RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 TBC1D8O95759 1140 aa15.43■□□□□ 0.06
CSPG4P12-202ENST00000559989 XRCC6P12956 609 aaKnown RBP eCLIP15.43■□□□□ 0.06
CSPG4P12-202ENST00000559989 MAN1A1P33908 653 aa15.43■□□□□ 0.06
CSPG4P12-202ENST00000559989 KRT15P19012 456 aa15.43■□□□□ 0.06
CSPG4P12-202ENST00000559989 NFE2L2Q16236 605 aa15.43■□□□□ 0.06
CSPG4P12-202ENST00000559989 PHBP35232 272 aa15.42■□□□□ 0.06
CSPG4P12-202ENST00000559989 STAG1Q8WVM7 1258 aa15.42■□□□□ 0.06
CSPG4P12-202ENST00000559989 RTL9Q8NET4 1388 aa15.42■□□□□ 0.06
CSPG4P12-202ENST00000559989 AKNAD1Q5T1N1 836 aa15.42■□□□□ 0.06
CSPG4P12-202ENST00000559989 LARP6Q9BRS8 491 aaKnown RBP15.42■□□□□ 0.06
CSPG4P12-202ENST00000559989 SPATS2LQ9NUQ6 558 aaKnown RBP15.42■□□□□ 0.06
CSPG4P12-202ENST00000559989 ESRRGP62508 458 aa15.42■□□□□ 0.06
CSPG4P12-202ENST00000559989 ARMC9Q7Z3E5 817 aa15.42■□□□□ 0.06
CSPG4P12-202ENST00000559989 SYCE1Q8N0S2 351 aa15.42■□□□□ 0.06
CSPG4P12-202ENST00000559989 NRBF2Q96F24 287 aa15.42■□□□□ 0.06
CSPG4P12-202ENST00000559989 RIPOR2Q9Y4F9 1068 aa15.42■□□□□ 0.06
CSPG4P12-202ENST00000559989 CALUO43852 315 aaPredicted RBP15.42■□□□□ 0.06
CSPG4P12-202ENST00000559989 RASIP1Q5U651 963 aa15.42■□□□□ 0.06
CSPG4P12-202ENST00000559989 MAIP1Q8WWC4 291 aa15.42■□□□□ 0.06
CSPG4P12-202ENST00000559989 RRP36Q96EU6 259 aaKnown RBP15.42■□□□□ 0.06
CSPG4P12-202ENST00000559989 HGSO14964 777 aaPredicted RBP15.42■□□□□ 0.06
CSPG4P12-202ENST00000559989 DNAJC25Q9H1X3 360 aa15.42■□□□□ 0.06
CSPG4P12-202ENST00000559989 CLSTN2Q9H4D0 955 aa15.42■□□□□ 0.06
CSPG4P12-202ENST00000559989 ESR2Q92731 530 aa15.41■□□□□ 0.06
CSPG4P12-202ENST00000559989 FAM8A1Q9UBU6 413 aa15.41■□□□□ 0.06
CSPG4P12-202ENST00000559989 PTPRCP08575 1304 aa15.41■□□□□ 0.06
CSPG4P12-202ENST00000559989 TRIM60Q495X7 471 aa15.41■□□□□ 0.06
CSPG4P12-202ENST00000559989 PROSER2Q86WR7 435 aaPredicted RBP15.41■□□□□ 0.06
CSPG4P12-202ENST00000559989 FAM71BQ8TC56 605 aa15.41■□□□□ 0.06
CSPG4P12-202ENST00000559989 ASIC3Q9UHC3 531 aa15.41■□□□□ 0.06
CSPG4P12-202ENST00000559989 SERPINB6P35237 376 aa15.41■□□□□ 0.06
CSPG4P12-202ENST00000559989 PAK2Q13177 524 aa15.41■□□□□ 0.06
CSPG4P12-202ENST00000559989 USP48Q86UV5 1035 aa15.41■□□□□ 0.06
CSPG4P12-202ENST00000559989 FNBP4Q8N3X1 1017 aaPredicted RBP15.41■□□□□ 0.06
CSPG4P12-202ENST00000559989 NOX5Q96PH1 765 aa15.41■□□□□ 0.06
CSPG4P12-202ENST00000559989 TRMT112Q9UI30 125 aaKnown RBP15.41■□□□□ 0.06
CSPG4P12-202ENST00000559989 CNPY2Q9Y2B0 182 aa15.41■□□□□ 0.06
CSPG4P12-202ENST00000559989 JADE1Q6IE81 842 aa15.41■□□□□ 0.06
CSPG4P12-202ENST00000559989 TMEM132EQ6IEE7 984 aa15.41■□□□□ 0.06
CSPG4P12-202ENST00000559989 CDAN1Q8IWY9 1227 aa15.41■□□□□ 0.06
CSPG4P12-202ENST00000559989 CEP19Q96LK0 163 aa15.41■□□□□ 0.06
CSPG4P12-202ENST00000559989 LMOD1P29536 600 aaPredicted RBP15.41■□□□□ 0.06
CSPG4P12-202ENST00000559989 TACO1Q9BSH4 297 aaKnown RBP15.41■□□□□ 0.06
CSPG4P12-202ENST00000559989 STX8Q9UNK0 236 aa15.41■□□□□ 0.06
CSPG4P12-202ENST00000559989 C6orf229H3BNL8 230 aa15.41■□□□□ 0.06
CSPG4P12-202ENST00000559989 PLS1Q14651 629 aa15.41■□□□□ 0.06
CSPG4P12-202ENST00000559989 DTHD1Q6ZMT9 781 aa15.41■□□□□ 0.06
CSPG4P12-202ENST00000559989 TYRO3Q06418 890 aa15.41■□□□□ 0.06
CSPG4P12-202ENST00000559989 TEKT2Q9UIF3 430 aa15.41■□□□□ 0.06
CSPG4P12-202ENST00000559989 TTF2Q9UNY4 1162 aaKnown RBP15.41■□□□□ 0.06
CSPG4P12-202ENST00000559989 SCINQ9Y6U3 715 aa15.41■□□□□ 0.06
CSPG4P12-202ENST00000559989 ATP6V1AP38606 617 aa15.4■□□□□ 0.06
CSPG4P12-202ENST00000559989 PRAM1Q96QH2 718 aa15.4■□□□□ 0.06
CSPG4P12-202ENST00000559989 ZBTB24O43167 697 aaPredicted RBP15.4■□□□□ 0.06
CSPG4P12-202ENST00000559989 GABPB1Q06547 395 aaPredicted RBP15.4■□□□□ 0.06
CSPG4P12-202ENST00000559989 ZBTB9Q96C00 473 aa15.4■□□□□ 0.06
CSPG4P12-202ENST00000559989 RAB17Q9H0T7 212 aa15.4■□□□□ 0.06
CSPG4P12-202ENST00000559989 EFCC1Q9HA90 598 aa15.4■□□□□ 0.06
CSPG4P12-202ENST00000559989 TSKSQ9UJT2 592 aa15.4■□□□□ 0.06
CSPG4P12-202ENST00000559989 ARHGAP5Q13017 1502 aa15.4■□□□□ 0.06
CSPG4P12-202ENST00000559989 RFX1P22670 979 aa15.4■□□□□ 0.06
CSPG4P12-202ENST00000559989 MMEL1Q495T6 779 aa15.4■□□□□ 0.06
CSPG4P12-202ENST00000559989 NACA2Q9H009 215 aa15.4■□□□□ 0.06
CSPG4P12-202ENST00000559989 IFNKQ9P0W0 207 aa15.4■□□□□ 0.06
CSPG4P12-202ENST00000559989 RPGRIP1Q96KN7 1286 aa15.4■□□□□ 0.06
CSPG4P12-202ENST00000559989 KLHL14Q9P2G3 628 aa15.4■□□□□ 0.06
CSPG4P12-202ENST00000559989 SMARCA2P51531 1590 aa15.4■□□□□ 0.06
CSPG4P12-202ENST00000559989 KLF18A0A0U1RQI7 1052 aa15.4■□□□□ 0.06
CSPG4P12-202ENST00000559989 NAP1L4Q99733 375 aaKnown RBP15.4■□□□□ 0.06
CSPG4P12-202ENST00000559989 PPFIA3O75145 1194 aa15.4■□□□□ 0.06
CSPG4P12-202ENST00000559989 PAWRQ96IZ0 340 aaKnown RBP15.4■□□□□ 0.06
CSPG4P12-202ENST00000559989 PFDN6O15212 129 aa15.39■□□□□ 0.05
CSPG4P12-202ENST00000559989 RABEP2Q9H5N1 569 aa15.39■□□□□ 0.05
CSPG4P12-202ENST00000559989 PPFIA4O75335 1185 aa15.39■□□□□ 0.05
CSPG4P12-202ENST00000559989 TRIM75PA6NK02 468 aa15.39■□□□□ 0.05
CSPG4P12-202ENST00000559989 PYGLP06737 847 aa15.39■□□□□ 0.05
CSPG4P12-202ENST00000559989 NUP58Q9BVL2 599 aa15.39■□□□□ 0.05
CSPG4P12-202ENST00000559989 MARCKSP29966 332 aaPredicted RBP15.39■□□□□ 0.05
CSPG4P12-202ENST00000559989 SMTNP53814 917 aa15.39■□□□□ 0.05
CSPG4P12-202ENST00000559989 KLHDC4Q8TBB5 520 aa15.39■□□□□ 0.05
CSPG4P12-202ENST00000559989 HAND2P61296 217 aa15.39■□□□□ 0.05
CSPG4P12-202ENST00000559989 ARHGEF9O43307 516 aa15.39■□□□□ 0.05
CSPG4P12-202ENST00000559989 SERPINI2O75830 405 aa15.39■□□□□ 0.05
CSPG4P12-202ENST00000559989 RTEL1-TNFRSF6BF6WH68 1400 aa15.38■□□□□ 0.05
CSPG4P12-202ENST00000559989 UQCRFS1P1P0C7P4 283 aa15.38■□□□□ 0.05
CSPG4P12-202ENST00000559989 DAAM1Q9Y4D1 1078 aa15.38■□□□□ 0.05
CSPG4P12-202ENST00000559989 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.38■□□□□ 0.05
CSPG4P12-202ENST00000559989 KRT12Q99456 494 aa15.38■□□□□ 0.05
CSPG4P12-202ENST00000559989 TMED1Q13445 227 aa15.38■□□□□ 0.05
CSPG4P12-202ENST00000559989 TMTC4Q5T4D3 741 aa15.38■□□□□ 0.05
CSPG4P12-202ENST00000559989 GSTA1P08263 222 aa15.38■□□□□ 0.05
CSPG4P12-202ENST00000559989 GSTA2P09210 222 aa15.38■□□□□ 0.05
CSPG4P12-202ENST00000559989 STX2P32856 288 aa15.38■□□□□ 0.05
CSPG4P12-202ENST00000559989 SNCBQ16143 134 aa15.38■□□□□ 0.05
CSPG4P12-202ENST00000559989 RSBN1LQ6PCB5 846 aaPredicted RBP15.38■□□□□ 0.05
CSPG4P12-202ENST00000559989 LMNB2Q03252 620 aa15.38■□□□□ 0.05
CSPG4P12-202ENST00000559989 LRRC23Q53EV4 343 aaPredicted RBP15.38■□□□□ 0.05
CSPG4P12-202ENST00000559989 EEF1DP29692 281 aaKnown RBP15.38■□□□□ 0.05
CSPG4P12-202ENST00000559989 ST5P78524 1137 aa15.38■□□□□ 0.05
CSPG4P12-202ENST00000559989 RIOK1Q9BRS2 568 aaKnown RBP15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms