RNA–Protein interactions for RNA: ENST00000558739.1

SMAD3-206, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-206ENST00000558739 PI4KAP2A4QPH2 592 aa15.29■□□□□ 0.04
SMAD3-206ENST00000558739 NEURL1BA8MQ27 555 aa15.29■□□□□ 0.04
SMAD3-206ENST00000558739 POTEB2H3BUK9 544 aa15.29■□□□□ 0.04
SMAD3-206ENST00000558739 GPAT2Q6NUI2 795 aa15.29■□□□□ 0.04
SMAD3-206ENST00000558739 MIGA2Q7L4E1 593 aa15.29■□□□□ 0.04
SMAD3-206ENST00000558739 PI4KAP1Q8N8J0 262 aa15.29■□□□□ 0.04
SMAD3-206ENST00000558739 FAM205AQ6ZU69 1335 aa15.28■□□□□ 0.04
SMAD3-206ENST00000558739 PTPRFP10586 1907 aa15.28■□□□□ 0.04
SMAD3-206ENST00000558739 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.28■□□□□ 0.04
SMAD3-206ENST00000558739 KCNH4Q9UQ05 1017 aa15.28■□□□□ 0.04
SMAD3-206ENST00000558739 PFASO15067 1338 aa15.27■□□□□ 0.04
SMAD3-206ENST00000558739 H7C1W4 665 aa15.27■□□□□ 0.04
SMAD3-206ENST00000558739 TNNI2P48788 182 aa15.27■□□□□ 0.04
SMAD3-206ENST00000558739 CASP7P55210 303 aa15.27■□□□□ 0.04
SMAD3-206ENST00000558739 MDM2Q00987 491 aaPredicted RBP15.27■□□□□ 0.04
SMAD3-206ENST00000558739 PPATQ06203 517 aa15.27■□□□□ 0.04
SMAD3-206ENST00000558739 TRIM32Q13049 653 aa15.27■□□□□ 0.04
SMAD3-206ENST00000558739 PARK7Q99497 189 aaKnown RBP15.27■□□□□ 0.04
SMAD3-206ENST00000558739 CSF1RP07333 972 aa15.26■□□□□ 0.03
SMAD3-206ENST00000558739 C8orf58Q8NAV2 365 aa15.26■□□□□ 0.03
SMAD3-206ENST00000558739 MAFAQ8NHW3 353 aaPredicted RBP15.26■□□□□ 0.03
SMAD3-206ENST00000558739 PXYLP1Q8TE99 480 aa15.26■□□□□ 0.03
SMAD3-206ENST00000558739 PLA2G12BQ9BX93 195 aa15.26■□□□□ 0.03
SMAD3-206ENST00000558739 XIRP2A4UGR9 3374 aa15.26■□□□□ 0.03
SMAD3-206ENST00000558739 TNPO2O14787 897 aaKnown RBP15.25■□□□□ 0.03
SMAD3-206ENST00000558739 DDX58O95786 925 aaKnown RBP15.25■□□□□ 0.03
SMAD3-206ENST00000558739 GYG1P46976 350 aa15.25■□□□□ 0.03
SMAD3-206ENST00000558739 KSR2Q6VAB6 950 aa15.25■□□□□ 0.03
SMAD3-206ENST00000558739 CDX2Q99626 313 aaPredicted RBP15.25■□□□□ 0.03
SMAD3-206ENST00000558739 AK9Q5TCS8 1911 aa15.25■□□□□ 0.03
SMAD3-206ENST00000558739 CHD9Q3L8U1 2897 aa15.25■□□□□ 0.03
SMAD3-206ENST00000558739 REV3LO60673 3130 aa15.24■□□□□ 0.03
SMAD3-206ENST00000558739 PLIN1O60240 522 aa15.24■□□□□ 0.03
SMAD3-206ENST00000558739 ZNF853P0CG23 659 aa15.24■□□□□ 0.03
SMAD3-206ENST00000558739 IRF5Q13568 498 aa15.24■□□□□ 0.03
SMAD3-206ENST00000558739 FAM109BQ6ICB4 259 aaPredicted RBP15.24■□□□□ 0.03
SMAD3-206ENST00000558739 TDRD7Q8NHU6 1098 aaKnown RBP15.24■□□□□ 0.03
SMAD3-206ENST00000558739 ZNF594Q96JF6 807 aaPredicted RBP15.24■□□□□ 0.03
SMAD3-206ENST00000558739 NBPF3Q9H094 633 aa15.24■□□□□ 0.03
SMAD3-206ENST00000558739 IQSEC3Q9UPP2 1182 aaPredicted RBP15.24■□□□□ 0.03
SMAD3-206ENST00000558739 G2E3Q7L622 706 aa15.23■□□□□ 0.03
SMAD3-206ENST00000558739 CCER1Q8TC90 406 aaPredicted RBP15.23■□□□□ 0.03
SMAD3-206ENST00000558739 ZNF341Q9BYN7 854 aa15.23■□□□□ 0.03
SMAD3-206ENST00000558739 C11orf49Q9H6J7 331 aa15.23■□□□□ 0.03
SMAD3-206ENST00000558739 RPAP1Q9BWH6 1393 aaPredicted RBP15.23■□□□□ 0.03
SMAD3-206ENST00000558739 PLXNB2O15031 1838 aa15.22■□□□□ 0.03
SMAD3-206ENST00000558739 ANKRD18BA2A2Z9 1011 aa15.22■□□□□ 0.03
SMAD3-206ENST00000558739 GCKRQ14397 625 aa15.22■□□□□ 0.03
SMAD3-206ENST00000558739 TSPYL6Q8N831 410 aa15.22■□□□□ 0.03
SMAD3-206ENST00000558739 ANKLE1Q8NAG6 615 aa15.22■□□□□ 0.03
SMAD3-206ENST00000558739 NEXNQ0ZGT2 675 aa15.21■□□□□ 0.03
SMAD3-206ENST00000558739 APOBEC3HQ6NTF7 200 aaKnown RBP15.21■□□□□ 0.03
SMAD3-206ENST00000558739 MYLIPQ8WY64 445 aa15.21■□□□□ 0.03
SMAD3-206ENST00000558739 FAM84BQ96KN1 310 aaPredicted RBP15.21■□□□□ 0.03
SMAD3-206ENST00000558739 PHIPQ8WWQ0 1821 aa15.21■□□□□ 0.03
SMAD3-206ENST00000558739 MAST2Q6P0Q8 1798 aa15.21■□□□□ 0.02
SMAD3-206ENST00000558739 PLA2G5P39877 138 aa15.2■□□□□ 0.02
SMAD3-206ENST00000558739 CHAF1AQ13111 956 aaPredicted RBP15.2■□□□□ 0.02
SMAD3-206ENST00000558739 LRRC26Q2I0M4 334 aa15.2■□□□□ 0.02
SMAD3-206ENST00000558739 ZNF697Q5TEC3 545 aa15.2■□□□□ 0.02
SMAD3-206ENST00000558739 DCAF15Q66K64 600 aa15.2■□□□□ 0.02
SMAD3-206ENST00000558739 FAM83AQ86UY5 434 aa15.2■□□□□ 0.02
SMAD3-206ENST00000558739 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.2■□□□□ 0.02
SMAD3-206ENST00000558739 ZNF112Q9UJU3 913 aa15.2■□□□□ 0.02
SMAD3-206ENST00000558739 CHMP3Q9Y3E7 222 aa15.2■□□□□ 0.02
SMAD3-206ENST00000558739 LTBP2Q14767 1821 aa15.2■□□□□ 0.02
SMAD3-206ENST00000558739 HMGCRP04035 888 aa15.19■□□□□ 0.02
SMAD3-206ENST00000558739 FOXO4P98177 505 aa15.19■□□□□ 0.02
SMAD3-206ENST00000558739 EPHA10Q5JZY3 1008 aa15.19■□□□□ 0.02
SMAD3-206ENST00000558739 ANKRD13CQ8N6S4 541 aa15.19■□□□□ 0.02
SMAD3-206ENST00000558739 CHD7Q9P2D1 2997 aa15.19■□□□□ 0.02
SMAD3-206ENST00000558739 DOCK2Q92608 1830 aa15.18■□□□□ 0.02
SMAD3-206ENST00000558739 A0A0G2JLL6 359 aaPredicted RBP15.18■□□□□ 0.02
SMAD3-206ENST00000558739 SLURP2P0DP57 97 aa15.18■□□□□ 0.02
SMAD3-206ENST00000558739 HIBADHP31937 336 aaKnown RBP15.18■□□□□ 0.02
SMAD3-206ENST00000558739 TCP10Q12799 353 aa15.18■□□□□ 0.02
SMAD3-206ENST00000558739 IFIT5Q13325 482 aaKnown RBP15.18■□□□□ 0.02
SMAD3-206ENST00000558739 NOL9Q5SY16 702 aaKnown RBP15.18■□□□□ 0.02
SMAD3-206ENST00000558739 GADL1Q6ZQY3 521 aa15.18■□□□□ 0.02
SMAD3-206ENST00000558739 PRRT2Q7Z6L0 340 aaPredicted RBP15.18■□□□□ 0.02
SMAD3-206ENST00000558739 USP38Q8NB14 1042 aa15.18■□□□□ 0.02
SMAD3-206ENST00000558739 TEKT1Q969V4 418 aa15.18■□□□□ 0.02
SMAD3-206ENST00000558739 TTYH1Q9H313 450 aaPredicted RBP15.18■□□□□ 0.02
SMAD3-206ENST00000558739 OGDHLQ9ULD0 1010 aa15.18■□□□□ 0.02
SMAD3-206ENST00000558739 FRMPD3Q5JV73 1810 aa15.17■□□□□ 0.02
SMAD3-206ENST00000558739 MUC6Q6W4X9 2439 aa15.17■□□□□ 0.02
SMAD3-206ENST00000558739 COL6A1P12109 1028 aa15.17■□□□□ 0.02
SMAD3-206ENST00000558739 NFIAQ12857 509 aa15.17■□□□□ 0.02
SMAD3-206ENST00000558739 CCDC30Q5VVM6 783 aa15.17■□□□□ 0.02
SMAD3-206ENST00000558739 CCDC84Q86UT8 332 aaPredicted RBP15.17■□□□□ 0.02
SMAD3-206ENST00000558739 SMCR8Q8TEV9 937 aaPredicted RBP15.17■□□□□ 0.02
SMAD3-206ENST00000558739 RUNDC1Q96C34 613 aa15.17■□□□□ 0.02
SMAD3-206ENST00000558739 ZDHHC15Q96MV8 337 aa15.17■□□□□ 0.02
SMAD3-206ENST00000558739 IFT57Q9NWB7 429 aa15.17■□□□□ 0.02
SMAD3-206ENST00000558739 TMOD2Q9NZR1 351 aa15.17■□□□□ 0.02
SMAD3-206ENST00000558739 MYO9BQ13459 2157 aa15.17■□□□□ 0.02
SMAD3-206ENST00000558739 ATRNL1Q5VV63 1379 aa15.16■□□□□ 0.02
SMAD3-206ENST00000558739 CAPN2P17655 700 aa15.16■□□□□ 0.02
SMAD3-206ENST00000558739 FKBP1CQ5VVH2 108 aa15.16■□□□□ 0.02
SMAD3-206ENST00000558739 TRIB2Q92519 343 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms