RNA–Protein interactions for RNA: ENST00000560013.5

TM2D3-209, Transcript of TM2 domain containing 3, human

TSL 2

Gene TM2D3, Length 1,868 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TM2D3-209	ENST00000560013	GBP4	Q96PP9	640 aa		27.78	■■■□□ 2.04
TM2D3-209	ENST00000560013	ZDHHC9	Q9Y397	364 aa		27.78	■■■□□ 2.04
TM2D3-209	ENST00000560013	FAM205A	Q6ZU69	1335 aa		27.78	■■■□□ 2.04
TM2D3-209	ENST00000560013	BAZ2A	Q9UIF9	1905 aa	Known RBP	27.78	■■■□□ 2.04
TM2D3-209	ENST00000560013	CTDSPL2	Q05D32	466 aa		27.77	■■■□□ 2.04
TM2D3-209	ENST00000560013	STK3	Q13188	491 aa		27.77	■■■□□ 2.04
TM2D3-209	ENST00000560013	GRIK5	Q16478	980 aa		27.77	■■■□□ 2.04
TM2D3-209	ENST00000560013	MFSD14B	Q5SR56	506 aa		27.76	■■■□□ 2.04
TM2D3-209	ENST00000560013	AKNAD1	Q5T1N1	836 aa		27.76	■■■□□ 2.04
TM2D3-209	ENST00000560013	CRNKL1	Q9BZJ0	848 aa	Known RBP	27.76	■■■□□ 2.04
TM2D3-209	ENST00000560013	DLEC1	Q9Y238	1755 aa		27.76	■■■□□ 2.03
TM2D3-209	ENST00000560013	LDHC	P07864	332 aa		27.76	■■■□□ 2.03
TM2D3-209	ENST00000560013	ANTXR2	P58335	489 aa		27.76	■■■□□ 2.03
TM2D3-209	ENST00000560013	APOBR	Q0VD83	1088 aa		27.76	■■■□□ 2.03
TM2D3-209	ENST00000560013	CLEC17A	Q6ZS10	378 aa		27.76	■■■□□ 2.03
TM2D3-209	ENST00000560013	GTF3C6	Q969F1	213 aa		27.76	■■■□□ 2.03
TM2D3-209	ENST00000560013	CNNM2	Q9H8M5	875 aa		27.75	■■■□□ 2.03
TM2D3-209	ENST00000560013	BRD1	O95696	1058 aa		27.74	■■■□□ 2.03
TM2D3-209	ENST00000560013	GJB2	P29033	226 aa		27.74	■■■□□ 2.03
TM2D3-209	ENST00000560013	NEDD4	P46934	1319 aa		27.74	■■■□□ 2.03
TM2D3-209	ENST00000560013	GTF2I	P78347	998 aa		27.74	■■■□□ 2.03
TM2D3-209	ENST00000560013	PPARA	Q07869	468 aa		27.74	■■■□□ 2.03
TM2D3-209	ENST00000560013	MFSD6	Q6ZSS7	791 aa		27.74	■■■□□ 2.03
TM2D3-209	ENST00000560013	STAG1	Q8WVM7	1258 aa		27.74	■■■□□ 2.03
TM2D3-209	ENST00000560013	C7orf43	Q8WVR3	580 aa		27.74	■■■□□ 2.03
TM2D3-209	ENST00000560013	ZNF274	Q96GC6	653 aa	Predicted RBP	27.74	■■■□□ 2.03
TM2D3-209	ENST00000560013		B4E1Z4	1266 aa		27.74	■■■□□ 2.03
TM2D3-209	ENST00000560013	EVC	P57679	992 aa		27.74	■■■□□ 2.03
TM2D3-209	ENST00000560013	ATP8A2	Q9NTI2	1148 aa		27.74	■■■□□ 2.03
TM2D3-209	ENST00000560013	ANAPC4	Q9UJX5	808 aa		27.74	■■■□□ 2.03
TM2D3-209	ENST00000560013	PFKFB2	O60825	505 aa		27.73	■■■□□ 2.03
TM2D3-209	ENST00000560013	DIXDC1	Q155Q3	683 aa		27.73	■■■□□ 2.03
TM2D3-209	ENST00000560013	CC2D2B	Q6DHV5	1058 aa		27.73	■■■□□ 2.03
TM2D3-209	ENST00000560013	KRT23	Q9C075	422 aa		27.73	■■■□□ 2.03
TM2D3-209	ENST00000560013	ZNF219	Q9P2Y4	722 aa	Predicted RBP	27.73	■■■□□ 2.03
TM2D3-209	ENST00000560013	MINDY4B	A8MYZ0	360 aa		27.72	■■■□□ 2.03
TM2D3-209	ENST00000560013		G3V3G9	751 aa		27.72	■■■□□ 2.03
TM2D3-209	ENST00000560013	BAG3	O95817	575 aa		27.72	■■■□□ 2.03
TM2D3-209	ENST00000560013	DCAF8	Q5TAQ9	597 aa		27.72	■■■□□ 2.03
TM2D3-209	ENST00000560013	CYB5R4	Q7L1T6	521 aa		27.72	■■■□□ 2.03
TM2D3-209	ENST00000560013	RNF41	Q9H4P4	317 aa	Predicted RBP	27.72	■■■□□ 2.03
TM2D3-209	ENST00000560013	INCENP	Q9NQS7	918 aa		27.72	■■■□□ 2.03
TM2D3-209	ENST00000560013	MROH7-TTC4	A0A0A0MT08	1334 aa		27.72	■■■□□ 2.03
TM2D3-209	ENST00000560013	PPP4C	P60510	307 aa		27.72	■■■□□ 2.03
TM2D3-209	ENST00000560013	DOK7	Q18PE1	504 aa		27.72	■■■□□ 2.03
TM2D3-209	ENST00000560013	NOL10	Q9BSC4	688 aa	Known RBP	27.72	■■■□□ 2.03
TM2D3-209	ENST00000560013	RTFDC1	Q9BY42	306 aa	Predicted RBP	27.72	■■■□□ 2.03
TM2D3-209	ENST00000560013	TACC3	Q9Y6A5	838 aa		27.72	■■■□□ 2.03
TM2D3-209	ENST00000560013	SCRN1	Q12765	414 aa		27.71	■■■□□ 2.03
TM2D3-209	ENST00000560013	DCP1A	Q9NPI6	582 aa	Predicted RBP	27.71	■■■□□ 2.03
TM2D3-209	ENST00000560013	KIF13B	Q9NQT8	1826 aa		27.71	■■■□□ 2.03
TM2D3-209	ENST00000560013	PDIA3	P30101	505 aa	Known RBP	27.7	■■■□□ 2.03
TM2D3-209	ENST00000560013	SLF2	Q8IX21	1173 aa		27.7	■■■□□ 2.03
TM2D3-209	ENST00000560013	NKX2-3	Q8TAU0	364 aa		27.7	■■■□□ 2.03
TM2D3-209	ENST00000560013	GPHN	Q9NQX3	736 aa	Predicted RBP	27.7	■■■□□ 2.03
TM2D3-209	ENST00000560013	WDR33	Q9C0J8	1336 aa	Known RBP	27.7	■■■□□ 2.02
TM2D3-209	ENST00000560013	SYT1	P21579	422 aa		27.7	■■■□□ 2.02
TM2D3-209	ENST00000560013	CTR9	Q6PD62	1173 aa		27.7	■■■□□ 2.02
TM2D3-209	ENST00000560013	CERS3	Q8IU89	383 aa		27.7	■■■□□ 2.02
TM2D3-209	ENST00000560013	TMEM87B	Q96K49	555 aa		27.7	■■■□□ 2.02
TM2D3-209	ENST00000560013	SUGT1	Q9Y2Z0	365 aa		27.7	■■■□□ 2.02
TM2D3-209	ENST00000560013	DDX11L8	A8MPP1	907 aa		27.69	■■■□□ 2.02
TM2D3-209	ENST00000560013	BAG4	O95429	457 aa	Known RBP	27.69	■■■□□ 2.02
TM2D3-209	ENST00000560013	PODN	Q7Z5L7	613 aa		27.69	■■■□□ 2.02
TM2D3-209	ENST00000560013	FAM163A	Q96GL9	167 aa	Predicted RBP	27.69	■■■□□ 2.02
TM2D3-209	ENST00000560013	ZSWIM5	Q9P217	1185 aa		27.69	■■■□□ 2.02
TM2D3-209	ENST00000560013	USP17L12	C9JPN9	530 aa		27.68	■■■□□ 2.02
TM2D3-209	ENST00000560013	USP17L21	D6R901	530 aa		27.68	■■■□□ 2.02
TM2D3-209	ENST00000560013	KDM4A	O75164	1064 aa		27.68	■■■□□ 2.02
TM2D3-209	ENST00000560013	TTLL6	Q8N841	843 aa		27.68	■■■□□ 2.02
TM2D3-209	ENST00000560013	CHMP4C	Q96CF2	233 aa		27.68	■■■□□ 2.02
TM2D3-209	ENST00000560013	NAP1L2	Q9ULW6	460 aa	Predicted RBP	27.68	■■■□□ 2.02
TM2D3-209	ENST00000560013	ANGEL1	Q9UNK9	670 aa	Known RBP	27.68	■■■□□ 2.02
TM2D3-209	ENST00000560013	STX6	O43752	255 aa		27.68	■■■□□ 2.02
TM2D3-209	ENST00000560013	ILDR1	Q86SU0	546 aa	Predicted RBP	27.68	■■■□□ 2.02
TM2D3-209	ENST00000560013	FBXW7	Q969H0	707 aa		27.68	■■■□□ 2.02
TM2D3-209	ENST00000560013	LLPH	Q9BRT6	129 aa	Known RBP	27.68	■■■□□ 2.02
TM2D3-209	ENST00000560013	LAMB1	P07942	1786 aa		27.68	■■■□□ 2.02
TM2D3-209	ENST00000560013	SNED1	Q8TER0	1413 aa		27.67	■■■□□ 2.02
TM2D3-209	ENST00000560013	GPR75-ASB3	A0A0A6YYF3	556 aa		27.67	■■■□□ 2.02
TM2D3-209	ENST00000560013	DTNB	O60941	627 aa		27.67	■■■□□ 2.02
TM2D3-209	ENST00000560013	ZBTB7A	O95365	584 aa		27.67	■■■□□ 2.02
TM2D3-209	ENST00000560013	PDIA4	P13667	645 aa	Known RBP	27.67	■■■□□ 2.02
TM2D3-209	ENST00000560013	FOXD4L5	Q5VV16	416 aa	Predicted RBP	27.67	■■■□□ 2.02
TM2D3-209	ENST00000560013	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	27.67	■■■□□ 2.02
TM2D3-209	ENST00000560013	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	27.67	■■■□□ 2.02
TM2D3-209	ENST00000560013	TOMM22	Q9NS69	142 aa		27.67	■■■□□ 2.02
TM2D3-209	ENST00000560013	SH2B2	O14492	632 aa	Predicted RBP	27.66	■■■□□ 2.02
TM2D3-209	ENST00000560013	SBK1	Q52WX2	424 aa		27.66	■■■□□ 2.02
TM2D3-209	ENST00000560013	RRP12	Q5JTH9	1297 aa	Known RBP	27.66	■■■□□ 2.02
TM2D3-209	ENST00000560013	STK11IP	Q8N1F8	1099 aa		27.66	■■■□□ 2.02
TM2D3-209	ENST00000560013	ARPP21	Q9UBL0	812 aa	Predicted RBP	27.66	■■■□□ 2.02
TM2D3-209	ENST00000560013	BRPF3	Q9ULD4	1205 aa		27.66	■■■□□ 2.02
TM2D3-209	ENST00000560013	KLF18	A0A0U1RQI7	1052 aa		27.66	■■■□□ 2.02
TM2D3-209	ENST00000560013	C21orf2	O43822	256 aa		27.66	■■■□□ 2.02
TM2D3-209	ENST00000560013	PC	P11498	1178 aa	Known RBP	27.66	■■■□□ 2.02
TM2D3-209	ENST00000560013	USP5	P45974	858 aa		27.66	■■■□□ 2.02
TM2D3-209	ENST00000560013	CCT2	P78371	535 aa	Known RBP	27.66	■■■□□ 2.02
TM2D3-209	ENST00000560013	GRIPAP1	Q4V328	841 aa		27.66	■■■□□ 2.02
TM2D3-209	ENST00000560013	IGDCC4	Q8TDY8	1250 aa		27.66	■■■□□ 2.02

Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms