RNA–Protein interactions for RNA: ENST00000558787.1

MARK3-215, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 2

Gene MARK3, Length 758 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-215ENST00000558787 CCDC27Q2M243 656 aa8.97□□□□□ -0.97
MARK3-215ENST00000558787 CCDC152Q4G0S7 254 aa8.97□□□□□ -0.97
MARK3-215ENST00000558787 CYP4F22Q6NT55 531 aa8.97□□□□□ -0.97
MARK3-215ENST00000558787 USP48Q86UV5 1035 aa8.97□□□□□ -0.97
MARK3-215ENST00000558787 RETREG3Q86VR2 466 aa8.97□□□□□ -0.97
MARK3-215ENST00000558787 CRIPAKQ8N1N5 446 aa8.97□□□□□ -0.97
MARK3-215ENST00000558787 SNIP1Q8TAD8 396 aaKnown RBP8.97□□□□□ -0.97
MARK3-215ENST00000558787 SYMPKQ92797 1274 aaKnown RBP8.97□□□□□ -0.97
MARK3-215ENST00000558787 REPIN1Q9BWE0 567 aaKnown RBP8.97□□□□□ -0.97
MARK3-215ENST00000558787 STK31Q9BXU1 1019 aa8.97□□□□□ -0.97
MARK3-215ENST00000558787 ZC3H12CQ9C0D7 883 aaKnown RBP8.97□□□□□ -0.97
MARK3-215ENST00000558787 ZNF408Q9H9D4 720 aa8.97□□□□□ -0.97
MARK3-215ENST00000558787 WDR33Q9C0J8 1336 aaKnown RBP8.97□□□□□ -0.97
MARK3-215ENST00000558787 RTL9Q8NET4 1388 aa8.97□□□□□ -0.97
MARK3-215ENST00000558787 H7C1D1 291 aa8.96□□□□□ -0.98
MARK3-215ENST00000558787 ANP32CO43423 234 aa8.96□□□□□ -0.98
MARK3-215ENST00000558787 AOC2O75106 756 aa8.96□□□□□ -0.98
MARK3-215ENST00000558787 CELF2O95319 508 aaKnown RBP8.96□□□□□ -0.98
MARK3-215ENST00000558787 PRKCSHP14314 528 aaPredicted RBP8.96□□□□□ -0.98
MARK3-215ENST00000558787 CTC1Q2NKJ3 1217 aa8.96□□□□□ -0.98
MARK3-215ENST00000558787 ZC3H15Q8WU90 426 aaKnown RBP8.96□□□□□ -0.98
MARK3-215ENST00000558787 CAPNS2Q96L46 248 aa8.96□□□□□ -0.98
MARK3-215ENST00000558787 PGAP2Q9UHJ9 254 aa8.96□□□□□ -0.98
MARK3-215ENST00000558787 LRRC37AA6NMS7 1700 aa8.96□□□□□ -0.98
MARK3-215ENST00000558787 NEURL1BA8MQ27 555 aa8.95□□□□□ -0.98
MARK3-215ENST00000558787 LBX1P52954 281 aa8.95□□□□□ -0.98
MARK3-215ENST00000558787 CTSWP56202 376 aa8.95□□□□□ -0.98
MARK3-215ENST00000558787 EXOSC9Q06265 439 aaKnown RBP8.95□□□□□ -0.98
MARK3-215ENST00000558787 UBE3BQ7Z3V4 1068 aa8.95□□□□□ -0.98
MARK3-215ENST00000558787 ANKRD18AQ8IVF6 992 aa8.95□□□□□ -0.98
MARK3-215ENST00000558787 TTLL11Q8NHH1 800 aa8.95□□□□□ -0.98
MARK3-215ENST00000558787 AIDAQ96BJ3 306 aa8.95□□□□□ -0.98
MARK3-215ENST00000558787 MRGPRX2Q96LB1 330 aa8.95□□□□□ -0.98
MARK3-215ENST00000558787 EYA3Q99504 573 aa8.95□□□□□ -0.98
MARK3-215ENST00000558787 GREM2Q9H772 168 aa8.95□□□□□ -0.98
MARK3-215ENST00000558787 PODXL2Q9NZ53 605 aa8.95□□□□□ -0.98
MARK3-215ENST00000558787 GGA1Q9UJY5 639 aa8.95□□□□□ -0.98
MARK3-215ENST00000558787 TLL2Q9Y6L7 1015 aa8.95□□□□□ -0.98
MARK3-215ENST00000558787 ASTN2O75129 1339 aaPredicted RBP8.95□□□□□ -0.98
MARK3-215ENST00000558787 FANCIQ9NVI1 1328 aa8.95□□□□□ -0.98
MARK3-215ENST00000558787 ADM5C9JUS6 153 aa8.94□□□□□ -0.98
MARK3-215ENST00000558787 H7C1W4 665 aa8.94□□□□□ -0.98
MARK3-215ENST00000558787 VAMP4O75379 141 aa8.94□□□□□ -0.98
MARK3-215ENST00000558787 HSP90B1P14625 803 aaKnown RBP8.94□□□□□ -0.98
MARK3-215ENST00000558787 CTCFP49711 727 aaPredicted RBP8.94□□□□□ -0.98
MARK3-215ENST00000558787 NEXNQ0ZGT2 675 aa8.94□□□□□ -0.98
MARK3-215ENST00000558787 FLIIQ13045 1269 aa8.94□□□□□ -0.98
MARK3-215ENST00000558787 CDC37L1Q7L3B6 337 aa8.94□□□□□ -0.98
MARK3-215ENST00000558787 SAPCD2Q86UD0 394 aa8.94□□□□□ -0.98
MARK3-215ENST00000558787 FAM9BQ8IZU0 186 aa8.94□□□□□ -0.98
MARK3-215ENST00000558787 SPIRE2Q8WWL2 714 aa8.94□□□□□ -0.98
MARK3-215ENST00000558787 DPF2Q92785 391 aa8.94□□□□□ -0.98
MARK3-215ENST00000558787 MXD3Q9BW11 206 aa8.94□□□□□ -0.98
MARK3-215ENST00000558787 CHMP4AQ9BY43 222 aa8.94□□□□□ -0.98
MARK3-215ENST00000558787 MINPP1Q9UNW1 487 aa8.94□□□□□ -0.98
MARK3-215ENST00000558787 IL16Q14005 1332 aa8.94□□□□□ -0.98
MARK3-215ENST00000558787 CDHR2Q9BYE9 1310 aa8.94□□□□□ -0.98
MARK3-215ENST00000558787 F6X3S4 739 aa8.93□□□□□ -0.98
MARK3-215ENST00000558787 VIL1P09327 827 aaKnown RBP8.93□□□□□ -0.98
MARK3-215ENST00000558787 HSPA8P11142 646 aaKnown RBP8.93□□□□□ -0.98
MARK3-215ENST00000558787 SMCPP49901 116 aaPredicted RBP8.93□□□□□ -0.98
MARK3-215ENST00000558787 WNT7BP56706 349 aa8.93□□□□□ -0.98
MARK3-215ENST00000558787 FKBP5Q13451 457 aaPredicted RBP8.93□□□□□ -0.98
MARK3-215ENST00000558787 GCKRQ14397 625 aa8.93□□□□□ -0.98
MARK3-215ENST00000558787 AMHR2Q16671 573 aa8.93□□□□□ -0.98
MARK3-215ENST00000558787 DIEXFQ68CQ4 756 aaKnown RBP8.93□□□□□ -0.98
MARK3-215ENST00000558787 NUDT12Q9BQG2 462 aa8.93□□□□□ -0.98
MARK3-215ENST00000558787 SCAF8Q9UPN6 1271 aaKnown RBP8.93□□□□□ -0.98
MARK3-215ENST00000558787 SCN9AQ15858 1988 aa8.93□□□□□ -0.98
MARK3-215ENST00000558787 XDHP47989 1333 aa8.92□□□□□ -0.98
MARK3-215ENST00000558787 SNAP23O00161 211 aa8.92□□□□□ -0.98
MARK3-215ENST00000558787 ATP2B4P23634 1241 aa8.92□□□□□ -0.98
MARK3-215ENST00000558787 RPS12P25398 132 aaKnown RBP8.92□□□□□ -0.98
MARK3-215ENST00000558787 ECE1P42892 770 aa8.92□□□□□ -0.98
MARK3-215ENST00000558787 CASP7P55210 303 aa8.92□□□□□ -0.98
MARK3-215ENST00000558787 MAP2K1Q02750 393 aaPredicted RBP8.92□□□□□ -0.98
MARK3-215ENST00000558787 RSBN1LQ6PCB5 846 aaPredicted RBP8.92□□□□□ -0.98
MARK3-215ENST00000558787 KRT26Q7Z3Y9 468 aa8.92□□□□□ -0.98
MARK3-215ENST00000558787 TXNRD3Q86VQ6 643 aa8.92□□□□□ -0.98
MARK3-215ENST00000558787 WDR63Q8IWG1 891 aa8.92□□□□□ -0.98
MARK3-215ENST00000558787 DNAAF4Q8WXU2 420 aa8.92□□□□□ -0.98
MARK3-215ENST00000558787 ZIC5Q96T25 663 aa8.92□□□□□ -0.98
MARK3-215ENST00000558787 CDC5LQ99459 802 aaKnown RBP8.92□□□□□ -0.98
MARK3-215ENST00000558787 PRDM10Q9NQV6 1147 aa8.92□□□□□ -0.98
MARK3-215ENST00000558787 BSDC1Q9NW68 430 aaPredicted RBP8.92□□□□□ -0.98
MARK3-215ENST00000558787 PCDHGC3Q9UN70 934 aa8.92□□□□□ -0.98
MARK3-215ENST00000558787 TRPM7Q96QT4 1865 aa8.91□□□□□ -0.98
MARK3-215ENST00000558787 SMPD1P17405 629 aa8.91□□□□□ -0.98
MARK3-215ENST00000558787 ITGA6P23229 1130 aa8.91□□□□□ -0.98
MARK3-215ENST00000558787 KLRK1P26718 216 aa8.91□□□□□ -0.98
MARK3-215ENST00000558787 SCARF1Q14162 830 aa8.91□□□□□ -0.98
MARK3-215ENST00000558787 KIF4BQ2VIQ3 1234 aa8.91□□□□□ -0.98
MARK3-215ENST00000558787 HELBQ8NG08 1087 aaPredicted RBP8.91□□□□□ -0.98
MARK3-215ENST00000558787 DCPSQ96C86 337 aaKnown RBP8.91□□□□□ -0.98
MARK3-215ENST00000558787 GGA3Q9NZ52 723 aa8.91□□□□□ -0.98
MARK3-215ENST00000558787 DACH1Q9UI36 760 aa8.91□□□□□ -0.98
MARK3-215ENST00000558787 POLR2AP24928 1970 aaKnown RBP8.9□□□□□ -0.98
MARK3-215ENST00000558787 USP17L3A6NCW0 530 aa8.9□□□□□ -0.98
MARK3-215ENST00000558787 USP17L4A6NCW7 530 aa8.9□□□□□ -0.98
MARK3-215ENST00000558787 MOXD2PA6NHM9 499 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms