RNA–Protein interactions for RNA: ENST00000561638.1

TMEM249-201, Transcript of transmembrane protein 249, humanhuman

TSL 2

Gene TMEM249, Length 1,762 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM249-201ENST00000561638 EPS15P42566 896 aa27.99■■■□□ 2.07
TMEM249-201ENST00000561638 SAMD7Q7Z3H4 446 aa27.99■■■□□ 2.07
TMEM249-201ENST00000561638 CERS3Q8IU89 383 aa27.99■■■□□ 2.07
TMEM249-201ENST00000561638 LCORLQ8N3X6 602 aa27.99■■■□□ 2.07
TMEM249-201ENST00000561638 L3MBTL3Q96JM7 780 aaPredicted RBP27.99■■■□□ 2.07
TMEM249-201ENST00000561638 CCDC171Q6TFL3 1326 aa27.98■■■□□ 2.07
TMEM249-201ENST00000561638 SGSM2O43147 1006 aa27.98■■■□□ 2.07
TMEM249-201ENST00000561638 PLCG2P16885 1265 aa27.98■■■□□ 2.07
TMEM249-201ENST00000561638 C8orf34Q49A92 452 aa27.98■■■□□ 2.07
TMEM249-201ENST00000561638 TBC1D10BQ4KMP7 808 aaPredicted RBP27.98■■■□□ 2.07
TMEM249-201ENST00000561638 APOBEC3HQ6NTF7 200 aaKnown RBP27.98■■■□□ 2.07
TMEM249-201ENST00000561638 ZNF589Q86UQ0 364 aaPredicted RBP27.98■■■□□ 2.07
TMEM249-201ENST00000561638 RIOK1Q9BRS2 568 aaKnown RBP27.98■■■□□ 2.07
TMEM249-201ENST00000561638 SPDYE2BA6NHP3 402 aa27.97■■■□□ 2.07
TMEM249-201ENST00000561638 MYO1BO43795 1136 aa27.97■■■□□ 2.07
TMEM249-201ENST00000561638 SPDYE6P0CI01 402 aa27.97■■■□□ 2.07
TMEM249-201ENST00000561638 KIAA1211Q6ZU35 1233 aa27.97■■■□□ 2.07
TMEM249-201ENST00000561638 IL25Q9H293 177 aa27.97■■■□□ 2.07
TMEM249-201ENST00000561638 KIF4BQ2VIQ3 1234 aa27.96■■■□□ 2.07
TMEM249-201ENST00000561638 PRMT6Q96LA8 375 aaPredicted RBP27.96■■■□□ 2.07
TMEM249-201ENST00000561638 HACL1Q9UJ83 578 aa27.96■■■□□ 2.07
TMEM249-201ENST00000561638 IQCA1LA6NCM1 817 aa27.96■■■□□ 2.07
TMEM249-201ENST00000561638 PPP4CP60510 307 aa27.96■■■□□ 2.07
TMEM249-201ENST00000561638 CRNKL1Q9BZJ0 848 aaKnown RBP27.96■■■□□ 2.07
TMEM249-201ENST00000561638 USP40Q9NVE5 1235 aa27.96■■■□□ 2.07
TMEM249-201ENST00000561638 MTMR14Q8NCE2 650 aa27.95■■■□□ 2.06
TMEM249-201ENST00000561638 SH3RF3Q8TEJ3 882 aaPredicted RBP27.95■■■□□ 2.06
TMEM249-201ENST00000561638 STRBPQ96SI9 672 aaKnown RBP27.95■■■□□ 2.06
TMEM249-201ENST00000561638 EGFRP00533 1210 aa27.94■■■□□ 2.06
TMEM249-201ENST00000561638 APPP05067 770 aa27.94■■■□□ 2.06
TMEM249-201ENST00000561638 TEX11Q8IYF3 940 aa27.94■■■□□ 2.06
TMEM249-201ENST00000561638 ANO2Q9NQ90 1003 aa27.94■■■□□ 2.06
TMEM249-201ENST00000561638 ADARB2Q9NS39 739 aaKnown RBP27.94■■■□□ 2.06
TMEM249-201ENST00000561638 SLC4A4Q9Y6R1 1079 aa27.94■■■□□ 2.06
TMEM249-201ENST00000561638 WNT10BO00744 389 aa27.94■■■□□ 2.06
TMEM249-201ENST00000561638 GNAT2P19087 354 aa27.94■■■□□ 2.06
TMEM249-201ENST00000561638 CDC42EP5Q6NZY7 148 aa27.94■■■□□ 2.06
TMEM249-201ENST00000561638 TDRD3Q9H7E2 651 aaKnown RBP27.94■■■□□ 2.06
TMEM249-201ENST00000561638 TMOD2Q9NZR1 351 aa27.94■■■□□ 2.06
TMEM249-201ENST00000561638 REC8O95072 547 aa27.93■■■□□ 2.06
TMEM249-201ENST00000561638 NBPF9Q3BBW0 867 aa27.93■■■□□ 2.06
TMEM249-201ENST00000561638 ZNF526Q8TF50 670 aaPredicted RBP27.93■■■□□ 2.06
TMEM249-201ENST00000561638 EIF5BO60841 1220 aaKnown RBP27.92■■■□□ 2.06
TMEM249-201ENST00000561638 TRPM4Q8TD43 1214 aa27.92■■■□□ 2.06
TMEM249-201ENST00000561638 CLRN2A0PK11 232 aa27.91■■■□□ 2.06
TMEM249-201ENST00000561638 EPHX2P34913 555 aa27.91■■■□□ 2.06
TMEM249-201ENST00000561638 USP5P45974 858 aa27.91■■■□□ 2.06
TMEM249-201ENST00000561638 RHBDL3P58872 404 aa27.91■■■□□ 2.06
TMEM249-201ENST00000561638 DDRGK1Q96HY6 314 aa27.91■■■□□ 2.06
TMEM249-201ENST00000561638 SDR42E1Q8WUS8 393 aa27.91■■■□□ 2.06
TMEM249-201ENST00000561638 PRKAB2O43741 272 aa27.9■■■□□ 2.06
TMEM249-201ENST00000561638 VPS53Q5VIR6 699 aa27.9■■■□□ 2.06
TMEM249-201ENST00000561638 ZBED3Q96IU2 234 aaPredicted RBP27.9■■■□□ 2.06
TMEM249-201ENST00000561638 VEZTQ9HBM0 779 aa27.9■■■□□ 2.06
TMEM249-201ENST00000561638 CACNB3P54284 484 aa27.89■■■□□ 2.06
TMEM249-201ENST00000561638 PICALMQ13492 652 aa27.89■■■□□ 2.06
TMEM249-201ENST00000561638 TGFBRAP1Q8WUH2 860 aa27.89■■■□□ 2.06
TMEM249-201ENST00000561638 NACAP1Q9BZK3 213 aa27.89■■■□□ 2.06
TMEM249-201ENST00000561638 HSPD1P10809 573 aaKnown RBP27.88■■■□□ 2.05
TMEM249-201ENST00000561638 ZNF70Q9UC06 446 aaPredicted RBP27.88■■■□□ 2.05
TMEM249-201ENST00000561638 WDR90Q96KV7 1748 aa27.88■■■□□ 2.05
TMEM249-201ENST00000561638 SPDYE2Q495Y8 402 aa27.88■■■□□ 2.05
TMEM249-201ENST00000561638 SCN4AP35499 1836 aa27.88■■■□□ 2.05
TMEM249-201ENST00000561638 PATL2C9JE40 543 aaKnown RBP27.87■■■□□ 2.05
TMEM249-201ENST00000561638 MAPKAPK5Q8IW41 473 aa27.87■■■□□ 2.05
TMEM249-201ENST00000561638 TAF1DQ9H5J8 278 aaPredicted RBP27.87■■■□□ 2.05
TMEM249-201ENST00000561638 WDHD1O75717 1129 aaPredicted RBP27.86■■■□□ 2.05
TMEM249-201ENST00000561638 VEGFAP15692 232 aaPredicted RBP27.86■■■□□ 2.05
TMEM249-201ENST00000561638 TDO2P48775 406 aa27.86■■■□□ 2.05
TMEM249-201ENST00000561638 EAPPQ56P03 285 aaPredicted RBP27.86■■■□□ 2.05
TMEM249-201ENST00000561638 USP50Q70EL3 339 aaPredicted RBP27.86■■■□□ 2.05
TMEM249-201ENST00000561638 RRAGCQ9HB90 399 aa27.86■■■□□ 2.05
TMEM249-201ENST00000561638 ATP8A2Q9NTI2 1148 aa27.86■■■□□ 2.05
TMEM249-201ENST00000561638 GSG1L2A8MUP6 293 aa27.86■■■□□ 2.05
TMEM249-201ENST00000561638 DSCC1Q9BVC3 393 aa27.86■■■□□ 2.05
TMEM249-201ENST00000561638 NAPBQ9H115 298 aa27.86■■■□□ 2.05
TMEM249-201ENST00000561638 TCP10L2B9ZVM9 353 aa27.85■■■□□ 2.05
TMEM249-201ENST00000561638 HIRAP54198 1017 aaPredicted RBP27.85■■■□□ 2.05
TMEM249-201ENST00000561638 PTH1RQ03431 593 aa27.85■■■□□ 2.05
TMEM249-201ENST00000561638 NFIAQ12857 509 aa27.85■■■□□ 2.05
TMEM249-201ENST00000561638 PNMA8AQ86V59 439 aaPredicted RBP27.85■■■□□ 2.05
TMEM249-201ENST00000561638 BACH2Q9BYV9 841 aa27.85■■■□□ 2.05
TMEM249-201ENST00000561638 LSG1Q9H089 658 aaKnown RBP27.85■■■□□ 2.05
TMEM249-201ENST00000561638 FLT1P17948 1338 aa27.85■■■□□ 2.05
TMEM249-201ENST00000561638 RPAP1Q9BWH6 1393 aaPredicted RBP27.85■■■□□ 2.05
TMEM249-201ENST00000561638 POTECB2RU33 542 aa27.84■■■□□ 2.05
TMEM249-201ENST00000561638 ASTN2O75129 1339 aaPredicted RBP27.84■■■□□ 2.05
TMEM249-201ENST00000561638 SEC24BO95487 1268 aa27.84■■■□□ 2.05
TMEM249-201ENST00000561638 TCP10Q12799 353 aa27.84■■■□□ 2.05
TMEM249-201ENST00000561638 ANGEL2Q5VTE6 544 aaKnown RBP27.84■■■□□ 2.05
TMEM249-201ENST00000561638 DCP1AQ9NPI6 582 aaPredicted RBP27.84■■■□□ 2.05
TMEM249-201ENST00000561638 GGA3Q9NZ52 723 aa27.84■■■□□ 2.05
TMEM249-201ENST00000561638 IFNL3Q8IZI9 196 aa27.83■■■□□ 2.05
TMEM249-201ENST00000561638 IDI2Q9BXS1 227 aa27.83■■■□□ 2.05
TMEM249-201ENST00000561638 UPF2Q9HAU5 1272 aaKnown RBP27.83■■■□□ 2.05
TMEM249-201ENST00000561638 TNFAIP1Q13829 316 aa27.83■■■□□ 2.05
TMEM249-201ENST00000561638 EPB41L4AQ9HCS5 686 aaPredicted RBP27.83■■■□□ 2.05
TMEM249-201ENST00000561638 NMRK2Q9NPI5 230 aa27.83■■■□□ 2.05
TMEM249-201ENST00000561638 MCM9Q9NXL9 1143 aa27.83■■■□□ 2.05
TMEM249-201ENST00000561638 ECM29Q5VYK3 1845 aa27.83■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms