RNA–Protein interactions for RNA: ENST00000561514.1

PALB2-202, Transcript of partner and localizer of BRCA2, humanhuman

TSL 5

Gene PALB2, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-202ENST00000561514 PPIL2Q13356 520 aa10.53□□□□□ -0.72
PALB2-202ENST00000561514 ALDH1L2Q3SY69 923 aa10.53□□□□□ -0.72
PALB2-202ENST00000561514 ATG9AQ7Z3C6 839 aa10.53□□□□□ -0.72
PALB2-202ENST00000561514 TRMT2AQ8IZ69 625 aaKnown RBP10.53□□□□□ -0.72
PALB2-202ENST00000561514 FAM9BQ8IZU0 186 aa10.53□□□□□ -0.72
PALB2-202ENST00000561514 KLHDC4Q8TBB5 520 aa10.53□□□□□ -0.72
PALB2-202ENST00000561514 LPIN2Q92539 896 aa10.53□□□□□ -0.72
PALB2-202ENST00000561514 ZFYVE28Q9HCC9 887 aa10.53□□□□□ -0.72
PALB2-202ENST00000561514 ZNF112Q9UJU3 913 aa10.53□□□□□ -0.72
PALB2-202ENST00000561514 IQSEC3Q9UPP2 1182 aaPredicted RBP10.53□□□□□ -0.72
PALB2-202ENST00000561514 CSADQ9Y600 493 aa10.53□□□□□ -0.72
PALB2-202ENST00000561514 ADGRA2Q96PE1 1338 aa10.53□□□□□ -0.72
PALB2-202ENST00000561514 SALL1Q9NSC2 1324 aa10.53□□□□□ -0.72
PALB2-202ENST00000561514 RFX7Q2KHR2 1363 aa10.52□□□□□ -0.72
PALB2-202ENST00000561514 ATRNL1Q5VV63 1379 aa10.52□□□□□ -0.72
PALB2-202ENST00000561514 IRF6O14896 467 aa10.52□□□□□ -0.73
PALB2-202ENST00000561514 TLR2O60603 784 aa10.52□□□□□ -0.73
PALB2-202ENST00000561514 CIAO1O76071 339 aa10.52□□□□□ -0.73
PALB2-202ENST00000561514 CETPP11597 493 aa10.52□□□□□ -0.73
PALB2-202ENST00000561514 CACNB3P54284 484 aa10.52□□□□□ -0.73
PALB2-202ENST00000561514 TAF1CQ15572 869 aaPredicted RBP10.52□□□□□ -0.73
PALB2-202ENST00000561514 WDR66Q8TBY9 1149 aa10.52□□□□□ -0.73
PALB2-202ENST00000561514 GCC1Q96CN9 775 aa10.52□□□□□ -0.73
PALB2-202ENST00000561514 OTUD5Q96G74 571 aa10.52□□□□□ -0.73
PALB2-202ENST00000561514 WRNIP1Q96S55 665 aa10.52□□□□□ -0.73
PALB2-202ENST00000561514 TMOD2Q9NZR1 351 aa10.52□□□□□ -0.73
PALB2-202ENST00000561514 KCNH4Q9UQ05 1017 aa10.52□□□□□ -0.73
PALB2-202ENST00000561514 RBBP6Q7Z6E9 1792 aaKnown RBP10.52□□□□□ -0.73
PALB2-202ENST00000561514 CENPFP49454 3210 aa10.51□□□□□ -0.73
PALB2-202ENST00000561514 BTBD19C9JJ37 291 aa10.51□□□□□ -0.73
PALB2-202ENST00000561514 GNRH1P01148 92 aa10.51□□□□□ -0.73
PALB2-202ENST00000561514 CT47B1P0C2W7 299 aaPredicted RBP10.51□□□□□ -0.73
PALB2-202ENST00000561514 SLC5A1P13866 664 aa10.51□□□□□ -0.73
PALB2-202ENST00000561514 PPATQ06203 517 aa10.51□□□□□ -0.73
PALB2-202ENST00000561514 SNAPC2Q13487 334 aa10.51□□□□□ -0.73
PALB2-202ENST00000561514 ARHGEF6Q15052 776 aa10.51□□□□□ -0.73
PALB2-202ENST00000561514 NOL9Q5SY16 702 aaKnown RBP10.51□□□□□ -0.73
PALB2-202ENST00000561514 DCAF15Q66K64 600 aa10.51□□□□□ -0.73
PALB2-202ENST00000561514 FAM151AQ8WW52 585 aa10.51□□□□□ -0.73
PALB2-202ENST00000561514 DAGLAQ9Y4D2 1042 aa10.51□□□□□ -0.73
PALB2-202ENST00000561514 PTCH2Q9Y6C5 1203 aa10.51□□□□□ -0.73
PALB2-202ENST00000561514 PDS5AQ29RF7 1337 aaKnown RBP10.51□□□□□ -0.73
PALB2-202ENST00000561514 CEP290O15078 2479 aa10.5□□□□□ -0.73
PALB2-202ENST00000561514 SEMA3EO15041 775 aa10.5□□□□□ -0.73
PALB2-202ENST00000561514 FRAT2O75474 233 aaPredicted RBP10.5□□□□□ -0.73
PALB2-202ENST00000561514 LACTBP83111 547 aaPredicted RBP10.5□□□□□ -0.73
PALB2-202ENST00000561514 MOGSQ13724 837 aa10.5□□□□□ -0.73
PALB2-202ENST00000561514 C17orf99Q6UX52 265 aa10.5□□□□□ -0.73
PALB2-202ENST00000561514 ZKSCAN4Q969J2 545 aaPredicted RBP10.5□□□□□ -0.73
PALB2-202ENST00000561514 ZNF341Q9BYN7 854 aa10.5□□□□□ -0.73
PALB2-202ENST00000561514 GAKO14976 1311 aa10.5□□□□□ -0.73
PALB2-202ENST00000561514 INPP5BP32019 993 aa10.49□□□□□ -0.73
PALB2-202ENST00000561514 PRMT2P55345 433 aa10.49□□□□□ -0.73
PALB2-202ENST00000561514 MAP3K10Q02779 954 aa10.49□□□□□ -0.73
PALB2-202ENST00000561514 NFIAQ12857 509 aa10.49□□□□□ -0.73
PALB2-202ENST00000561514 CDC42EP5Q6NZY7 148 aa10.49□□□□□ -0.73
PALB2-202ENST00000561514 ANKRD23Q86SG2 305 aa10.49□□□□□ -0.73
PALB2-202ENST00000561514 FAM198AQ9UFP1 575 aa10.49□□□□□ -0.73
PALB2-202ENST00000561514 WDHD1O75717 1129 aaPredicted RBP10.48□□□□□ -0.73
PALB2-202ENST00000561514 EN2P19622 333 aaPredicted RBP10.48□□□□□ -0.73
PALB2-202ENST00000561514 PRDX5P30044 214 aa10.48□□□□□ -0.73
PALB2-202ENST00000561514 IL15P40933 162 aaPredicted RBP10.48□□□□□ -0.73
PALB2-202ENST00000561514 DIXDC1Q155Q3 683 aa10.48□□□□□ -0.73
PALB2-202ENST00000561514 ATP2B3Q16720 1220 aa10.48□□□□□ -0.73
PALB2-202ENST00000561514 SLC9C1Q4G0N8 1177 aa10.48□□□□□ -0.73
PALB2-202ENST00000561514 IDI2Q9BXS1 227 aa10.48□□□□□ -0.73
PALB2-202ENST00000561514 ARHGAP39Q9C0H5 1083 aa10.48□□□□□ -0.73
PALB2-202ENST00000561514 COPRSQ9NQ92 184 aa10.48□□□□□ -0.73
PALB2-202ENST00000561514 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.48□□□□□ -0.73
PALB2-202ENST00000561514 CXCL11O14625 94 aa10.47□□□□□ -0.73
PALB2-202ENST00000561514 ABCB7O75027 752 aa10.47□□□□□ -0.73
PALB2-202ENST00000561514 UBTFL1P0CB47 393 aaPredicted RBP10.47□□□□□ -0.73
PALB2-202ENST00000561514 CTGFP29279 349 aa10.47□□□□□ -0.73
PALB2-202ENST00000561514 MTX1Q13505 466 aa10.47□□□□□ -0.73
PALB2-202ENST00000561514 HABP4Q5JVS0 413 aaKnown RBP10.47□□□□□ -0.73
PALB2-202ENST00000561514 NBPF11Q86T75 865 aa10.47□□□□□ -0.73
PALB2-202ENST00000561514 FAM163AQ96GL9 167 aaPredicted RBP10.47□□□□□ -0.73
PALB2-202ENST00000561514 SMC4Q9NTJ3 1288 aa10.47□□□□□ -0.73
PALB2-202ENST00000561514 DENND2AQ9ULE3 1009 aa10.47□□□□□ -0.73
PALB2-202ENST00000561514 PHF20L1A8MW92 1017 aa10.46□□□□□ -0.73
PALB2-202ENST00000561514 ENTPD3O75355 529 aa10.46□□□□□ -0.73
PALB2-202ENST00000561514 LDHBP07195 334 aaKnown RBP10.46□□□□□ -0.73
PALB2-202ENST00000561514 BCRP11274 1271 aa10.46□□□□□ -0.73
PALB2-202ENST00000561514 PHKA1P46020 1223 aa10.46□□□□□ -0.73
PALB2-202ENST00000561514 MIGA2Q7L4E1 593 aa10.46□□□□□ -0.73
PALB2-202ENST00000561514 UBE2Q1Q7Z7E8 422 aa10.46□□□□□ -0.73
PALB2-202ENST00000561514 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.46□□□□□ -0.73
PALB2-202ENST00000561514 CDCA7LQ96GN5 454 aa10.46□□□□□ -0.73
PALB2-202ENST00000561514 TMEM106CQ9BVX2 250 aa10.46□□□□□ -0.73
PALB2-202ENST00000561514 API5Q9BZZ5 524 aaKnown RBP10.46□□□□□ -0.73
PALB2-202ENST00000561514 GNL3LQ9NVN8 582 aaKnown RBP10.46□□□□□ -0.73
PALB2-202ENST00000561514 CEP126Q9P2H0 1117 aa10.46□□□□□ -0.73
PALB2-202ENST00000561514 SRRDQ9UH36 339 aa10.46□□□□□ -0.73
PALB2-202ENST00000561514 HDAC5Q9UQL6 1122 aa10.46□□□□□ -0.73
PALB2-202ENST00000561514 RANBP2P49792 3224 aaKnown RBP10.45□□□□□ -0.74
PALB2-202ENST00000561514 TRIOBPQ9H2D6 2365 aa10.45□□□□□ -0.74
PALB2-202ENST00000561514 PDHXO00330 501 aa10.45□□□□□ -0.74
PALB2-202ENST00000561514 RASGRF1Q13972 1273 aa10.45□□□□□ -0.74
PALB2-202ENST00000561514 KIF22Q14807 665 aa10.45□□□□□ -0.74
PALB2-202ENST00000561514 CCDC102BQ68D86 513 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms