RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 CARMIL3Q8ND23 1372 aa12.3□□□□□ -0.44
CARMIL3-202ENST00000559694 MYCNP04198 464 aaPredicted RBP12.3□□□□□ -0.44
CARMIL3-202ENST00000559694 GPR108Q9NPR9 543 aa12.3□□□□□ -0.44
CARMIL3-202ENST00000559694 SHPRHQ149N8 1683 aa12.3□□□□□ -0.44
CARMIL3-202ENST00000559694 CC2D2BQ6DHV5 1058 aa12.3□□□□□ -0.44
CARMIL3-202ENST00000559694 OLFM4Q6UX06 510 aa12.3□□□□□ -0.44
CARMIL3-202ENST00000559694 CCDC12Q8WUD4 166 aaPredicted RBP12.3□□□□□ -0.44
CARMIL3-202ENST00000559694 TRMT1LQ7Z2T5 733 aaKnown RBP12.29□□□□□ -0.44
CARMIL3-202ENST00000559694 CEMIPQ8WUJ3 1361 aa12.29□□□□□ -0.44
CARMIL3-202ENST00000559694 ADGRB2O60241 1585 aa12.29□□□□□ -0.44
CARMIL3-202ENST00000559694 CAMTA2O94983 1202 aa12.29□□□□□ -0.44
CARMIL3-202ENST00000559694 SDR42E1Q8WUS8 393 aa12.29□□□□□ -0.44
CARMIL3-202ENST00000559694 SPON1Q9HCB6 807 aa12.29□□□□□ -0.44
CARMIL3-202ENST00000559694 ZYXQ15942 572 aaKnown RBP12.29□□□□□ -0.44
CARMIL3-202ENST00000559694 CERS3Q8IU89 383 aa12.29□□□□□ -0.44
CARMIL3-202ENST00000559694 ADCY9O60503 1353 aa12.28□□□□□ -0.44
CARMIL3-202ENST00000559694 GSPT1P15170 499 aaKnown RBP12.28□□□□□ -0.44
CARMIL3-202ENST00000559694 AK2P54819 239 aa12.28□□□□□ -0.44
CARMIL3-202ENST00000559694 CTDSPL2Q05D32 466 aa12.28□□□□□ -0.44
CARMIL3-202ENST00000559694 MAPK8IP2Q13387 824 aaPredicted RBP12.28□□□□□ -0.44
CARMIL3-202ENST00000559694 ANTXR1Q9H6X2 564 aa12.28□□□□□ -0.44
CARMIL3-202ENST00000559694 MINPP1Q9UNW1 487 aa12.28□□□□□ -0.44
CARMIL3-202ENST00000559694 A0A0D9SFI3 127 aa12.28□□□□□ -0.44
CARMIL3-202ENST00000559694 CHRNA5P30532 468 aa12.28□□□□□ -0.44
CARMIL3-202ENST00000559694 BRIP1Q9BX63 1249 aa12.28□□□□□ -0.44
CARMIL3-202ENST00000559694 ZKSCAN5Q9Y2L8 839 aa12.28□□□□□ -0.44
CARMIL3-202ENST00000559694 TCP10L2B9ZVM9 353 aa12.28□□□□□ -0.44
CARMIL3-202ENST00000559694 SLC27A2O14975 620 aa12.28□□□□□ -0.44
CARMIL3-202ENST00000559694 DHX8Q14562 1220 aaKnown RBP12.28□□□□□ -0.44
CARMIL3-202ENST00000559694 PLS1Q14651 629 aa12.28□□□□□ -0.44
CARMIL3-202ENST00000559694 HEATR3Q7Z4Q2 680 aa12.28□□□□□ -0.44
CARMIL3-202ENST00000559694 ALG1Q9BT22 464 aa12.28□□□□□ -0.44
CARMIL3-202ENST00000559694 SPDYE4A6NLX3 237 aa12.28□□□□□ -0.44
CARMIL3-202ENST00000559694 TPM1P09493 284 aa12.28□□□□□ -0.44
CARMIL3-202ENST00000559694 TNIP1Q15025 636 aa12.28□□□□□ -0.44
CARMIL3-202ENST00000559694 SLC15A2Q16348 729 aa12.28□□□□□ -0.44
CARMIL3-202ENST00000559694 PICK1Q9NRD5 415 aa12.28□□□□□ -0.44
CARMIL3-202ENST00000559694 BMP2KQ9NSY1 1161 aaPredicted RBP12.28□□□□□ -0.44
CARMIL3-202ENST00000559694 CEP131Q9UPN4 1083 aa12.28□□□□□ -0.44
CARMIL3-202ENST00000559694 STX6O43752 255 aa12.27□□□□□ -0.44
CARMIL3-202ENST00000559694 RTKN2Q8IZC4 609 aa12.27□□□□□ -0.44
CARMIL3-202ENST00000559694 SNX21Q969T3 373 aa12.27□□□□□ -0.44
CARMIL3-202ENST00000559694 GDPD2Q9HCC8 539 aa12.27□□□□□ -0.44
CARMIL3-202ENST00000559694 COL5A2P05997 1499 aaPredicted RBP12.27□□□□□ -0.45
CARMIL3-202ENST00000559694 POLA2Q14181 598 aa12.27□□□□□ -0.45
CARMIL3-202ENST00000559694 KNDC1Q76NI1 1749 aa12.27□□□□□ -0.45
CARMIL3-202ENST00000559694 BTDP43251 543 aa12.27□□□□□ -0.45
CARMIL3-202ENST00000559694 CLRN2A0PK11 232 aa12.26□□□□□ -0.45
CARMIL3-202ENST00000559694 PATL2C9JE40 543 aaKnown RBP12.26□□□□□ -0.45
CARMIL3-202ENST00000559694 PRR5LQ6MZQ0 368 aa12.26□□□□□ -0.45
CARMIL3-202ENST00000559694 RUFY3Q7L099 469 aa12.26□□□□□ -0.45
CARMIL3-202ENST00000559694 A0A0G2JLW4 131 aa12.26□□□□□ -0.45
CARMIL3-202ENST00000559694 ZNF526Q8TF50 670 aaPredicted RBP12.26□□□□□ -0.45
CARMIL3-202ENST00000559694 TAOK3Q9H2K8 898 aa12.26□□□□□ -0.45
CARMIL3-202ENST00000559694 CGNQ9P2M7 1197 aaKnown RBP12.26□□□□□ -0.45
CARMIL3-202ENST00000559694 ERICH4A6NGS2 130 aa12.26□□□□□ -0.45
CARMIL3-202ENST00000559694 TNFAIP1Q13829 316 aa12.26□□□□□ -0.45
CARMIL3-202ENST00000559694 ZNF34Q8IZ26 560 aa12.26□□□□□ -0.45
CARMIL3-202ENST00000559694 CDHR2Q9BYE9 1310 aa12.26□□□□□ -0.45
CARMIL3-202ENST00000559694 CALM1P0DP23 149 aa12.25□□□□□ -0.45
CARMIL3-202ENST00000559694 CALM2P0DP24 149 aa12.25□□□□□ -0.45
CARMIL3-202ENST00000559694 CALM3P0DP25 149 aa12.25□□□□□ -0.45
CARMIL3-202ENST00000559694 TFAP4Q01664 338 aa12.25□□□□□ -0.45
CARMIL3-202ENST00000559694 PDIA6Q15084 440 aa12.25□□□□□ -0.45
CARMIL3-202ENST00000559694 NAT10Q9H0A0 1025 aaKnown RBP12.25□□□□□ -0.45
CARMIL3-202ENST00000559694 TNMDQ9H2S6 317 aa12.25□□□□□ -0.45
CARMIL3-202ENST00000559694 GPCPD1Q9NPB8 672 aa12.25□□□□□ -0.45
CARMIL3-202ENST00000559694 STAP2Q9UGK3 403 aa12.25□□□□□ -0.45
CARMIL3-202ENST00000559694 INTS5Q6P9B9 1019 aaKnown RBP12.25□□□□□ -0.45
CARMIL3-202ENST00000559694 LRSAM1Q6UWE0 723 aa12.25□□□□□ -0.45
CARMIL3-202ENST00000559694 ZNF830Q96NB3 372 aaPredicted RBP12.25□□□□□ -0.45
CARMIL3-202ENST00000559694 SCAND2PQ9GZW5 306 aaPredicted RBP12.25□□□□□ -0.45
CARMIL3-202ENST00000559694 SEMA3EO15041 775 aa12.25□□□□□ -0.45
CARMIL3-202ENST00000559694 NAPAP54920 295 aa12.25□□□□□ -0.45
CARMIL3-202ENST00000559694 RBM25P49756 843 aaKnown RBP12.25□□□□□ -0.45
CARMIL3-202ENST00000559694 TRAF1Q13077 416 aa12.25□□□□□ -0.45
CARMIL3-202ENST00000559694 MTX1Q13505 466 aa12.25□□□□□ -0.45
CARMIL3-202ENST00000559694 RASGRF1Q13972 1273 aa12.25□□□□□ -0.45
CARMIL3-202ENST00000559694 FAM47AQ5JRC9 791 aa12.25□□□□□ -0.45
CARMIL3-202ENST00000559694 IFNL3Q8IZI9 196 aa12.25□□□□□ -0.45
CARMIL3-202ENST00000559694 DIXDC1Q155Q3 683 aa12.24□□□□□ -0.45
CARMIL3-202ENST00000559694 SULF1Q8IWU6 871 aa12.24□□□□□ -0.45
CARMIL3-202ENST00000559694 PRIMPOLQ96LW4 560 aa12.24□□□□□ -0.45
CARMIL3-202ENST00000559694 SNX14Q9Y5W7 946 aa12.24□□□□□ -0.45
CARMIL3-202ENST00000559694 CNTNAP4Q9C0A0 1308 aa12.24□□□□□ -0.45
CARMIL3-202ENST00000559694 ADCY5O95622 1261 aa12.24□□□□□ -0.45
CARMIL3-202ENST00000559694 UBE3CQ15386 1083 aa12.24□□□□□ -0.45
CARMIL3-202ENST00000559694 TAF3Q5VWG9 929 aa12.24□□□□□ -0.45
CARMIL3-202ENST00000559694 EHMT1Q9H9B1 1298 aa12.24□□□□□ -0.45
CARMIL3-202ENST00000559694 FGAP02671 866 aa12.24□□□□□ -0.45
CARMIL3-202ENST00000559694 HSPD1P10809 573 aaKnown RBP12.24□□□□□ -0.45
CARMIL3-202ENST00000559694 PTH1RQ03431 593 aa12.24□□□□□ -0.45
CARMIL3-202ENST00000559694 SH2D4AQ9H788 454 aa12.24□□□□□ -0.45
CARMIL3-202ENST00000559694 FOXO4P98177 505 aa12.23□□□□□ -0.45
CARMIL3-202ENST00000559694 HS1BP3Q53T59 392 aa12.23□□□□□ -0.45
CARMIL3-202ENST00000559694 AKNAD1Q5T1N1 836 aa12.23□□□□□ -0.45
CARMIL3-202ENST00000559694 CCDC183Q5T5S1 534 aa12.23□□□□□ -0.45
CARMIL3-202ENST00000559694 CIAPIN1Q6FI81 312 aa12.23□□□□□ -0.45
CARMIL3-202ENST00000559694 HOOK2Q96ED9 719 aa12.23□□□□□ -0.45
CARMIL3-202ENST00000559694 COA1Q9GZY4 146 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms