RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 AVENQ9NQS1 362 aaPredicted RBP2.54□□□□□ -2
RTF1-207ENST00000561076 PRDM11Q9NQV5 511 aa2.54□□□□□ -2
RTF1-207ENST00000561076 FBXO2Q9UK22 296 aaPredicted RBP2.54□□□□□ -2
RTF1-207ENST00000561076 LZTS1Q9Y250 596 aa2.54□□□□□ -2
RTF1-207ENST00000561076 DAAM1Q9Y4D1 1078 aa2.54□□□□□ -2
RTF1-207ENST00000561076 SPEF1Q9Y4P9 236 aa2.54□□□□□ -2
RTF1-207ENST00000561076 SCINQ9Y6U3 715 aa2.54□□□□□ -2
RTF1-207ENST00000561076 TK2O00142 265 aa2.53□□□□□ -2
RTF1-207ENST00000561076 PLD2O14939 933 aa2.53□□□□□ -2
RTF1-207ENST00000561076 AKAP10O43572 662 aa2.53□□□□□ -2
RTF1-207ENST00000561076 BRINP1O60477 761 aa2.53□□□□□ -2
RTF1-207ENST00000561076 SNUPNO95149 360 aaKnown RBP2.53□□□□□ -2
RTF1-207ENST00000561076 F13A1P00488 732 aa2.53□□□□□ -2
RTF1-207ENST00000561076 IL2RAP01589 272 aa2.53□□□□□ -2
RTF1-207ENST00000561076 FAM153BP0C7A2 387 aa2.53□□□□□ -2
RTF1-207ENST00000561076 PDE6BP35913 854 aa2.53□□□□□ -2
RTF1-207ENST00000561076 CCNFP41002 786 aa2.53□□□□□ -2
RTF1-207ENST00000561076 CASP2P42575 452 aa2.53□□□□□ -2
RTF1-207ENST00000561076 CASP7P55210 303 aa2.53□□□□□ -2
RTF1-207ENST00000561076 RPS26P62854 115 aaKnown RBP2.53□□□□□ -2
RTF1-207ENST00000561076 PURAQ00577 322 aaKnown RBP2.53□□□□□ -2
RTF1-207ENST00000561076 MCL1Q07820 350 aa2.53□□□□□ -2
RTF1-207ENST00000561076 MORC3Q14149 939 aa2.53□□□□□ -2
RTF1-207ENST00000561076 MAP7Q14244 749 aa2.53□□□□□ -2
RTF1-207ENST00000561076 LRRC41Q15345 812 aa2.53□□□□□ -2
RTF1-207ENST00000561076 MAPRE1Q15691 268 aaKnown RBP2.53□□□□□ -2
RTF1-207ENST00000561076 SLC4A8Q2Y0W8 1093 aa2.53□□□□□ -2
RTF1-207ENST00000561076 SV2CQ496J9 727 aa2.53□□□□□ -2
RTF1-207ENST00000561076 MINDY4Q4G0A6 757 aa2.53□□□□□ -2
RTF1-207ENST00000561076 AKAP4Q5JQC9 854 aa2.53□□□□□ -2
RTF1-207ENST00000561076 IER5Q5VY09 327 aa2.53□□□□□ -2
RTF1-207ENST00000561076 VHLLQ6RSH7 139 aa2.53□□□□□ -2
RTF1-207ENST00000561076 UBE2R2Q712K3 238 aaPredicted RBP2.53□□□□□ -2
RTF1-207ENST00000561076 CCDC84Q86UT8 332 aaPredicted RBP2.53□□□□□ -2
RTF1-207ENST00000561076 NLRP13Q86W25 1043 aa2.53□□□□□ -2
RTF1-207ENST00000561076 DGKHQ86XP1 1220 aa2.53□□□□□ -2
RTF1-207ENST00000561076 FAM169BQ8N8A8 192 aa2.53□□□□□ -2
RTF1-207ENST00000561076 C1orf127Q8N9H9 656 aa2.53□□□□□ -2
RTF1-207ENST00000561076 ZSCAN1Q8NBB4 408 aa2.53□□□□□ -2
RTF1-207ENST00000561076 SVIPQ8NHG7 77 aa2.53□□□□□ -2
RTF1-207ENST00000561076 DDX54Q8TDD1 881 aaKnown RBP2.53□□□□□ -2
RTF1-207ENST00000561076 RHBDD1Q8TEB9 315 aa2.53□□□□□ -2
RTF1-207ENST00000561076 GATAD2BQ8WXI9 593 aa2.53□□□□□ -2
RTF1-207ENST00000561076 HOOK2Q96ED9 719 aa2.53□□□□□ -2
RTF1-207ENST00000561076 SUSD3Q96L08 255 aa2.53□□□□□ -2
RTF1-207ENST00000561076 RHOVQ96L33 236 aa2.53□□□□□ -2
RTF1-207ENST00000561076 CEP63Q96MT8 703 aa2.53□□□□□ -2
RTF1-207ENST00000561076 PNMA5Q96PV4 448 aa2.53□□□□□ -2
RTF1-207ENST00000561076 YIPF4Q9BSR8 244 aa2.53□□□□□ -2
RTF1-207ENST00000561076 EPN3Q9H201 632 aa2.53□□□□□ -2
RTF1-207ENST00000561076 XPO5Q9HAV4 1204 aaKnown RBP eCLIP2.53□□□□□ -2
RTF1-207ENST00000561076 BRMS1Q9HCU9 246 aa2.53□□□□□ -2
RTF1-207ENST00000561076 TMEM63CQ9P1W3 806 aa2.53□□□□□ -2
RTF1-207ENST00000561076 DACH1Q9UI36 760 aa2.53□□□□□ -2
RTF1-207ENST00000561076 GTF2A1LQ9UNN4 478 aa2.53□□□□□ -2
RTF1-207ENST00000561076 USP20Q9Y2K6 914 aa2.53□□□□□ -2
RTF1-207ENST00000561076 MRPS23Q9Y3D9 190 aaKnown RBP2.53□□□□□ -2
RTF1-207ENST00000561076 GPC6Q9Y625 555 aaPredicted RBP2.53□□□□□ -2
RTF1-207ENST00000561076 DNAJC25-GNG10A0A024R161 153 aa2.52□□□□□ -2.01
RTF1-207ENST00000561076 TRAV20A0A0B4J274 112 aa2.52□□□□□ -2.01
RTF1-207ENST00000561076 A0A1W2PP55 124 aa2.52□□□□□ -2.01
RTF1-207ENST00000561076 VSTM5A8MXK1 200 aa2.52□□□□□ -2.01
RTF1-207ENST00000561076 B2RBV5 119 aa2.52□□□□□ -2.01
RTF1-207ENST00000561076 POTECB2RU33 542 aa2.52□□□□□ -2.01
RTF1-207ENST00000561076 SLC26A4O43511 780 aa2.52□□□□□ -2.01
RTF1-207ENST00000561076 KCNQ2O43526 872 aa2.52□□□□□ -2.01
RTF1-207ENST00000561076 OPA1O60313 960 aa2.52□□□□□ -2.01
RTF1-207ENST00000561076 RFPL3O75679 317 aa2.52□□□□□ -2.01
RTF1-207ENST00000561076 TCEA3O75764 348 aa2.52□□□□□ -2.01
RTF1-207ENST00000561076 RAPGEF3O95398 923 aa2.52□□□□□ -2.01
RTF1-207ENST00000561076 ADH1AP07327 375 aa2.52□□□□□ -2.01
RTF1-207ENST00000561076 CELA3AP09093 270 aa2.52□□□□□ -2.01
RTF1-207ENST00000561076 PYGMP11217 842 aa2.52□□□□□ -2.01
RTF1-207ENST00000561076 ZSCAN20P17040 1043 aaPredicted RBP2.52□□□□□ -2.01
RTF1-207ENST00000561076 BDNFP23560 247 aa2.52□□□□□ -2.01
RTF1-207ENST00000561076 COPB2P35606 906 aa2.52□□□□□ -2.01
RTF1-207ENST00000561076 GGCXP38435 758 aa2.52□□□□□ -2.01
RTF1-207ENST00000561076 CRKP46108 304 aa2.52□□□□□ -2.01
RTF1-207ENST00000561076 TMPRSS15P98073 1019 aa2.52□□□□□ -2.01
RTF1-207ENST00000561076 NR5A1Q13285 461 aa2.52□□□□□ -2.01
RTF1-207ENST00000561076 CLN3Q13286 438 aa2.52□□□□□ -2.01
RTF1-207ENST00000561076 PDE1CQ14123 709 aaPredicted RBP2.52□□□□□ -2.01
RTF1-207ENST00000561076 HSP90AA2PQ14568 343 aaPredicted RBP2.52□□□□□ -2.01
RTF1-207ENST00000561076 SETDB1Q15047 1291 aa2.52□□□□□ -2.01
RTF1-207ENST00000561076 ARHGAP29Q52LW3 1261 aa2.52□□□□□ -2.01
RTF1-207ENST00000561076 FNDC3BQ53EP0 1204 aaKnown RBP2.52□□□□□ -2.01
RTF1-207ENST00000561076 COBLL1Q53SF7 1204 aa2.52□□□□□ -2.01
RTF1-207ENST00000561076 INO80DQ53TQ3 878 aaPredicted RBP2.52□□□□□ -2.01
RTF1-207ENST00000561076 FAM102BQ5T8I3 360 aa2.52□□□□□ -2.01
RTF1-207ENST00000561076 IQSEC1Q6DN90 963 aa2.52□□□□□ -2.01
RTF1-207ENST00000561076 TTLL5Q6EMB2 1281 aa2.52□□□□□ -2.01
RTF1-207ENST00000561076 CXorf57Q6NSI4 855 aaKnown RBP2.52□□□□□ -2.01
RTF1-207ENST00000561076 C1orf228Q6PIY5 440 aa2.52□□□□□ -2.01
RTF1-207ENST00000561076 BNC2Q6ZN30 1099 aaPredicted RBP2.52□□□□□ -2.01
RTF1-207ENST00000561076 AGMOQ6ZNB7 445 aa2.52□□□□□ -2.01
RTF1-207ENST00000561076 REC114Q7Z4M0 266 aa2.52□□□□□ -2.01
RTF1-207ENST00000561076 TTC6Q86TZ1 520 aa2.52□□□□□ -2.01
RTF1-207ENST00000561076 PNMA8AQ86V59 439 aaPredicted RBP2.52□□□□□ -2.01
RTF1-207ENST00000561076 LRRTM3Q86VH5 581 aa2.52□□□□□ -2.01
RTF1-207ENST00000561076 LSRQ86X29 649 aaPredicted RBP2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms