RNA–Protein interactions for RNA: ENST00000558966.5

CTDSPL2-204, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-204ENST00000558966 SNAP23O00161 211 aa7.57□□□□□ -1.2
CTDSPL2-204ENST00000558966 BCAR3O75815 825 aa7.57□□□□□ -1.2
CTDSPL2-204ENST00000558966 CCDC57Q2TAC2 916 aa7.57□□□□□ -1.2
CTDSPL2-204ENST00000558966 API5Q9BZZ5 524 aaKnown RBP7.57□□□□□ -1.2
CTDSPL2-204ENST00000558966 ANKRD2Q9GZV1 360 aa7.57□□□□□ -1.2
CTDSPL2-204ENST00000558966 ADARB2Q9NS39 739 aaKnown RBP7.57□□□□□ -1.2
CTDSPL2-204ENST00000558966 TNNQ9UQP3 1299 aa7.57□□□□□ -1.2
CTDSPL2-204ENST00000558966 LEMD3Q9Y2U8 911 aa7.57□□□□□ -1.2
CTDSPL2-204ENST00000558966 ZNF804BA4D1E1 1349 aa7.56□□□□□ -1.2
CTDSPL2-204ENST00000558966 PASKQ96RG2 1323 aa7.56□□□□□ -1.2
CTDSPL2-204ENST00000558966 ZNF609O15014 1411 aa7.56□□□□□ -1.2
CTDSPL2-204ENST00000558966 POTEB3A0JP26 581 aa7.56□□□□□ -1.2
CTDSPL2-204ENST00000558966 ITGBL1O95965 494 aaPredicted RBP7.56□□□□□ -1.2
CTDSPL2-204ENST00000558966 VIL1P09327 827 aaKnown RBP7.56□□□□□ -1.2
CTDSPL2-204ENST00000558966 FUT2Q10981 343 aa7.56□□□□□ -1.2
CTDSPL2-204ENST00000558966 PRPF38BQ5VTL8 546 aaKnown RBP7.56□□□□□ -1.2
CTDSPL2-204ENST00000558966 MAP1SQ66K74 1059 aaPredicted RBP7.56□□□□□ -1.2
CTDSPL2-204ENST00000558966 POTEBQ6S5H4 581 aa7.56□□□□□ -1.2
CTDSPL2-204ENST00000558966 USP50Q70EL3 339 aaPredicted RBP7.56□□□□□ -1.2
CTDSPL2-204ENST00000558966 HELBQ8NG08 1087 aaPredicted RBP7.56□□□□□ -1.2
CTDSPL2-204ENST00000558966 TRPM4Q8TD43 1214 aa7.56□□□□□ -1.2
CTDSPL2-204ENST00000558966 ARHGAP45Q92619 1136 aa7.56□□□□□ -1.2
CTDSPL2-204ENST00000558966 PUS3Q9BZE2 481 aaKnown RBP7.56□□□□□ -1.2
CTDSPL2-204ENST00000558966 TAF5LO75529 589 aa7.55□□□□□ -1.2
CTDSPL2-204ENST00000558966 EGFRP00533 1210 aa7.55□□□□□ -1.2
CTDSPL2-204ENST00000558966 CFHP08603 1231 aa7.55□□□□□ -1.2
CTDSPL2-204ENST00000558966 USP17L8P0C7I0 530 aa7.55□□□□□ -1.2
CTDSPL2-204ENST00000558966 TRIM27P14373 513 aa7.55□□□□□ -1.2
CTDSPL2-204ENST00000558966 HIRAP54198 1017 aaPredicted RBP7.55□□□□□ -1.2
CTDSPL2-204ENST00000558966 TAF7LQ5H9L4 462 aa7.55□□□□□ -1.2
CTDSPL2-204ENST00000558966 LDHAL6AQ6ZMR3 332 aa7.55□□□□□ -1.2
CTDSPL2-204ENST00000558966 SLF2Q8IX21 1173 aa7.55□□□□□ -1.2
CTDSPL2-204ENST00000558966 DNAJC5GQ8N7S2 189 aa7.55□□□□□ -1.2
CTDSPL2-204ENST00000558966 DPF2Q92785 391 aa7.55□□□□□ -1.2
CTDSPL2-204ENST00000558966 FAM163AQ96GL9 167 aaPredicted RBP7.55□□□□□ -1.2
CTDSPL2-204ENST00000558966 CNOT7Q9UIV1 285 aaKnown RBP7.55□□□□□ -1.2
CTDSPL2-204ENST00000558966 RPS12P25398 132 aaKnown RBP7.55□□□□□ -1.2
CTDSPL2-204ENST00000558966 SLC4A3P48751 1232 aa7.55□□□□□ -1.2
CTDSPL2-204ENST00000558966 INTS3Q68E01 1043 aaKnown RBP7.55□□□□□ -1.2
CTDSPL2-204ENST00000558966 C15orf52Q6ZUT6 534 aaKnown RBP7.55□□□□□ -1.2
CTDSPL2-204ENST00000558966 PODNQ7Z5L7 613 aa7.55□□□□□ -1.2
CTDSPL2-204ENST00000558966 CNTROBQ8N137 903 aa7.55□□□□□ -1.2
CTDSPL2-204ENST00000558966 FRAT1Q92837 279 aaPredicted RBP7.55□□□□□ -1.2
CTDSPL2-204ENST00000558966 GMLQ99445 158 aa7.55□□□□□ -1.2
CTDSPL2-204ENST00000558966 MEIS3Q99687 375 aa7.55□□□□□ -1.2
CTDSPL2-204ENST00000558966 COA1Q9GZY4 146 aa7.55□□□□□ -1.2
CTDSPL2-204ENST00000558966 NBPF3Q9H094 633 aa7.55□□□□□ -1.2
CTDSPL2-204ENST00000558966 CNNM1Q9NRU3 951 aa7.55□□□□□ -1.2
CTDSPL2-204ENST00000558966 BHMG1C9JSJ3 638 aaPredicted RBP7.54□□□□□ -1.2
CTDSPL2-204ENST00000558966 UBTFL1P0CB47 393 aaPredicted RBP7.54□□□□□ -1.2
CTDSPL2-204ENST00000558966 KCNJ4P48050 445 aa7.54□□□□□ -1.2
CTDSPL2-204ENST00000558966 RFX5P48382 616 aaPredicted RBP7.54□□□□□ -1.2
CTDSPL2-204ENST00000558966 FMR1Q06787 632 aaKnown RBP eCLIP7.54□□□□□ -1.2
CTDSPL2-204ENST00000558966 LRRC24Q50LG9 513 aa7.54□□□□□ -1.2
CTDSPL2-204ENST00000558966 ATF7IPQ6VMQ6 1270 aa7.54□□□□□ -1.2
CTDSPL2-204ENST00000558966 KLHDC4Q8TBB5 520 aa7.54□□□□□ -1.2
CTDSPL2-204ENST00000558966 ZFRQ96KR1 1074 aaKnown RBP7.54□□□□□ -1.2
CTDSPL2-204ENST00000558966 HS3ST6Q96QI5 342 aa7.54□□□□□ -1.2
CTDSPL2-204ENST00000558966 RIPOR2Q9Y4F9 1068 aa7.54□□□□□ -1.2
CTDSPL2-204ENST00000558966 TRPM7Q96QT4 1865 aa7.54□□□□□ -1.2
CTDSPL2-204ENST00000558966 USP17L3A6NCW0 530 aa7.53□□□□□ -1.2
CTDSPL2-204ENST00000558966 USP17L4A6NCW7 530 aa7.53□□□□□ -1.2
CTDSPL2-204ENST00000558966 H7C1D1 291 aa7.53□□□□□ -1.2
CTDSPL2-204ENST00000558966 IPO8O15397 1037 aaKnown RBP7.53□□□□□ -1.2
CTDSPL2-204ENST00000558966 PLIN1O60240 522 aa7.53□□□□□ -1.2
CTDSPL2-204ENST00000558966 ABL2P42684 1182 aa7.53□□□□□ -1.2
CTDSPL2-204ENST00000558966 TBC1D10BQ4KMP7 808 aaPredicted RBP7.53□□□□□ -1.2
CTDSPL2-204ENST00000558966 DACT2Q5SW24 774 aa7.53□□□□□ -1.2
CTDSPL2-204ENST00000558966 USP17L1Q7RTZ2 530 aa7.53□□□□□ -1.2
CTDSPL2-204ENST00000558966 AGBL3Q8NEM8 1001 aa7.53□□□□□ -1.2
CTDSPL2-204ENST00000558966 TSC1Q92574 1164 aa7.53□□□□□ -1.2
CTDSPL2-204ENST00000558966 MXD3Q9BW11 206 aa7.53□□□□□ -1.2
CTDSPL2-204ENST00000558966 PGAP2Q9UHJ9 254 aa7.53□□□□□ -1.2
CTDSPL2-204ENST00000558966 LRRFIP2Q9Y608 721 aaKnown RBP7.53□□□□□ -1.2
CTDSPL2-204ENST00000558966 POLR2AP24928 1970 aaKnown RBP7.53□□□□□ -1.2
CTDSPL2-204ENST00000558966 TRAF5O00463 557 aa7.53□□□□□ -1.2
CTDSPL2-204ENST00000558966 ZNF280AP59817 542 aaPredicted RBP7.53□□□□□ -1.2
CTDSPL2-204ENST00000558966 PTPN12Q05209 780 aaKnown RBP7.53□□□□□ -1.2
CTDSPL2-204ENST00000558966 CTDSPL2Q05D32 466 aa7.53□□□□□ -1.2
CTDSPL2-204ENST00000558966 MTMR2Q13614 643 aa7.53□□□□□ -1.2
CTDSPL2-204ENST00000558966 ZKSCAN2Q63HK3 967 aa7.53□□□□□ -1.2
CTDSPL2-204ENST00000558966 LAPTM4BQ86VI4 370 aa7.53□□□□□ -1.2
CTDSPL2-204ENST00000558966 VGLL2Q8N8G2 317 aa7.53□□□□□ -1.2
CTDSPL2-204ENST00000558966 SYMPKQ92797 1274 aaKnown RBP7.53□□□□□ -1.2
CTDSPL2-204ENST00000558966 KLRG1Q96E93 195 aa7.53□□□□□ -1.2
CTDSPL2-204ENST00000558966 CD209Q9NNX6 404 aa7.53□□□□□ -1.2
CTDSPL2-204ENST00000558966 MROH5Q6ZUA9 1318 aa7.52□□□□□ -1.2
CTDSPL2-204ENST00000558966 UBE4AQ14139 1066 aa7.52□□□□□ -1.21
CTDSPL2-204ENST00000558966 KIF4BQ2VIQ3 1234 aa7.52□□□□□ -1.21
CTDSPL2-204ENST00000558966 STRIP1Q5VSL9 837 aa7.52□□□□□ -1.21
CTDSPL2-204ENST00000558966 TMEM57Q8N5G2 664 aa7.52□□□□□ -1.21
CTDSPL2-204ENST00000558966 GLIS2Q9BZE0 524 aaPredicted RBP7.52□□□□□ -1.21
CTDSPL2-204ENST00000558966 ASTN2O75129 1339 aaPredicted RBP7.52□□□□□ -1.21
CTDSPL2-204ENST00000558966 TMEM88BA6NKF7 163 aa7.51□□□□□ -1.21
CTDSPL2-204ENST00000558966 RLBP1P12271 317 aa7.51□□□□□ -1.21
CTDSPL2-204ENST00000558966 IL1R1P14778 569 aa7.51□□□□□ -1.21
CTDSPL2-204ENST00000558966 GTF2IP78347 998 aa7.51□□□□□ -1.21
CTDSPL2-204ENST00000558966 METTL24Q5JXM2 366 aa7.51□□□□□ -1.21
CTDSPL2-204ENST00000558966 TTLL5Q6EMB2 1281 aa7.51□□□□□ -1.21
CTDSPL2-204ENST00000558966 ATG9AQ7Z3C6 839 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms