RNA–Protein interactions for RNA: ENST00000560320.1

CRTC3-209, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 4

Gene CRTC3, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-209ENST00000560320 SH2B1Q9NRF2 756 aaPredicted RBP12.59□□□□□ -0.39
CRTC3-209ENST00000560320 ZNF219Q9P2Y4 722 aaPredicted RBP12.59□□□□□ -0.39
CRTC3-209ENST00000560320 BAZ2AQ9UIF9 1905 aaKnown RBP12.58□□□□□ -0.39
CRTC3-209ENST00000560320 E7EWF7 191 aa12.58□□□□□ -0.4
CRTC3-209ENST00000560320 BAG3O95817 575 aa12.58□□□□□ -0.4
CRTC3-209ENST00000560320 TGFB2P61812 414 aa12.58□□□□□ -0.4
CRTC3-209ENST00000560320 SOGA3Q5TF21 947 aa12.58□□□□□ -0.4
CRTC3-209ENST00000560320 IFNL3Q8IZI9 196 aa12.58□□□□□ -0.4
CRTC3-209ENST00000560320 LCORLQ8N3X6 602 aa12.58□□□□□ -0.4
CRTC3-209ENST00000560320 NCOA7Q8NI08 942 aa12.58□□□□□ -0.4
CRTC3-209ENST00000560320 CHMP4CQ96CF2 233 aa12.58□□□□□ -0.4
CRTC3-209ENST00000560320 FOXD4L1Q9NU39 408 aa12.58□□□□□ -0.4
CRTC3-209ENST00000560320 JAG2Q9Y219 1238 aa12.58□□□□□ -0.4
CRTC3-209ENST00000560320 SUGT1Q9Y2Z0 365 aa12.58□□□□□ -0.4
CRTC3-209ENST00000560320 FAM205AQ6ZU69 1335 aa12.58□□□□□ -0.4
CRTC3-209ENST00000560320 LAMB1P07942 1786 aa12.57□□□□□ -0.4
CRTC3-209ENST00000560320 CPA1P15085 419 aa12.57□□□□□ -0.4
CRTC3-209ENST00000560320 PRDX5P30044 214 aa12.57□□□□□ -0.4
CRTC3-209ENST00000560320 HAND2P61296 217 aa12.57□□□□□ -0.4
CRTC3-209ENST00000560320 CCDC93Q567U6 631 aa12.57□□□□□ -0.4
CRTC3-209ENST00000560320 MFSD14BQ5SR56 506 aa12.57□□□□□ -0.4
CRTC3-209ENST00000560320 TTLL5Q6EMB2 1281 aa12.57□□□□□ -0.4
CRTC3-209ENST00000560320 DHX32Q7L7V1 743 aaKnown RBP12.57□□□□□ -0.4
CRTC3-209ENST00000560320 SLC51AQ86UW1 340 aa12.57□□□□□ -0.4
CRTC3-209ENST00000560320 RTKN2Q8IZC4 609 aa12.57□□□□□ -0.4
CRTC3-209ENST00000560320 INTS4Q96HW7 963 aaKnown RBP12.57□□□□□ -0.4
CRTC3-209ENST00000560320 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.57□□□□□ -0.4
CRTC3-209ENST00000560320 GSG1L2A8MUP6 293 aa12.56□□□□□ -0.4
CRTC3-209ENST00000560320 PLCG2P16885 1265 aa12.56□□□□□ -0.4
CRTC3-209ENST00000560320 GTF2IP78347 998 aa12.56□□□□□ -0.4
CRTC3-209ENST00000560320 CUL4AQ13619 759 aa12.56□□□□□ -0.4
CRTC3-209ENST00000560320 GIMAP6Q6P9H5 292 aa12.56□□□□□ -0.4
CRTC3-209ENST00000560320 PODNQ7Z5L7 613 aa12.56□□□□□ -0.4
CRTC3-209ENST00000560320 AMOTL1Q8IY63 956 aa12.56□□□□□ -0.4
CRTC3-209ENST00000560320 RTFDC1Q9BY42 306 aaPredicted RBP12.56□□□□□ -0.4
CRTC3-209ENST00000560320 RNF41Q9H4P4 317 aaPredicted RBP12.56□□□□□ -0.4
CRTC3-209ENST00000560320 CNNM2Q9H8M5 875 aa12.56□□□□□ -0.4
CRTC3-209ENST00000560320 NAV1Q8NEY1 1877 aa12.55□□□□□ -0.4
CRTC3-209ENST00000560320 TIAM2Q8IVF5 1701 aa12.55□□□□□ -0.4
CRTC3-209ENST00000560320 SLC3A2P08195 630 aaKnown RBP12.55□□□□□ -0.4
CRTC3-209ENST00000560320 DPEP1P16444 411 aa12.55□□□□□ -0.4
CRTC3-209ENST00000560320 MCM5P33992 734 aa12.55□□□□□ -0.4
CRTC3-209ENST00000560320 DYNLL1P63167 89 aaKnown RBP12.55□□□□□ -0.4
CRTC3-209ENST00000560320 NUCB2P80303 420 aa12.55□□□□□ -0.4
CRTC3-209ENST00000560320 FSTL1Q12841 308 aa12.55□□□□□ -0.4
CRTC3-209ENST00000560320 DOK7Q18PE1 504 aa12.55□□□□□ -0.4
CRTC3-209ENST00000560320 OLFM4Q6UX06 510 aa12.55□□□□□ -0.4
CRTC3-209ENST00000560320 Q6ZUG5 572 aa12.55□□□□□ -0.4
CRTC3-209ENST00000560320 RIOK1Q9BRS2 568 aaKnown RBP12.55□□□□□ -0.4
CRTC3-209ENST00000560320 KRT23Q9C075 422 aa12.55□□□□□ -0.4
CRTC3-209ENST00000560320 NMRK2Q9NPI5 230 aa12.55□□□□□ -0.4
CRTC3-209ENST00000560320 ATP8A2Q9NTI2 1148 aa12.55□□□□□ -0.4
CRTC3-209ENST00000560320 AATFQ9NY61 560 aaKnown RBP eCLIP12.55□□□□□ -0.4
CRTC3-209ENST00000560320 PIM2Q9P1W9 311 aa12.55□□□□□ -0.4
CRTC3-209ENST00000560320 MROH7-TTC4A0A0A0MT08 1334 aa12.55□□□□□ -0.4
CRTC3-209ENST00000560320 A0A0G2JLW4 131 aa12.54□□□□□ -0.4
CRTC3-209ENST00000560320 FOXP2O15409 715 aa12.54□□□□□ -0.4
CRTC3-209ENST00000560320 C21orf2O43822 256 aa12.54□□□□□ -0.4
CRTC3-209ENST00000560320 USP5P45974 858 aa12.54□□□□□ -0.4
CRTC3-209ENST00000560320 MFSD6Q6ZSS7 791 aa12.54□□□□□ -0.4
CRTC3-209ENST00000560320 STOX1Q6ZVD7 989 aa12.54□□□□□ -0.4
CRTC3-209ENST00000560320 ADGRA1Q86SQ6 560 aa12.54□□□□□ -0.4
CRTC3-209ENST00000560320 CD2APQ9Y5K6 639 aa12.54□□□□□ -0.4
CRTC3-209ENST00000560320 TAF6LQ9Y6J9 622 aa12.54□□□□□ -0.4
CRTC3-209ENST00000560320 CDK5RAP2Q96SN8 1893 aa12.54□□□□□ -0.4
CRTC3-209ENST00000560320 WDR19Q8NEZ3 1342 aa12.54□□□□□ -0.4
CRTC3-209ENST00000560320 MYH1P12882 1939 aa12.54□□□□□ -0.4
CRTC3-209ENST00000560320 PSME4Q14997 1843 aa12.53□□□□□ -0.4
CRTC3-209ENST00000560320 MINDY4BA8MYZ0 360 aa12.53□□□□□ -0.4
CRTC3-209ENST00000560320 PPIP5K2O43314 1243 aa12.53□□□□□ -0.4
CRTC3-209ENST00000560320 PRC1O43663 620 aa12.53□□□□□ -0.4
CRTC3-209ENST00000560320 PRKAB2O43741 272 aa12.53□□□□□ -0.4
CRTC3-209ENST00000560320 ECE2O60344 883 aa12.53□□□□□ -0.4
CRTC3-209ENST00000560320 KIAA2012Q0VF49 1180 aa12.53□□□□□ -0.4
CRTC3-209ENST00000560320 AKNAD1Q5T1N1 836 aa12.53□□□□□ -0.4
CRTC3-209ENST00000560320 SDR42E1Q8WUS8 393 aa12.53□□□□□ -0.4
CRTC3-209ENST00000560320 C7orf43Q8WVR3 580 aa12.53□□□□□ -0.4
CRTC3-209ENST00000560320 TCEANC2Q96MN5 208 aa12.53□□□□□ -0.4
CRTC3-209ENST00000560320 VPS33BQ9H267 617 aa12.53□□□□□ -0.4
CRTC3-209ENST00000560320 EPB41L4AQ9HCS5 686 aaPredicted RBP12.53□□□□□ -0.4
CRTC3-209ENST00000560320 TOMM22Q9NS69 142 aa12.53□□□□□ -0.4
CRTC3-209ENST00000560320 SMC3Q9UQE7 1217 aa12.53□□□□□ -0.4
CRTC3-209ENST00000560320 BRCA1P38398 1863 aaKnown RBP12.53□□□□□ -0.4
CRTC3-209ENST00000560320 PCP11498 1178 aaKnown RBP12.52□□□□□ -0.41
CRTC3-209ENST00000560320 PPP4CP60510 307 aa12.52□□□□□ -0.41
CRTC3-209ENST00000560320 FKBP1AP62942 108 aaKnown RBP12.52□□□□□ -0.41
CRTC3-209ENST00000560320 EXOSC10Q01780 885 aaKnown RBP12.52□□□□□ -0.41
CRTC3-209ENST00000560320 PPARAQ07869 468 aa12.52□□□□□ -0.41
CRTC3-209ENST00000560320 TOB2Q14106 344 aaPredicted RBP12.52□□□□□ -0.41
CRTC3-209ENST00000560320 SART3Q15020 963 aaKnown RBP12.52□□□□□ -0.41
CRTC3-209ENST00000560320 CCDC83Q8IWF9 413 aa12.52□□□□□ -0.41
CRTC3-209ENST00000560320 ZNF384Q8TF68 577 aa12.52□□□□□ -0.41
CRTC3-209ENST00000560320 STAG1Q8WVM7 1258 aa12.52□□□□□ -0.41
CRTC3-209ENST00000560320 BRF1Q92994 677 aa12.52□□□□□ -0.41
CRTC3-209ENST00000560320 FAM163AQ96GL9 167 aaPredicted RBP12.52□□□□□ -0.41
CRTC3-209ENST00000560320 PSMD1Q99460 953 aa12.52□□□□□ -0.41
CRTC3-209ENST00000560320 DBNDD1Q9H9R9 158 aa12.52□□□□□ -0.41
CRTC3-209ENST00000560320 ARPP21Q9UBL0 812 aaPredicted RBP12.52□□□□□ -0.41
CRTC3-209ENST00000560320 NAP1L2Q9ULW6 460 aaPredicted RBP12.52□□□□□ -0.41
CRTC3-209ENST00000560320 FOCADQ5VW36 1801 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms