RNA–Protein interactions for RNA: ENST00000561751.1

CDH1-203, Transcript of cadherin 1, humanhuman

TSL 4

Gene CDH1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-203ENST00000561751 EVCP57679 992 aa8.37□□□□□ -1.07
CDH1-203ENST00000561751 FOXC1Q12948 553 aa8.37□□□□□ -1.07
CDH1-203ENST00000561751 GRIK3Q13003 919 aa8.37□□□□□ -1.07
CDH1-203ENST00000561751 TRAF1Q13077 416 aa8.37□□□□□ -1.07
CDH1-203ENST00000561751 STX1AQ16623 288 aa8.37□□□□□ -1.07
CDH1-203ENST00000561751 LONRF2Q1L5Z9 754 aa8.37□□□□□ -1.07
CDH1-203ENST00000561751 PREPLQ4J6C6 727 aaPredicted RBP8.37□□□□□ -1.07
CDH1-203ENST00000561751 HSP90B2PQ58FF3 399 aa8.37□□□□□ -1.07
CDH1-203ENST00000561751 LRRC31Q6UY01 552 aa8.37□□□□□ -1.07
CDH1-203ENST00000561751 YTHDF3Q7Z739 585 aaKnown RBP8.37□□□□□ -1.07
CDH1-203ENST00000561751 MSANTD4Q8NCY6 345 aa8.37□□□□□ -1.07
CDH1-203ENST00000561751 GOLGA1Q92805 767 aa8.37□□□□□ -1.07
CDH1-203ENST00000561751 CABS1Q96KC9 395 aa8.37□□□□□ -1.07
CDH1-203ENST00000561751 TTC14Q96N46 770 aa8.37□□□□□ -1.07
CDH1-203ENST00000561751 PAGR1Q9BTK6 254 aa8.37□□□□□ -1.07
CDH1-203ENST00000561751 HOMER3Q9NSC5 361 aa8.37□□□□□ -1.07
CDH1-203ENST00000561751 STAP2Q9UGK3 403 aa8.37□□□□□ -1.07
CDH1-203ENST00000561751 MCM8Q9UJA3 840 aa8.37□□□□□ -1.07
CDH1-203ENST00000561751 MTMR6Q9Y217 621 aa8.37□□□□□ -1.07
CDH1-203ENST00000561751 NRXN1Q9ULB1 1477 aa8.37□□□□□ -1.07
CDH1-203ENST00000561751 NWD1Q149M9 1564 aa8.36□□□□□ -1.07
CDH1-203ENST00000561751 A0A1B0GUA9 196 aa8.36□□□□□ -1.07
CDH1-203ENST00000561751 SRRM3A6NNA2 597 aaPredicted RBP8.36□□□□□ -1.07
CDH1-203ENST00000561751 USP27XA6NNY8 438 aa8.36□□□□□ -1.07
CDH1-203ENST00000561751 VAMP4O75379 141 aa8.36□□□□□ -1.07
CDH1-203ENST00000561751 FSBPO95073 299 aa8.36□□□□□ -1.07
CDH1-203ENST00000561751 NBPF7P0C2Y1 421 aaPredicted RBP8.36□□□□□ -1.07
CDH1-203ENST00000561751 GPTP24298 496 aa8.36□□□□□ -1.07
CDH1-203ENST00000561751 RDXP35241 583 aaKnown RBP8.36□□□□□ -1.07
CDH1-203ENST00000561751 RWDD2BP57060 319 aa8.36□□□□□ -1.07
CDH1-203ENST00000561751 DRP2Q13474 957 aa8.36□□□□□ -1.07
CDH1-203ENST00000561751 KIF4BQ2VIQ3 1234 aa8.36□□□□□ -1.07
CDH1-203ENST00000561751 VPS53Q5VIR6 699 aa8.36□□□□□ -1.07
CDH1-203ENST00000561751 TRIM65Q6PJ69 517 aa8.36□□□□□ -1.07
CDH1-203ENST00000561751 B4GALNT4Q76KP1 1039 aa8.36□□□□□ -1.07
CDH1-203ENST00000561751 C14orf37Q86TY3 774 aa8.36□□□□□ -1.07
CDH1-203ENST00000561751 CEP112Q8N8E3 955 aa8.36□□□□□ -1.07
CDH1-203ENST00000561751 ARMC2Q8NEN0 867 aa8.36□□□□□ -1.07
CDH1-203ENST00000561751 FAXDC2Q96IV6 333 aa8.36□□□□□ -1.07
CDH1-203ENST00000561751 PRAM1Q96QH2 718 aa8.36□□□□□ -1.07
CDH1-203ENST00000561751 ZCCHC17Q9NP64 241 aaKnown RBP8.36□□□□□ -1.07
CDH1-203ENST00000561751 ANO10Q9NW15 660 aa8.36□□□□□ -1.07
CDH1-203ENST00000561751 L1RE1Q9UN81 338 aa8.36□□□□□ -1.07
CDH1-203ENST00000561751 TET3O43151 1660 aa8.36□□□□□ -1.07
CDH1-203ENST00000561751 KDRP35968 1356 aa8.35□□□□□ -1.07
CDH1-203ENST00000561751 KIAA0232Q92628 1395 aa8.35□□□□□ -1.07
CDH1-203ENST00000561751 JCADQ9P266 1359 aa8.35□□□□□ -1.07
CDH1-203ENST00000561751 CDC42BPGQ6DT37 1551 aa8.35□□□□□ -1.07
CDH1-203ENST00000561751 GOLGA6L4A6NEF3 574 aa8.35□□□□□ -1.07
CDH1-203ENST00000561751 EBAG9O00559 213 aa8.35□□□□□ -1.07
CDH1-203ENST00000561751 SFPQP23246 707 aaKnown RBP eCLIP8.35□□□□□ -1.07
CDH1-203ENST00000561751 PRPHP41219 470 aa8.35□□□□□ -1.07
CDH1-203ENST00000561751 ARHGAP25P42331 645 aa8.35□□□□□ -1.07
CDH1-203ENST00000561751 MTHFSP49914 203 aa8.35□□□□□ -1.07
CDH1-203ENST00000561751 SLMAPQ14BN4 828 aa8.35□□□□□ -1.07
CDH1-203ENST00000561751 NEUROD2Q15784 382 aa8.35□□□□□ -1.07
CDH1-203ENST00000561751 RGL3Q3MIN7 710 aa8.35□□□□□ -1.07
CDH1-203ENST00000561751 MSS51Q4VC12 460 aa8.35□□□□□ -1.07
CDH1-203ENST00000561751 BEND6Q5SZJ8 279 aaPredicted RBP8.35□□□□□ -1.07
CDH1-203ENST00000561751 NUTM2DQ5VT03 806 aaPredicted RBP8.35□□□□□ -1.07
CDH1-203ENST00000561751 RCSD1Q6JBY9 416 aa8.35□□□□□ -1.07
CDH1-203ENST00000561751 KCNB2Q92953 911 aa8.35□□□□□ -1.07
CDH1-203ENST00000561751 HLA-CQ95604 372 aa8.35□□□□□ -1.07
CDH1-203ENST00000561751 ZNF775Q96BV0 537 aaPredicted RBP8.35□□□□□ -1.07
CDH1-203ENST00000561751 XAGE2Q96GT9 111 aa8.35□□□□□ -1.07
CDH1-203ENST00000561751 PARD6BQ9BYG5 372 aa8.35□□□□□ -1.07
CDH1-203ENST00000561751 GDPD2Q9HCC8 539 aa8.35□□□□□ -1.07
CDH1-203ENST00000561751 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.35□□□□□ -1.07
CDH1-203ENST00000561751 RRP7AQ9Y3A4 280 aaKnown RBP8.35□□□□□ -1.07
CDH1-203ENST00000561751 PARP3Q9Y6F1 533 aa8.35□□□□□ -1.07
CDH1-203ENST00000561751 PIK3C2BO00750 1634 aa8.35□□□□□ -1.07
CDH1-203ENST00000561751 LRP6O75581 1613 aa8.35□□□□□ -1.07
CDH1-203ENST00000561751 COL16A1Q07092 1604 aaPredicted RBP8.35□□□□□ -1.07
CDH1-203ENST00000561751 SETBP1Q9Y6X0 1596 aa8.35□□□□□ -1.07
CDH1-203ENST00000561751 SALL3Q9BXA9 1300 aa8.34□□□□□ -1.07
CDH1-203ENST00000561751 BECN2A8MW95 431 aa8.34□□□□□ -1.07
CDH1-203ENST00000561751 ST8SIA5O15466 376 aa8.34□□□□□ -1.07
CDH1-203ENST00000561751 SASH1O94885 1247 aa8.34□□□□□ -1.07
CDH1-203ENST00000561751 CHMLP26374 656 aa8.34□□□□□ -1.07
CDH1-203ENST00000561751 NF2P35240 595 aa8.34□□□□□ -1.07
CDH1-203ENST00000561751 PDE1AP54750 535 aa8.34□□□□□ -1.07
CDH1-203ENST00000561751 GNAI1P63096 354 aa8.34□□□□□ -1.07
CDH1-203ENST00000561751 MDM2Q00987 491 aaPredicted RBP8.34□□□□□ -1.07
CDH1-203ENST00000561751 LMNB2Q03252 620 aa8.34□□□□□ -1.07
CDH1-203ENST00000561751 PDCD2Q16342 344 aaPredicted RBP8.34□□□□□ -1.07
CDH1-203ENST00000561751 ISM2Q6H9L7 571 aa8.34□□□□□ -1.07
CDH1-203ENST00000561751 EP400NLQ6ZTU2 488 aa8.34□□□□□ -1.07
CDH1-203ENST00000561751 KIAA1328Q86T90 577 aa8.34□□□□□ -1.07
CDH1-203ENST00000561751 TRIM6Q9C030 488 aaPredicted RBP8.34□□□□□ -1.07
CDH1-203ENST00000561751 NUCKS1Q9H1E3 243 aaKnown RBP8.34□□□□□ -1.07
CDH1-203ENST00000561751 PDRG1Q9NUG6 133 aa8.34□□□□□ -1.07
CDH1-203ENST00000561751 MRFAP1Q9Y605 127 aa8.34□□□□□ -1.07
CDH1-203ENST00000561751 CPSF1Q10570 1443 aaKnown RBP8.34□□□□□ -1.07
CDH1-203ENST00000561751 PHLPP1O60346 1717 aa8.34□□□□□ -1.07
CDH1-203ENST00000561751 TRPM2O94759 1503 aa8.34□□□□□ -1.08
CDH1-203ENST00000561751 SRCAPQ6ZRS2 3230 aa8.33□□□□□ -1.08
CDH1-203ENST00000561751 H3BQF6 201 aa8.33□□□□□ -1.08
CDH1-203ENST00000561751 TULP1O00294 542 aaPredicted RBP8.33□□□□□ -1.08
CDH1-203ENST00000561751 FIBPO43427 364 aa8.33□□□□□ -1.08
CDH1-203ENST00000561751 CBFA2T2O43439 604 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms