RNA–Protein interactions for RNA: ENST00000559774.6

LRRC28-215, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 624 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-215ENST00000559774 GPBP1L1Q9HC44 474 aaPredicted RBP10.46□□□□□ -0.73
LRRC28-215ENST00000559774 DIAPH3Q9NSV4 1193 aa10.46□□□□□ -0.73
LRRC28-215ENST00000559774 TMOD2Q9NZR1 351 aa10.46□□□□□ -0.73
LRRC28-215ENST00000559774 TAOK2Q9UL54 1235 aa10.46□□□□□ -0.73
LRRC28-215ENST00000559774 RAD50Q92878 1312 aa10.46□□□□□ -0.73
LRRC28-215ENST00000559774 RPAP1Q9BWH6 1393 aaPredicted RBP10.46□□□□□ -0.74
LRRC28-215ENST00000559774 SCN4AP35499 1836 aa10.46□□□□□ -0.74
LRRC28-215ENST00000559774 MYH13Q9UKX3 1938 aa10.45□□□□□ -0.74
LRRC28-215ENST00000559774 MAGEB6P1A0A0J9YX57 407 aa10.45□□□□□ -0.74
LRRC28-215ENST00000559774 CHMLP26374 656 aa10.45□□□□□ -0.74
LRRC28-215ENST00000559774 BTDP43251 543 aa10.45□□□□□ -0.74
LRRC28-215ENST00000559774 SPDYE2Q495Y8 402 aa10.45□□□□□ -0.74
LRRC28-215ENST00000559774 MCMDC2Q4G0Z9 681 aa10.45□□□□□ -0.74
LRRC28-215ENST00000559774 FAM83AQ86UY5 434 aa10.45□□□□□ -0.74
LRRC28-215ENST00000559774 LDHDQ86WU2 507 aa10.45□□□□□ -0.74
LRRC28-215ENST00000559774 AIDAQ96BJ3 306 aa10.45□□□□□ -0.74
LRRC28-215ENST00000559774 RIOK1Q9BRS2 568 aaKnown RBP10.45□□□□□ -0.74
LRRC28-215ENST00000559774 PPP2R3BQ9Y5P8 575 aa10.45□□□□□ -0.74
LRRC28-215ENST00000559774 DOCK2Q92608 1830 aa10.44□□□□□ -0.74
LRRC28-215ENST00000559774 ENTPD3O75355 529 aa10.44□□□□□ -0.74
LRRC28-215ENST00000559774 CDC45O75419 566 aa10.44□□□□□ -0.74
LRRC28-215ENST00000559774 TNNI2P48788 182 aa10.44□□□□□ -0.74
LRRC28-215ENST00000559774 HIRAP54198 1017 aaPredicted RBP10.44□□□□□ -0.74
LRRC28-215ENST00000559774 RHBDL3P58872 404 aa10.44□□□□□ -0.74
LRRC28-215ENST00000559774 NBPF9Q3BBW0 867 aa10.44□□□□□ -0.74
LRRC28-215ENST00000559774 TBC1D10BQ4KMP7 808 aaPredicted RBP10.44□□□□□ -0.74
LRRC28-215ENST00000559774 CDC42EP5Q6NZY7 148 aa10.44□□□□□ -0.74
LRRC28-215ENST00000559774 GIMAP6Q6P9H5 292 aa10.44□□□□□ -0.74
LRRC28-215ENST00000559774 ADGRA1Q86SQ6 560 aa10.44□□□□□ -0.74
LRRC28-215ENST00000559774 APOBEC3FQ8IUX4 373 aaKnown RBP10.44□□□□□ -0.74
LRRC28-215ENST00000559774 TRPM4Q8TD43 1214 aa10.44□□□□□ -0.74
LRRC28-215ENST00000559774 OSBP2Q969R2 916 aa10.44□□□□□ -0.74
LRRC28-215ENST00000559774 CRNKL1Q9BZJ0 848 aaKnown RBP10.44□□□□□ -0.74
LRRC28-215ENST00000559774 PUS7LQ9H0K6 701 aaKnown RBP10.44□□□□□ -0.74
LRRC28-215ENST00000559774 ATP8A2Q9NTI2 1148 aa10.44□□□□□ -0.74
LRRC28-215ENST00000559774 USP40Q9NVE5 1235 aa10.44□□□□□ -0.74
LRRC28-215ENST00000559774 AATFQ9NY61 560 aaKnown RBP eCLIP10.44□□□□□ -0.74
LRRC28-215ENST00000559774 ZNF70Q9UC06 446 aaPredicted RBP10.44□□□□□ -0.74
LRRC28-215ENST00000559774 SHTN1A0MZ66 631 aa10.43□□□□□ -0.74
LRRC28-215ENST00000559774 EPB41L2O43491 1005 aaKnown RBP10.43□□□□□ -0.74
LRRC28-215ENST00000559774 EGFRP00533 1210 aa10.43□□□□□ -0.74
LRRC28-215ENST00000559774 RBM26Q5T8P6 1007 aaKnown RBP10.43□□□□□ -0.74
LRRC28-215ENST00000559774 SKAP1Q86WV1 359 aa10.43□□□□□ -0.74
LRRC28-215ENST00000559774 DCPSQ96C86 337 aaKnown RBP10.43□□□□□ -0.74
LRRC28-215ENST00000559774 STRBPQ96SI9 672 aaKnown RBP10.43□□□□□ -0.74
LRRC28-215ENST00000559774 TDRD3Q9H7E2 651 aaKnown RBP10.43□□□□□ -0.74
LRRC28-215ENST00000559774 NMRK2Q9NPI5 230 aa10.43□□□□□ -0.74
LRRC28-215ENST00000559774 MAST2Q6P0Q8 1798 aa10.43□□□□□ -0.74
LRRC28-215ENST00000559774 PATL2C9JE40 543 aaKnown RBP10.42□□□□□ -0.74
LRRC28-215ENST00000559774 SGSM2O43147 1006 aa10.42□□□□□ -0.74
LRRC28-215ENST00000559774 GPAA1O43292 621 aa10.42□□□□□ -0.74
LRRC28-215ENST00000559774 WDHD1O75717 1129 aaPredicted RBP10.42□□□□□ -0.74
LRRC28-215ENST00000559774 MBD4O95243 580 aa10.42□□□□□ -0.74
LRRC28-215ENST00000559774 NMIQ13287 307 aaPredicted RBP10.42□□□□□ -0.74
LRRC28-215ENST00000559774 CWC27Q6UX04 472 aaKnown RBP10.42□□□□□ -0.74
LRRC28-215ENST00000559774 CDC37L1Q7L3B6 337 aa10.42□□□□□ -0.74
LRRC28-215ENST00000559774 SULF1Q8IWU6 871 aa10.42□□□□□ -0.74
LRRC28-215ENST00000559774 TEX11Q8IYF3 940 aa10.42□□□□□ -0.74
LRRC28-215ENST00000559774 MIGA1Q8NAN2 632 aa10.42□□□□□ -0.74
LRRC28-215ENST00000559774 ZNF784Q8NCA9 323 aaPredicted RBP10.42□□□□□ -0.74
LRRC28-215ENST00000559774 FAM151AQ8WW52 585 aa10.42□□□□□ -0.74
LRRC28-215ENST00000559774 HOOK2Q96ED9 719 aa10.42□□□□□ -0.74
LRRC28-215ENST00000559774 DDRGK1Q96HY6 314 aa10.42□□□□□ -0.74
LRRC28-215ENST00000559774 FAM227BQ96M60 508 aa10.42□□□□□ -0.74
LRRC28-215ENST00000559774 DHX36Q9H2U1 1008 aaKnown RBP10.42□□□□□ -0.74
LRRC28-215ENST00000559774 COL2A1P02458 1487 aaPredicted RBP10.42□□□□□ -0.74
LRRC28-215ENST00000559774 ZMYM6O95789 1325 aa10.41□□□□□ -0.74
LRRC28-215ENST00000559774 CCDC171Q6TFL3 1326 aa10.41□□□□□ -0.74
LRRC28-215ENST00000559774 A0A0D9SFI3 127 aa10.41□□□□□ -0.74
LRRC28-215ENST00000559774 KIF3CO14782 793 aa10.41□□□□□ -0.74
LRRC28-215ENST00000559774 TOMM70O94826 608 aa10.41□□□□□ -0.74
LRRC28-215ENST00000559774 ALX1Q15699 326 aa10.41□□□□□ -0.74
LRRC28-215ENST00000559774 EAPPQ56P03 285 aaPredicted RBP10.41□□□□□ -0.74
LRRC28-215ENST00000559774 ANGEL2Q5VTE6 544 aaKnown RBP10.41□□□□□ -0.74
LRRC28-215ENST00000559774 CHADLQ6NUI6 762 aa10.41□□□□□ -0.74
LRRC28-215ENST00000559774 RBM46Q8TBY0 533 aaKnown RBP10.41□□□□□ -0.74
LRRC28-215ENST00000559774 SH3RF3Q8TEJ3 882 aaPredicted RBP10.41□□□□□ -0.74
LRRC28-215ENST00000559774 DSCC1Q9BVC3 393 aa10.41□□□□□ -0.74
LRRC28-215ENST00000559774 NACAP1Q9BZK3 213 aa10.41□□□□□ -0.74
LRRC28-215ENST00000559774 ARMT1Q9H993 441 aa10.41□□□□□ -0.74
LRRC28-215ENST00000559774 GGA3Q9NZ52 723 aa10.41□□□□□ -0.74
LRRC28-215ENST00000559774 MKRN1Q9UHC7 482 aaKnown RBP10.41□□□□□ -0.74
LRRC28-215ENST00000559774 PCDHAC2Q9Y5I4 1007 aa10.41□□□□□ -0.74
LRRC28-215ENST00000559774 ATRNL1Q5VV63 1379 aa10.4□□□□□ -0.74
LRRC28-215ENST00000559774 M0R2C6 588 aa10.4□□□□□ -0.74
LRRC28-215ENST00000559774 USP5P45974 858 aa10.4□□□□□ -0.74
LRRC28-215ENST00000559774 DYNLL1P63167 89 aaKnown RBP10.4□□□□□ -0.74
LRRC28-215ENST00000559774 KRT26Q7Z3Y9 468 aa10.4□□□□□ -0.74
LRRC28-215ENST00000559774 AMOTL1Q8IY63 956 aa10.4□□□□□ -0.74
LRRC28-215ENST00000559774 LCORLQ8N3X6 602 aa10.4□□□□□ -0.74
LRRC28-215ENST00000559774 ZNF526Q8TF50 670 aaPredicted RBP10.4□□□□□ -0.74
LRRC28-215ENST00000559774 ESYT1Q9BSJ8 1104 aa10.4□□□□□ -0.74
LRRC28-215ENST00000559774 DEFB129Q9H1M3 183 aa10.4□□□□□ -0.74
LRRC28-215ENST00000559774 VEZTQ9HBM0 779 aa10.4□□□□□ -0.74
LRRC28-215ENST00000559774 DCP1AQ9NPI6 582 aaPredicted RBP10.4□□□□□ -0.74
LRRC28-215ENST00000559774 FAM198AQ9UFP1 575 aa10.4□□□□□ -0.74
LRRC28-215ENST00000559774 CLEC11AQ9Y240 323 aa10.4□□□□□ -0.74
LRRC28-215ENST00000559774 SLC4A4Q9Y6R1 1079 aa10.4□□□□□ -0.74
LRRC28-215ENST00000559774 FLT1P17948 1338 aa10.39□□□□□ -0.75
LRRC28-215ENST00000559774 CLRN2A0PK11 232 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms