RNA–Protein interactions for RNA: ENST00000559931.5

SMAD6-204, Transcript of SMAD family member 6, humanhuman

TSL 3

Gene SMAD6, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-204ENST00000559931 GPR75-ASB3A0A0A6YYF3 556 aa17.26■□□□□ 0.35
SMAD6-204ENST00000559931 SPDYE2BA6NHP3 402 aa17.26■□□□□ 0.35
SMAD6-204ENST00000559931 EGFRP00533 1210 aa17.26■□□□□ 0.35
SMAD6-204ENST00000559931 SPDYE6P0CI01 402 aa17.26■□□□□ 0.35
SMAD6-204ENST00000559931 PLCG2P16885 1265 aa17.26■□□□□ 0.35
SMAD6-204ENST00000559931 DYNLL1P63167 89 aaKnown RBP17.26■□□□□ 0.35
SMAD6-204ENST00000559931 NBPF9Q3BBW0 867 aa17.26■□□□□ 0.35
SMAD6-204ENST00000559931 ZMYM1Q5SVZ6 1142 aa17.26■□□□□ 0.35
SMAD6-204ENST00000559931 APOBEC3HQ6NTF7 200 aaKnown RBP17.26■□□□□ 0.35
SMAD6-204ENST00000559931 USP50Q70EL3 339 aaPredicted RBP17.26■□□□□ 0.35
SMAD6-204ENST00000559931 MTMR14Q8NCE2 650 aa17.26■□□□□ 0.35
SMAD6-204ENST00000559931 TRPM4Q8TD43 1214 aa17.26■□□□□ 0.35
SMAD6-204ENST00000559931 RUFY2Q8WXA3 655 aa17.26■□□□□ 0.35
SMAD6-204ENST00000559931 TAF1DQ9H5J8 278 aaPredicted RBP17.26■□□□□ 0.35
SMAD6-204ENST00000559931 TDRD3Q9H7E2 651 aaKnown RBP17.26■□□□□ 0.35
SMAD6-204ENST00000559931 GAKO14976 1311 aa17.25■□□□□ 0.35
SMAD6-204ENST00000559931 WNT10BO00744 389 aa17.25■□□□□ 0.35
SMAD6-204ENST00000559931 CDC45O75419 566 aa17.25■□□□□ 0.35
SMAD6-204ENST00000559931 CHMLP26374 656 aa17.25■□□□□ 0.35
SMAD6-204ENST00000559931 PNMA8AQ86V59 439 aaPredicted RBP17.25■□□□□ 0.35
SMAD6-204ENST00000559931 FAM227BQ96M60 508 aa17.25■□□□□ 0.35
SMAD6-204ENST00000559931 SEC62Q99442 399 aaKnown RBP17.25■□□□□ 0.35
SMAD6-204ENST00000559931 PUS7LQ9H0K6 701 aaKnown RBP17.25■□□□□ 0.35
SMAD6-204ENST00000559931 HELLSQ9NRZ9 838 aa17.25■□□□□ 0.35
SMAD6-204ENST00000559931 TMOD2Q9NZR1 351 aa17.25■□□□□ 0.35
SMAD6-204ENST00000559931 RFX7Q2KHR2 1363 aa17.25■□□□□ 0.35
SMAD6-204ENST00000559931 ADAMTSL1Q8N6G6 1762 aa17.25■□□□□ 0.35
SMAD6-204ENST00000559931 CLRN2A0PK11 232 aa17.24■□□□□ 0.35
SMAD6-204ENST00000559931 MBD4O95243 580 aa17.24■□□□□ 0.35
SMAD6-204ENST00000559931 PPP4CP60510 307 aa17.24■□□□□ 0.35
SMAD6-204ENST00000559931 MCMDC2Q4G0Z9 681 aa17.24■□□□□ 0.35
SMAD6-204ENST00000559931 CDC42EP5Q6NZY7 148 aa17.24■□□□□ 0.35
SMAD6-204ENST00000559931 CERS3Q8IU89 383 aa17.24■□□□□ 0.35
SMAD6-204ENST00000559931 OSBP2Q969R2 916 aa17.24■□□□□ 0.35
SMAD6-204ENST00000559931 ARMT1Q9H993 441 aa17.24■□□□□ 0.35
SMAD6-204ENST00000559931 VEZTQ9HBM0 779 aa17.24■□□□□ 0.35
SMAD6-204ENST00000559931 POLR2AP24928 1970 aaKnown RBP17.23■□□□□ 0.35
SMAD6-204ENST00000559931 A0A0D9SFI3 127 aa17.23■□□□□ 0.35
SMAD6-204ENST00000559931 M0R2C6 588 aa17.23■□□□□ 0.35
SMAD6-204ENST00000559931 HIRAP54198 1017 aaPredicted RBP17.23■□□□□ 0.35
SMAD6-204ENST00000559931 TEX11Q8IYF3 940 aa17.23■□□□□ 0.35
SMAD6-204ENST00000559931 SH3RF3Q8TEJ3 882 aaPredicted RBP17.23■□□□□ 0.35
SMAD6-204ENST00000559931 CRNKL1Q9BZJ0 848 aaKnown RBP17.23■□□□□ 0.35
SMAD6-204ENST00000559931 ZNF70Q9UC06 446 aaPredicted RBP17.23■□□□□ 0.35
SMAD6-204ENST00000559931 APPP05067 770 aa17.22■□□□□ 0.35
SMAD6-204ENST00000559931 POTEIP0CG38 1075 aa17.22■□□□□ 0.35
SMAD6-204ENST00000559931 POTEJP0CG39 1038 aa17.22■□□□□ 0.35
SMAD6-204ENST00000559931 USP5P45974 858 aa17.22■□□□□ 0.35
SMAD6-204ENST00000559931 CACNB3P54284 484 aa17.22■□□□□ 0.35
SMAD6-204ENST00000559931 MFAP1P55081 439 aaKnown RBP17.22■□□□□ 0.35
SMAD6-204ENST00000559931 CCDC129Q6ZRS4 1044 aa17.22■□□□□ 0.35
SMAD6-204ENST00000559931 LCORLQ8N3X6 602 aa17.22■□□□□ 0.35
SMAD6-204ENST00000559931 DCPSQ96C86 337 aaKnown RBP17.22■□□□□ 0.35
SMAD6-204ENST00000559931 ZBED3Q96IU2 234 aaPredicted RBP17.22■□□□□ 0.35
SMAD6-204ENST00000559931 TCP10L2B9ZVM9 353 aa17.21■□□□□ 0.35
SMAD6-204ENST00000559931 GPAA1O43292 621 aa17.21■□□□□ 0.35
SMAD6-204ENST00000559931 SPDYE2Q495Y8 402 aa17.21■□□□□ 0.35
SMAD6-204ENST00000559931 ANGEL2Q5VTE6 544 aaKnown RBP17.21■□□□□ 0.35
SMAD6-204ENST00000559931 STRBPQ96SI9 672 aaKnown RBP17.21■□□□□ 0.35
SMAD6-204ENST00000559931 RIOK1Q9BRS2 568 aaKnown RBP17.21■□□□□ 0.35
SMAD6-204ENST00000559931 SLC4A4Q9Y6R1 1079 aa17.21■□□□□ 0.35
SMAD6-204ENST00000559931 ASTN2O75129 1339 aaPredicted RBP17.21■□□□□ 0.34
SMAD6-204ENST00000559931 TOMM70O94826 608 aa17.2■□□□□ 0.34
SMAD6-204ENST00000559931 RHBDL3P58872 404 aa17.2■□□□□ 0.34
SMAD6-204ENST00000559931 PICALMQ13492 652 aa17.2■□□□□ 0.34
SMAD6-204ENST00000559931 KIAA1211Q6ZU35 1233 aa17.2■□□□□ 0.34
SMAD6-204ENST00000559931 TGFBRAP1Q8WUH2 860 aa17.2■□□□□ 0.34
SMAD6-204ENST00000559931 DDRGK1Q96HY6 314 aa17.2■□□□□ 0.34
SMAD6-204ENST00000559931 GGA3Q9NZ52 723 aa17.2■□□□□ 0.34
SMAD6-204ENST00000559931 PRKAB2O43741 272 aa17.19■□□□□ 0.34
SMAD6-204ENST00000559931 GNAT2P19087 354 aa17.19■□□□□ 0.34
SMAD6-204ENST00000559931 TNNI2P48788 182 aa17.19■□□□□ 0.34
SMAD6-204ENST00000559931 TCP10Q12799 353 aa17.19■□□□□ 0.34
SMAD6-204ENST00000559931 ZC3H15Q8WU90 426 aaKnown RBP17.19■□□□□ 0.34
SMAD6-204ENST00000559931 ECM29Q5VYK3 1845 aa17.19■□□□□ 0.34
SMAD6-204ENST00000559931 CCDC171Q6TFL3 1326 aa17.19■□□□□ 0.34
SMAD6-204ENST00000559931 TNFAIP1Q13829 316 aa17.18■□□□□ 0.34
SMAD6-204ENST00000559931 APOBEC3FQ8IUX4 373 aaKnown RBP17.18■□□□□ 0.34
SMAD6-204ENST00000559931 MAPKAPK5Q8IW41 473 aa17.18■□□□□ 0.34
SMAD6-204ENST00000559931 SULF1Q8IWU6 871 aa17.18■□□□□ 0.34
SMAD6-204ENST00000559931 RBM46Q8TBY0 533 aaKnown RBP17.18■□□□□ 0.34
SMAD6-204ENST00000559931 SDR42E1Q8WUS8 393 aa17.18■□□□□ 0.34
SMAD6-204ENST00000559931 ESYT1Q9BSJ8 1104 aa17.18■□□□□ 0.34
SMAD6-204ENST00000559931 SCAF8Q9UPN6 1271 aaKnown RBP17.18■□□□□ 0.34
SMAD6-204ENST00000559931 PATL2C9JE40 543 aaKnown RBP17.17■□□□□ 0.34
SMAD6-204ENST00000559931 SGSM2O43147 1006 aa17.17■□□□□ 0.34
SMAD6-204ENST00000559931 WDHD1O75717 1129 aaPredicted RBP17.17■□□□□ 0.34
SMAD6-204ENST00000559931 NFIAQ12857 509 aa17.17■□□□□ 0.34
SMAD6-204ENST00000559931 ZNF589Q86UQ0 364 aaPredicted RBP17.17■□□□□ 0.34
SMAD6-204ENST00000559931 LDHDQ86WU2 507 aa17.17■□□□□ 0.34
SMAD6-204ENST00000559931 ZSCAN29Q8IWY8 852 aaPredicted RBP17.17■□□□□ 0.34
SMAD6-204ENST00000559931 NACAP1Q9BZK3 213 aa17.17■□□□□ 0.34
SMAD6-204ENST00000559931 RAD50Q92878 1312 aa17.17■□□□□ 0.34
SMAD6-204ENST00000559931 FKBP1CQ5VVH2 108 aa17.16■□□□□ 0.34
SMAD6-204ENST00000559931 CHADLQ6NUI6 762 aa17.16■□□□□ 0.34
SMAD6-204ENST00000559931 KRT26Q7Z3Y9 468 aa17.16■□□□□ 0.34
SMAD6-204ENST00000559931 SMC1BQ8NDV3 1235 aa17.16■□□□□ 0.34
SMAD6-204ENST00000559931 IDI2Q9BXS1 227 aa17.16■□□□□ 0.34
SMAD6-204ENST00000559931 ATP8A2Q9NTI2 1148 aa17.16■□□□□ 0.34
SMAD6-204ENST00000559931 SAP30BPQ9UHR5 308 aaKnown RBP17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms