RNA–Protein interactions for RNA: ENST00000559175.1

CTDSPL2-206, Transcript of CTD small phosphatase like 2, humanhuman

TSL 2

Gene CTDSPL2, Length 3,609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-206ENST00000559175 ZNF853P0CG23 659 aa6.82□□□□□ -1.32
CTDSPL2-206ENST00000559175 VARSP26640 1264 aaKnown RBP6.82□□□□□ -1.32
CTDSPL2-206ENST00000559175 SLC4A3P48751 1232 aa6.82□□□□□ -1.32
CTDSPL2-206ENST00000559175 GUCA2AQ02747 115 aa6.82□□□□□ -1.32
CTDSPL2-206ENST00000559175 EHHADHQ08426 723 aa6.82□□□□□ -1.32
CTDSPL2-206ENST00000559175 OCLNQ16625 522 aa6.82□□□□□ -1.32
CTDSPL2-206ENST00000559175 UBE2Q1Q7Z7E8 422 aa6.82□□□□□ -1.32
CTDSPL2-206ENST00000559175 DGKHQ86XP1 1220 aa6.82□□□□□ -1.32
CTDSPL2-206ENST00000559175 ARL10Q8N8L6 244 aa6.82□□□□□ -1.32
CTDSPL2-206ENST00000559175 JARID2Q92833 1246 aaPredicted RBP6.82□□□□□ -1.32
CTDSPL2-206ENST00000559175 HLA-CQ95604 372 aa6.82□□□□□ -1.32
CTDSPL2-206ENST00000559175 MORC2Q9Y6X9 1032 aaPredicted RBP6.82□□□□□ -1.32
CTDSPL2-206ENST00000559175 SMTNL1A8MU46 457 aa6.82□□□□□ -1.32
CTDSPL2-206ENST00000559175 ELL2O00472 640 aaPredicted RBP6.82□□□□□ -1.32
CTDSPL2-206ENST00000559175 DIAPH1O60610 1272 aaKnown RBP6.82□□□□□ -1.32
CTDSPL2-206ENST00000559175 RPN1P04843 607 aaKnown RBP6.82□□□□□ -1.32
CTDSPL2-206ENST00000559175 TCIRG1Q13488 830 aa6.82□□□□□ -1.32
CTDSPL2-206ENST00000559175 SQSTM1Q13501 440 aa6.82□□□□□ -1.32
CTDSPL2-206ENST00000559175 TBC1D10BQ4KMP7 808 aaPredicted RBP6.82□□□□□ -1.32
CTDSPL2-206ENST00000559175 LCA5Q86VQ0 697 aa6.82□□□□□ -1.32
CTDSPL2-206ENST00000559175 IPCEF1Q8WWN9 437 aaPredicted RBP6.82□□□□□ -1.32
CTDSPL2-206ENST00000559175 TRIM52Q96A61 297 aa6.82□□□□□ -1.32
CTDSPL2-206ENST00000559175 CCDC8Q9H0W5 538 aaPredicted RBP6.82□□□□□ -1.32
CTDSPL2-206ENST00000559175 FAM208AQ9UK61 1670 aaKnown RBP6.81□□□□□ -1.32
CTDSPL2-206ENST00000559175 KCNA2P16389 499 aa6.81□□□□□ -1.32
CTDSPL2-206ENST00000559175 EPHB1P54762 984 aa6.81□□□□□ -1.32
CTDSPL2-206ENST00000559175 EIF4G2P78344 907 aaKnown RBP eCLIP6.81□□□□□ -1.32
CTDSPL2-206ENST00000559175 LMNTD2Q8IXW0 634 aa6.81□□□□□ -1.32
CTDSPL2-206ENST00000559175 SNX21Q969T3 373 aa6.81□□□□□ -1.32
CTDSPL2-206ENST00000559175 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.81□□□□□ -1.32
CTDSPL2-206ENST00000559175 EGFL7Q9UHF1 273 aa6.81□□□□□ -1.32
CTDSPL2-206ENST00000559175 KIF20BQ96Q89 1820 aa6.81□□□□□ -1.32
CTDSPL2-206ENST00000559175 IRS4O14654 1257 aaPredicted RBP6.81□□□□□ -1.32
CTDSPL2-206ENST00000559175 PGRP06401 933 aa6.81□□□□□ -1.32
CTDSPL2-206ENST00000559175 TPM3P06753 285 aa6.81□□□□□ -1.32
CTDSPL2-206ENST00000559175 SOX11P35716 441 aa6.81□□□□□ -1.32
CTDSPL2-206ENST00000559175 ST13P50502 369 aaKnown RBP6.81□□□□□ -1.32
CTDSPL2-206ENST00000559175 CLDN10P78369 228 aa6.81□□□□□ -1.32
CTDSPL2-206ENST00000559175 PPP2R5CQ13362 524 aa6.81□□□□□ -1.32
CTDSPL2-206ENST00000559175 KRT77Q7Z794 578 aa6.81□□□□□ -1.32
CTDSPL2-206ENST00000559175 ZNF713Q8N859 430 aaPredicted RBP6.81□□□□□ -1.32
CTDSPL2-206ENST00000559175 CDHR1Q96JP9 859 aa6.81□□□□□ -1.32
CTDSPL2-206ENST00000559175 FAM210AQ96ND0 272 aa6.81□□□□□ -1.32
CTDSPL2-206ENST00000559175 ATG3Q9NT62 314 aa6.81□□□□□ -1.32
CTDSPL2-206ENST00000559175 ABCF2Q9UG63 623 aa6.81□□□□□ -1.32
CTDSPL2-206ENST00000559175 KIAA1024Q9UPX6 916 aa6.81□□□□□ -1.32
CTDSPL2-206ENST00000559175 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.81□□□□□ -1.32
CTDSPL2-206ENST00000559175 VSTM5A8MXK1 200 aa6.81□□□□□ -1.32
CTDSPL2-206ENST00000559175 POU3F3P20264 500 aaPredicted RBP6.81□□□□□ -1.32
CTDSPL2-206ENST00000559175 C16orf54Q6UWD8 224 aa6.81□□□□□ -1.32
CTDSPL2-206ENST00000559175 WAPLQ7Z5K2 1190 aa6.81□□□□□ -1.32
CTDSPL2-206ENST00000559175 IFNL1Q8IU54 200 aa6.81□□□□□ -1.32
CTDSPL2-206ENST00000559175 ANAPC16Q96DE5 110 aa6.81□□□□□ -1.32
CTDSPL2-206ENST00000559175 MTMR8Q96EF0 704 aa6.81□□□□□ -1.32
CTDSPL2-206ENST00000559175 BORCS6Q96GS4 357 aa6.81□□□□□ -1.32
CTDSPL2-206ENST00000559175 GTPBP4Q9BZE4 634 aaKnown RBP6.81□□□□□ -1.32
CTDSPL2-206ENST00000559175 NGRNQ9NPE2 291 aaKnown RBP6.81□□□□□ -1.32
CTDSPL2-206ENST00000559175 CXXC1Q9P0U4 656 aaPredicted RBP6.81□□□□□ -1.32
CTDSPL2-206ENST00000559175 GTF2A1LQ9UNN4 478 aa6.81□□□□□ -1.32
CTDSPL2-206ENST00000559175 N4BP2Q86UW6 1770 aaPredicted RBP6.8□□□□□ -1.32
CTDSPL2-206ENST00000559175 hCG_1642624A0A1W2PR95 340 aa6.8□□□□□ -1.32
CTDSPL2-206ENST00000559175 A6NJY4 79 aa6.8□□□□□ -1.32
CTDSPL2-206ENST00000559175 SOCS7O14512 581 aa6.8□□□□□ -1.32
CTDSPL2-206ENST00000559175 PAX7P23759 505 aa6.8□□□□□ -1.32
CTDSPL2-206ENST00000559175 DNAJB2P25686 324 aa6.8□□□□□ -1.32
CTDSPL2-206ENST00000559175 SERPINB3P29508 390 aa6.8□□□□□ -1.32
CTDSPL2-206ENST00000559175 CASP2P42575 452 aa6.8□□□□□ -1.32
CTDSPL2-206ENST00000559175 PSMC1P62191 440 aaKnown RBP6.8□□□□□ -1.32
CTDSPL2-206ENST00000559175 MORC1Q86VD1 984 aa6.8□□□□□ -1.32
CTDSPL2-206ENST00000559175 RMI1Q9H9A7 625 aa6.8□□□□□ -1.32
CTDSPL2-206ENST00000559175 PCDHGB3Q9Y5G1 929 aa6.8□□□□□ -1.32
CTDSPL2-206ENST00000559175 PTCH1Q13635 1447 aa6.8□□□□□ -1.32
CTDSPL2-206ENST00000559175 PIK3CAP42336 1068 aa6.8□□□□□ -1.32
CTDSPL2-206ENST00000559175 C16orf87Q6PH81 154 aa6.8□□□□□ -1.32
CTDSPL2-206ENST00000559175 ZNF354CQ86Y25 554 aa6.8□□□□□ -1.32
CTDSPL2-206ENST00000559175 KIF12Q96FN5 646 aa6.8□□□□□ -1.32
CTDSPL2-206ENST00000559175 PCDH10Q9P2E7 1040 aa6.8□□□□□ -1.32
CTDSPL2-206ENST00000559175 IPPQ9Y573 584 aa6.8□□□□□ -1.32
CTDSPL2-206ENST00000559175 PIK3C2GO75747 1445 aa6.8□□□□□ -1.32
CTDSPL2-206ENST00000559175 IPO7O95373 1038 aaKnown RBP6.8□□□□□ -1.32
CTDSPL2-206ENST00000559175 MYCLP1P12525 358 aaPredicted RBP6.8□□□□□ -1.32
CTDSPL2-206ENST00000559175 CASQ1P31415 396 aa6.8□□□□□ -1.32
CTDSPL2-206ENST00000559175 CTHP32929 405 aa6.8□□□□□ -1.32
CTDSPL2-206ENST00000559175 FMR1Q06787 632 aaKnown RBP eCLIP6.8□□□□□ -1.32
CTDSPL2-206ENST00000559175 ZC3H12AQ5D1E8 599 aaKnown RBP6.8□□□□□ -1.32
CTDSPL2-206ENST00000559175 PLPP6Q8IY26 295 aa6.8□□□□□ -1.32
CTDSPL2-206ENST00000559175 TBC1D20Q96BZ9 403 aa6.8□□□□□ -1.32
CTDSPL2-206ENST00000559175 GPRASP2Q96D09 838 aa6.8□□□□□ -1.32
CTDSPL2-206ENST00000559175 NUCKS1Q9H1E3 243 aaKnown RBP6.8□□□□□ -1.32
CTDSPL2-206ENST00000559175 CCDC87Q9NVE4 849 aa6.8□□□□□ -1.32
CTDSPL2-206ENST00000559175 F2P00734 622 aa6.79□□□□□ -1.32
CTDSPL2-206ENST00000559175 GLULP15104 373 aa6.79□□□□□ -1.32
CTDSPL2-206ENST00000559175 NASPP49321 788 aaPredicted RBP6.79□□□□□ -1.32
CTDSPL2-206ENST00000559175 NFKB2Q00653 900 aa6.79□□□□□ -1.32
CTDSPL2-206ENST00000559175 HOMER1Q86YM7 354 aa6.79□□□□□ -1.32
CTDSPL2-206ENST00000559175 PAWRQ96IZ0 340 aaKnown RBP6.79□□□□□ -1.32
CTDSPL2-206ENST00000559175 RBSNQ9H1K0 784 aa6.79□□□□□ -1.32
CTDSPL2-206ENST00000559175 V9GY48 417 aaPredicted RBP6.79□□□□□ -1.32
CTDSPL2-206ENST00000559175 MPSTP25325 297 aa6.79□□□□□ -1.32
CTDSPL2-206ENST00000559175 IRX5P78411 483 aaPredicted RBP6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms