□□□ -1.08
UBR1-203ENST00000562173 CCDC9Q9Y3X0 531 aaKnown RBP8.28□□□□□ -1.08
UBR1-203ENST00000562173 ANKRD33BA6NCL7 494 aa8.27□□□□□ -1.09
UBR1-203ENST00000562173 EIF1AYO14602 144 aaKnown RBP8.27□□□□□ -1.09
UBR1-203ENST00000562173 ITGB2P05107 769 aa8.27□□□□□ -1.09
UBR1-203ENST00000562173 TBC1D8BQ0IIM8 1120 aa8.27□□□□□ -1.09
UBR1-203ENST00000562173 ENOX2Q16206 610 aaKnown RBP8.27□□□□□ -1.09
UBR1-203ENST00000562173 CHSY3Q70JA7 882 aa8.27□□□□□ -1.09
UBR1-203ENST00000562173 FAM35AQ86V20 835 aa8.27□□□□□ -1.09
UBR1-203ENST00000562173 C1orf127Q8N9H9 656 aa8.27□□□□□ -1.09
UBR1-203ENST00000562173 TTC9Q92623 222 aa8.27□□□□□ -1.09
UBR1-203ENST00000562173 SPACA7Q96KW9 195 aa8.27□□□□□ -1.09
UBR1-203ENST00000562173 CSRNP1Q96S65 589 aa8.27□□□□□ -1.09
UBR1-203ENST00000562173 ZFYVE28Q9HCC9 887 aa8.27□□□□□ -1.09
UBR1-203ENST00000562173 CNTN3Q9P232 1028 aa8.27□□□□□ -1.09
UBR1-203ENST00000562173 NAGPAQ9UK23 515 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms