RNA–Protein interactions for RNA: ENST00000559043.1

CDC42BPB-204, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 5

Gene CDC42BPB, Length 1,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-204ENST00000559043 MRIQ9BWK5 157 aa18.93■□□□□ 0.62
CDC42BPB-204ENST00000559043 RFX7Q2KHR2 1363 aa18.92■□□□□ 0.62
CDC42BPB-204ENST00000559043 GAKO14976 1311 aa18.92■□□□□ 0.62
CDC42BPB-204ENST00000559043 ZC3H4Q9UPT8 1303 aaKnown RBP18.92■□□□□ 0.62
CDC42BPB-204ENST00000559043 ZNF280AP59817 542 aaPredicted RBP18.92■□□□□ 0.62
CDC42BPB-204ENST00000559043 ZSCAN25Q6NSZ9 544 aa18.92■□□□□ 0.62
CDC42BPB-204ENST00000559043 APOBEC3HQ6NTF7 200 aaKnown RBP18.92■□□□□ 0.62
CDC42BPB-204ENST00000559043 ZNF589Q86UQ0 364 aaPredicted RBP18.92■□□□□ 0.62
CDC42BPB-204ENST00000559043 MICALL2Q8IY33 904 aa18.92■□□□□ 0.62
CDC42BPB-204ENST00000559043 DIAPH3Q9NSV4 1193 aa18.92■□□□□ 0.62
CDC42BPB-204ENST00000559043 GPRC5DQ9NZD1 345 aa18.92■□□□□ 0.62
CDC42BPB-204ENST00000559043 MROH7-TTC4A0A0A0MT08 1334 aa18.92■□□□□ 0.62
CDC42BPB-204ENST00000559043 MAST3O60307 1309 aa18.92■□□□□ 0.62
CDC42BPB-204ENST00000559043 POTECB2RU33 542 aa18.92■□□□□ 0.62
CDC42BPB-204ENST00000559043 MCCP23508 829 aa18.92■□□□□ 0.62
CDC42BPB-204ENST00000559043 HHIPL2Q6UWX4 724 aa18.92■□□□□ 0.62
CDC42BPB-204ENST00000559043 SAMD7Q7Z3H4 446 aa18.92■□□□□ 0.62
CDC42BPB-204ENST00000559043 TICAM2Q86XR7 235 aa18.92■□□□□ 0.62
CDC42BPB-204ENST00000559043 PRMT6Q96LA8 375 aaPredicted RBP18.92■□□□□ 0.62
CDC42BPB-204ENST00000559043 RIOK1Q9BRS2 568 aaKnown RBP18.92■□□□□ 0.62
CDC42BPB-204ENST00000559043 GPR75-ASB3A0A0A6YYF3 556 aa18.91■□□□□ 0.62
CDC42BPB-204ENST00000559043 HDLBPQ00341 1268 aaKnown RBP18.91■□□□□ 0.62
CDC42BPB-204ENST00000559043 CFAP100Q494V2 611 aa18.91■□□□□ 0.62
CDC42BPB-204ENST00000559043 DPY19L2Q6NUT2 758 aa18.91■□□□□ 0.62
CDC42BPB-204ENST00000559043 ZDHHC15Q96MV8 337 aa18.91■□□□□ 0.62
CDC42BPB-204ENST00000559043 AATFQ9NY61 560 aaKnown RBP eCLIP18.91■□□□□ 0.62
CDC42BPB-204ENST00000559043 SERPINA10Q9UK55 444 aa18.91■□□□□ 0.62
CDC42BPB-204ENST00000559043 GSTO1P78417 241 aa18.9■□□□□ 0.62
CDC42BPB-204ENST00000559043 LCORLQ8N3X6 602 aa18.9■□□□□ 0.62
CDC42BPB-204ENST00000559043 OGFOD1Q8N543 542 aa18.9■□□□□ 0.62
CDC42BPB-204ENST00000559043 TEKT1Q969V4 418 aa18.9■□□□□ 0.62
CDC42BPB-204ENST00000559043 ARMT1Q9H993 441 aa18.9■□□□□ 0.62
CDC42BPB-204ENST00000559043 CWC22Q9HCG8 908 aaKnown RBP18.9■□□□□ 0.62
CDC42BPB-204ENST00000559043 HELLSQ9NRZ9 838 aa18.9■□□□□ 0.62
CDC42BPB-204ENST00000559043 MAST2Q6P0Q8 1798 aa18.9■□□□□ 0.62
CDC42BPB-204ENST00000559043 IGSF3O75054 1194 aa18.9■□□□□ 0.62
CDC42BPB-204ENST00000559043 BTDP43251 543 aa18.9■□□□□ 0.62
CDC42BPB-204ENST00000559043 MCMDC2Q4G0Z9 681 aa18.9■□□□□ 0.62
CDC42BPB-204ENST00000559043 RBM26Q5T8P6 1007 aaKnown RBP18.9■□□□□ 0.62
CDC42BPB-204ENST00000559043 ZBED3Q96IU2 234 aaPredicted RBP18.9■□□□□ 0.62
CDC42BPB-204ENST00000559043 ANO2Q9NQ90 1003 aa18.9■□□□□ 0.62
CDC42BPB-204ENST00000559043 HIP1O00291 1037 aa18.89■□□□□ 0.61
CDC42BPB-204ENST00000559043 FOXP2O15409 715 aa18.89■□□□□ 0.61
CDC42BPB-204ENST00000559043 SGSM2O43147 1006 aa18.89■□□□□ 0.61
CDC42BPB-204ENST00000559043 MBD4O95243 580 aa18.89■□□□□ 0.61
CDC42BPB-204ENST00000559043 LDHCP07864 332 aa18.89■□□□□ 0.61
CDC42BPB-204ENST00000559043 PTMSP20962 102 aa18.89■□□□□ 0.61
CDC42BPB-204ENST00000559043 RHBDL3P58872 404 aa18.89■□□□□ 0.61
CDC42BPB-204ENST00000559043 PPP4CP60510 307 aa18.89■□□□□ 0.61
CDC42BPB-204ENST00000559043 LRRFIP1Q32MZ4 808 aaKnown RBP18.89■□□□□ 0.61
CDC42BPB-204ENST00000559043 L3MBTL3Q96JM7 780 aaPredicted RBP18.89■□□□□ 0.61
CDC42BPB-204ENST00000559043 STRBPQ96SI9 672 aaKnown RBP18.89■□□□□ 0.61
CDC42BPB-204ENST00000559043 MYOZ2Q9NPC6 264 aa18.89■□□□□ 0.61
CDC42BPB-204ENST00000559043 PRKAB2O43741 272 aa18.88■□□□□ 0.61
CDC42BPB-204ENST00000559043 MCM2P49736 904 aa18.88■□□□□ 0.61
CDC42BPB-204ENST00000559043 RBM5P52756 815 aaKnown RBP eCLIP18.88■□□□□ 0.61
CDC42BPB-204ENST00000559043 HIRAP54198 1017 aaPredicted RBP18.88■□□□□ 0.61
CDC42BPB-204ENST00000559043 NBPF9Q3BBW0 867 aa18.88■□□□□ 0.61
CDC42BPB-204ENST00000559043 TBC1D10BQ4KMP7 808 aaPredicted RBP18.88■□□□□ 0.61
CDC42BPB-204ENST00000559043 VPS53Q5VIR6 699 aa18.88■□□□□ 0.61
CDC42BPB-204ENST00000559043 IL27Q8NEV9 243 aa18.88■□□□□ 0.61
CDC42BPB-204ENST00000559043 PALD1Q9ULE6 856 aa18.88■□□□□ 0.61
CDC42BPB-204ENST00000559043 MAGEB6P1A0A0J9YX57 407 aa18.88■□□□□ 0.61
CDC42BPB-204ENST00000559043 SPDYE2BA6NHP3 402 aa18.88■□□□□ 0.61
CDC42BPB-204ENST00000559043 GPAA1O43292 621 aa18.88■□□□□ 0.61
CDC42BPB-204ENST00000559043 SPDYE6P0CI01 402 aa18.88■□□□□ 0.61
CDC42BPB-204ENST00000559043 NUCB2P80303 420 aa18.88■□□□□ 0.61
CDC42BPB-204ENST00000559043 TRPM4Q8TD43 1214 aa18.88■□□□□ 0.61
CDC42BPB-204ENST00000559043 SH3RF3Q8TEJ3 882 aaPredicted RBP18.88■□□□□ 0.61
CDC42BPB-204ENST00000559043 HDAC9Q9UKV0 1011 aa18.88■□□□□ 0.61
CDC42BPB-204ENST00000559043 ASTN2O75129 1339 aaPredicted RBP18.87■□□□□ 0.61
CDC42BPB-204ENST00000559043 WNT10BO00744 389 aa18.87■□□□□ 0.61
CDC42BPB-204ENST00000559043 CDC42EP5Q6NZY7 148 aa18.87■□□□□ 0.61
CDC42BPB-204ENST00000559043 TMED8Q6PL24 325 aaPredicted RBP18.87■□□□□ 0.61
CDC42BPB-204ENST00000559043 SLF2Q8IX21 1173 aa18.87■□□□□ 0.61
CDC42BPB-204ENST00000559043 MTMR14Q8NCE2 650 aa18.87■□□□□ 0.61
CDC42BPB-204ENST00000559043 TDRD3Q9H7E2 651 aaKnown RBP18.87■□□□□ 0.61
CDC42BPB-204ENST00000559043 NEK4P51957 841 aa18.86■□□□□ 0.61
CDC42BPB-204ENST00000559043 DLGAP5Q15398 846 aa18.86■□□□□ 0.61
CDC42BPB-204ENST00000559043 H7C1D1 291 aa18.86■□□□□ 0.61
CDC42BPB-204ENST00000559043 HSPA4P34932 840 aa18.86■□□□□ 0.61
CDC42BPB-204ENST00000559043 CACNB3P54284 484 aa18.86■□□□□ 0.61
CDC42BPB-204ENST00000559043 PTH1RQ03431 593 aa18.86■□□□□ 0.61
CDC42BPB-204ENST00000559043 AIDAQ96BJ3 306 aa18.86■□□□□ 0.61
CDC42BPB-204ENST00000559043 USP40Q9NVE5 1235 aa18.85■□□□□ 0.61
CDC42BPB-204ENST00000559043 CCDC171Q6TFL3 1326 aa18.85■□□□□ 0.61
CDC42BPB-204ENST00000559043 FSD2A1L4K1 749 aa18.84■□□□□ 0.61
CDC42BPB-204ENST00000559043 SKOR2Q2VWA4 1001 aaPredicted RBP18.84■□□□□ 0.61
CDC42BPB-204ENST00000559043 L1TD1Q5T7N2 865 aaKnown RBP18.84■□□□□ 0.61
CDC42BPB-204ENST00000559043 SDR42E1Q8WUS8 393 aa18.84■□□□□ 0.61
CDC42BPB-204ENST00000559043 RUFY2Q8WXA3 655 aa18.84■□□□□ 0.61
CDC42BPB-204ENST00000559043 RAD50Q92878 1312 aa18.84■□□□□ 0.61
CDC42BPB-204ENST00000559043 GSG1L2A8MUP6 293 aa18.84■□□□□ 0.61
CDC42BPB-204ENST00000559043 WDHD1O75717 1129 aaPredicted RBP18.84■□□□□ 0.61
CDC42BPB-204ENST00000559043 BAG3O95817 575 aa18.84■□□□□ 0.61
CDC42BPB-204ENST00000559043 KIF4BQ2VIQ3 1234 aa18.84■□□□□ 0.61
CDC42BPB-204ENST00000559043 SCAF8Q9UPN6 1271 aaKnown RBP18.84■□□□□ 0.61
CDC42BPB-204ENST00000559043 CLRN2A0PK11 232 aa18.83■□□□□ 0.61
CDC42BPB-204ENST00000559043 HSPD1P10809 573 aaKnown RBP18.83■□□□□ 0.61
CDC42BPB-204ENST00000559043 MMP14P50281 582 aa18.83■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms