RNA–Protein interactions for RNA: ENST00000561000.1

LINC01220-202, Transcript of long intergenic non-protein coding RNA 1220, humanhuman

TSL 5

Gene LINC01220, Length 159 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01220-202ENST00000561000 ZKSCAN4Q969J2 545 aaPredicted RBP23.18■■□□□ 1.3
LINC01220-202ENST00000561000 TCP10Q12799 353 aa23.17■■□□□ 1.3
LINC01220-202ENST00000561000 CCDC102BQ68D86 513 aa23.17■■□□□ 1.3
LINC01220-202ENST00000561000 OTOP1Q7RTM1 612 aa23.17■■□□□ 1.3
LINC01220-202ENST00000561000 CD99L2Q8TCZ2 262 aa23.17■■□□□ 1.3
LINC01220-202ENST00000561000 FAM151AQ8WW52 585 aa23.17■■□□□ 1.3
LINC01220-202ENST00000561000 ERO1AQ96HE7 468 aa23.17■■□□□ 1.3
LINC01220-202ENST00000561000 TNNQ9UQP3 1299 aa23.17■■□□□ 1.3
LINC01220-202ENST00000561000 ARAP2Q8WZ64 1704 aa23.16■■□□□ 1.3
LINC01220-202ENST00000561000 SEMA3EO15041 775 aa23.16■■□□□ 1.3
LINC01220-202ENST00000561000 CLUAP1Q96AJ1 413 aa23.16■■□□□ 1.3
LINC01220-202ENST00000561000 USP40Q9NVE5 1235 aa23.16■■□□□ 1.3
LINC01220-202ENST00000561000 SNCAIPQ9Y6H5 919 aa23.16■■□□□ 1.3
LINC01220-202ENST00000561000 SPDYE5A6NIY4 337 aa23.15■■□□□ 1.3
LINC01220-202ENST00000561000 TRIM27P14373 513 aa23.15■■□□□ 1.3
LINC01220-202ENST00000561000 SP3Q02447 781 aa23.15■■□□□ 1.3
LINC01220-202ENST00000561000 TFCP2Q12800 502 aa23.15■■□□□ 1.3
LINC01220-202ENST00000561000 TAF1CQ15572 869 aaPredicted RBP23.15■■□□□ 1.3
LINC01220-202ENST00000561000 ATF7IPQ6VMQ6 1270 aa23.15■■□□□ 1.3
LINC01220-202ENST00000561000 ERO1BQ86YB8 467 aa23.15■■□□□ 1.3
LINC01220-202ENST00000561000 ZNF341Q9BYN7 854 aa23.15■■□□□ 1.3
LINC01220-202ENST00000561000 SALL1Q9NSC2 1324 aa23.14■■□□□ 1.3
LINC01220-202ENST00000561000 NFIAQ12857 509 aa23.14■■□□□ 1.29
LINC01220-202ENST00000561000 ZFYVE28Q9HCC9 887 aa23.14■■□□□ 1.29
LINC01220-202ENST00000561000 AKAP2Q9Y2D5 859 aa23.14■■□□□ 1.29
LINC01220-202ENST00000561000 FAM43AQ8N2R8 423 aa23.13■■□□□ 1.29
LINC01220-202ENST00000561000 NEUROD6Q96NK8 337 aa23.13■■□□□ 1.29
LINC01220-202ENST00000561000 EFCC1Q9HA90 598 aa23.13■■□□□ 1.29
LINC01220-202ENST00000561000 ABCF2Q9UG63 623 aa23.13■■□□□ 1.29
LINC01220-202ENST00000561000 A0A1B0GUL7 405 aa23.12■■□□□ 1.29
LINC01220-202ENST00000561000 GNAI2P04899 355 aa23.12■■□□□ 1.29
LINC01220-202ENST00000561000 CETPP11597 493 aa23.12■■□□□ 1.29
LINC01220-202ENST00000561000 INPP5BP32019 993 aa23.12■■□□□ 1.29
LINC01220-202ENST00000561000 MTX1Q13505 466 aa23.12■■□□□ 1.29
LINC01220-202ENST00000561000 RASGRF1Q13972 1273 aa23.12■■□□□ 1.29
LINC01220-202ENST00000561000 ZGPATQ8N5A5 531 aaKnown RBP23.12■■□□□ 1.29
LINC01220-202ENST00000561000 XAGE2Q96GT9 111 aa23.12■■□□□ 1.29
LINC01220-202ENST00000561000 IRF6O14896 467 aa23.11■■□□□ 1.29
LINC01220-202ENST00000561000 SNAPC2Q13487 334 aa23.11■■□□□ 1.29
LINC01220-202ENST00000561000 FAM198AQ9UFP1 575 aa23.11■■□□□ 1.29
LINC01220-202ENST00000561000 RPAP1Q9BWH6 1393 aaPredicted RBP23.11■■□□□ 1.29
LINC01220-202ENST00000561000 WDHD1O75717 1129 aaPredicted RBP23.1■■□□□ 1.29
LINC01220-202ENST00000561000 PPIL2Q13356 520 aa23.1■■□□□ 1.29
LINC01220-202ENST00000561000 MVPQ14764 893 aaKnown RBP23.1■■□□□ 1.29
LINC01220-202ENST00000561000 DZIP1Q86YF9 867 aaKnown RBP23.1■■□□□ 1.29
LINC01220-202ENST00000561000 ZFPM1Q8IX07 1006 aa23.1■■□□□ 1.29
LINC01220-202ENST00000561000 PTPN22Q9Y2R2 807 aa23.1■■□□□ 1.29
LINC01220-202ENST00000561000 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.1■■□□□ 1.29
LINC01220-202ENST00000561000 BTBD19C9JJ37 291 aa23.09■■□□□ 1.29
LINC01220-202ENST00000561000 G3BP1Q13283 466 aaKnown RBP eCLIP23.09■■□□□ 1.29
LINC01220-202ENST00000561000 GORABQ5T7V8 394 aa23.09■■□□□ 1.29
LINC01220-202ENST00000561000 SPTY2D1Q68D10 685 aaPredicted RBP23.09■■□□□ 1.29
LINC01220-202ENST00000561000 ZBTB22O15209 634 aa23.08■■□□□ 1.29
LINC01220-202ENST00000561000 CAP1Q01518 475 aa23.08■■□□□ 1.29
LINC01220-202ENST00000561000 PPATQ06203 517 aa23.08■■□□□ 1.29
LINC01220-202ENST00000561000 SLF2Q8IX21 1173 aa23.08■■□□□ 1.29
LINC01220-202ENST00000561000 ZNF112Q9UJU3 913 aa23.08■■□□□ 1.29
LINC01220-202ENST00000561000 OTOFQ9HC10 1997 aa23.08■■□□□ 1.29
LINC01220-202ENST00000561000 PNMA6EA0A0J9YXQ4 647 aa23.07■■□□□ 1.28
LINC01220-202ENST00000561000 RGS3P49796 1198 aa23.07■■□□□ 1.28
LINC01220-202ENST00000561000 ZKSCAN2Q63HK3 967 aa23.07■■□□□ 1.28
LINC01220-202ENST00000561000 TMEM57Q8N5G2 664 aa23.07■■□□□ 1.28
LINC01220-202ENST00000561000 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.07■■□□□ 1.28
LINC01220-202ENST00000561000 ARHGEF6Q15052 776 aa23.06■■□□□ 1.28
LINC01220-202ENST00000561000 ERICH6Q7L0X2 663 aa23.06■■□□□ 1.28
LINC01220-202ENST00000561000 ZSCAN29Q8IWY8 852 aaPredicted RBP23.06■■□□□ 1.28
LINC01220-202ENST00000561000 GAKO14976 1311 aa23.06■■□□□ 1.28
LINC01220-202ENST00000561000 PDS5AQ29RF7 1337 aaKnown RBP23.06■■□□□ 1.28
LINC01220-202ENST00000561000 BTDP43251 543 aa23.05■■□□□ 1.28
LINC01220-202ENST00000561000 IDI2Q9BXS1 227 aa23.05■■□□□ 1.28
LINC01220-202ENST00000561000 ZBED9Q6R2W3 1325 aa23.05■■□□□ 1.28
LINC01220-202ENST00000561000 TLR2O60603 784 aa23.04■■□□□ 1.28
LINC01220-202ENST00000561000 ENTPD3O75355 529 aa23.04■■□□□ 1.28
LINC01220-202ENST00000561000 MECOMQ03112 1051 aa23.04■■□□□ 1.28
LINC01220-202ENST00000561000 PICALMQ13492 652 aa23.04■■□□□ 1.28
LINC01220-202ENST00000561000 FAM163AQ96GL9 167 aaPredicted RBP23.04■■□□□ 1.28
LINC01220-202ENST00000561000 HMG20BQ9P0W2 317 aa23.04■■□□□ 1.28
LINC01220-202ENST00000561000 PI16Q6UXB8 463 aa23.03■■□□□ 1.28
LINC01220-202ENST00000561000 TBC1D9Q6ZT07 1266 aa23.03■■□□□ 1.28
LINC01220-202ENST00000561000 SPATA5Q8NB90 893 aa23.03■■□□□ 1.28
LINC01220-202ENST00000561000 ZCCHC17Q9NP64 241 aaKnown RBP23.03■■□□□ 1.28
LINC01220-202ENST00000561000 ECM2O94769 699 aaPredicted RBP23.02■■□□□ 1.28
LINC01220-202ENST00000561000 KIF22Q14807 665 aa23.02■■□□□ 1.28
LINC01220-202ENST00000561000 NOL9Q5SY16 702 aaKnown RBP23.02■■□□□ 1.28
LINC01220-202ENST00000561000 SH3BP5LQ7L8J4 393 aa23.02■■□□□ 1.28
LINC01220-202ENST00000561000 DDX4Q9NQI0 724 aaKnown RBP23.02■■□□□ 1.28
LINC01220-202ENST00000561000 KCNH4Q9UQ05 1017 aa23.02■■□□□ 1.28
LINC01220-202ENST00000561000 MROH7-TTC4A0A0A0MT08 1334 aa23.02■■□□□ 1.28
LINC01220-202ENST00000561000 POTEFA5A3E0 1075 aa23.01■■□□□ 1.27
LINC01220-202ENST00000561000 ANKRD23Q86SG2 305 aa23.01■■□□□ 1.27
LINC01220-202ENST00000561000 RAI14Q9P0K7 980 aa23.01■■□□□ 1.27
LINC01220-202ENST00000561000 MYH13Q9UKX3 1938 aa23■■□□□ 1.27
LINC01220-202ENST00000561000 LAMB1P07942 1786 aa23■■□□□ 1.27
LINC01220-202ENST00000561000 GPR75-ASB3A0A0A6YYF3 556 aa23■■□□□ 1.27
LINC01220-202ENST00000561000 DDTLA6NHG4 134 aaPredicted RBP23■■□□□ 1.27
LINC01220-202ENST00000561000 PHF20L1A8MW92 1017 aa23■■□□□ 1.27
LINC01220-202ENST00000561000 PDHXO00330 501 aa23■■□□□ 1.27
LINC01220-202ENST00000561000 OS9Q13438 667 aaPredicted RBP23■■□□□ 1.27
LINC01220-202ENST00000561000 FTSJ3Q8IY81 847 aaKnown RBP23■■□□□ 1.27
LINC01220-202ENST00000561000 ARHGAP39Q9C0H5 1083 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms