RNA–Protein interactions for RNA: ENST00000558298.5

RTF1-205, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 5

Gene RTF1, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-205ENST00000558298 GGA3Q9NZ52 723 aa9.58□□□□□ -0.88
RTF1-205ENST00000558298 SERPINA10Q9UK55 444 aa9.58□□□□□ -0.88
RTF1-205ENST00000558298 HDAC9Q9UKV0 1011 aa9.58□□□□□ -0.88
RTF1-205ENST00000558298 ZKSCAN5Q9Y2L8 839 aa9.58□□□□□ -0.88
RTF1-205ENST00000558298 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.58□□□□□ -0.88
RTF1-205ENST00000558298 FOCADQ5VW36 1801 aa9.58□□□□□ -0.88
RTF1-205ENST00000558298 MYH7P12883 1935 aa9.58□□□□□ -0.88
RTF1-205ENST00000558298 MYH2Q9UKX2 1941 aa9.58□□□□□ -0.88
RTF1-205ENST00000558298 ADM5C9JUS6 153 aa9.57□□□□□ -0.88
RTF1-205ENST00000558298 WNT10BO00744 389 aa9.57□□□□□ -0.88
RTF1-205ENST00000558298 TPM3P06753 285 aa9.57□□□□□ -0.88
RTF1-205ENST00000558298 UQCRFS1P1P0C7P4 283 aa9.57□□□□□ -0.88
RTF1-205ENST00000558298 PHKA1P46020 1223 aa9.57□□□□□ -0.88
RTF1-205ENST00000558298 BCAMP50895 628 aa9.57□□□□□ -0.88
RTF1-205ENST00000558298 RASGRF1Q13972 1273 aa9.57□□□□□ -0.88
RTF1-205ENST00000558298 DLK2Q6UY11 383 aa9.57□□□□□ -0.88
RTF1-205ENST00000558298 SAPCD2Q86UD0 394 aa9.57□□□□□ -0.88
RTF1-205ENST00000558298 PDCL2Q8N4E4 241 aa9.57□□□□□ -0.88
RTF1-205ENST00000558298 RHPN1Q8TCX5 695 aa9.57□□□□□ -0.88
RTF1-205ENST00000558298 GZF1Q9H116 711 aaPredicted RBP9.57□□□□□ -0.88
RTF1-205ENST00000558298 CWC22Q9HCG8 908 aaKnown RBP9.57□□□□□ -0.88
RTF1-205ENST00000558298 MKRN1Q9UHC7 482 aaKnown RBP9.57□□□□□ -0.88
RTF1-205ENST00000558298 SSC5DA1L4H1 1573 aa9.57□□□□□ -0.88
RTF1-205ENST00000558298 RFX7Q2KHR2 1363 aa9.56□□□□□ -0.88
RTF1-205ENST00000558298 RPAP1Q9BWH6 1393 aaPredicted RBP9.56□□□□□ -0.88
RTF1-205ENST00000558298 UQCRHLA0A096LP55 91 aa9.56□□□□□ -0.88
RTF1-205ENST00000558298 SPDYE2BA6NHP3 402 aa9.56□□□□□ -0.88
RTF1-205ENST00000558298 MBD3O95983 291 aa9.56□□□□□ -0.88
RTF1-205ENST00000558298 UQCRHP07919 91 aa9.56□□□□□ -0.88
RTF1-205ENST00000558298 SPDYE6P0CI01 402 aa9.56□□□□□ -0.88
RTF1-205ENST00000558298 GTF2F1P35269 517 aaKnown RBP eCLIP9.56□□□□□ -0.88
RTF1-205ENST00000558298 VEGFBP49765 207 aa9.56□□□□□ -0.88
RTF1-205ENST00000558298 SCARF1Q14162 830 aa9.56□□□□□ -0.88
RTF1-205ENST00000558298 NBPF9Q3BBW0 867 aa9.56□□□□□ -0.88
RTF1-205ENST00000558298 ANGEL2Q5VTE6 544 aaKnown RBP9.56□□□□□ -0.88
RTF1-205ENST00000558298 HHIPL2Q6UWX4 724 aa9.56□□□□□ -0.88
RTF1-205ENST00000558298 KRT26Q7Z3Y9 468 aa9.56□□□□□ -0.88
RTF1-205ENST00000558298 CLASRPQ8N2M8 674 aaKnown RBP9.56□□□□□ -0.88
RTF1-205ENST00000558298 FAM184AQ8NB25 1140 aa9.56□□□□□ -0.88
RTF1-205ENST00000558298 SYAP1Q96A49 352 aaPredicted RBP9.56□□□□□ -0.88
RTF1-205ENST00000558298 EAF2Q96CJ1 260 aaPredicted RBP9.56□□□□□ -0.88
RTF1-205ENST00000558298 FAM163AQ96GL9 167 aaPredicted RBP9.56□□□□□ -0.88
RTF1-205ENST00000558298 TSPYL1Q9H0U9 437 aa9.56□□□□□ -0.88
RTF1-205ENST00000558298 FAM13BQ9NYF5 915 aa9.56□□□□□ -0.88
RTF1-205ENST00000558298 DBNLQ9UJU6 430 aaKnown RBP9.56□□□□□ -0.88
RTF1-205ENST00000558298 EXOC6BQ9Y2D4 811 aa9.56□□□□□ -0.88
RTF1-205ENST00000558298 PCDHB15Q9Y5E8 787 aa9.56□□□□□ -0.88
RTF1-205ENST00000558298 PPP2R3BQ9Y5P8 575 aa9.56□□□□□ -0.88
RTF1-205ENST00000558298 GAKO14976 1311 aa9.56□□□□□ -0.88
RTF1-205ENST00000558298 AOX1Q06278 1338 aa9.56□□□□□ -0.88
RTF1-205ENST00000558298 MYO5AQ9Y4I1 1855 aaKnown RBP9.55□□□□□ -0.88
RTF1-205ENST00000558298 CELF2O95319 508 aaKnown RBP9.55□□□□□ -0.88
RTF1-205ENST00000558298 MAP4K4O95819 1239 aaPredicted RBP9.55□□□□□ -0.88
RTF1-205ENST00000558298 ADORA1P30542 326 aa9.55□□□□□ -0.88
RTF1-205ENST00000558298 TIMM10P62072 90 aa9.55□□□□□ -0.88
RTF1-205ENST00000558298 PDE4CQ08493 712 aa9.55□□□□□ -0.88
RTF1-205ENST00000558298 OS9Q13438 667 aaPredicted RBP9.55□□□□□ -0.88
RTF1-205ENST00000558298 DEFB115Q30KQ5 88 aa9.55□□□□□ -0.88
RTF1-205ENST00000558298 FKBP1CQ5VVH2 108 aa9.55□□□□□ -0.88
RTF1-205ENST00000558298 USP48Q86UV5 1035 aa9.55□□□□□ -0.88
RTF1-205ENST00000558298 KIAA0825Q8IV33 1275 aa9.55□□□□□ -0.88
RTF1-205ENST00000558298 GCC1Q96CN9 775 aa9.55□□□□□ -0.88
RTF1-205ENST00000558298 ZDHHC15Q96MV8 337 aa9.55□□□□□ -0.88
RTF1-205ENST00000558298 FEZ1Q99689 392 aa9.55□□□□□ -0.88
RTF1-205ENST00000558298 LRRCC1Q9C099 1032 aa9.55□□□□□ -0.88
RTF1-205ENST00000558298 OTOFQ9HC10 1997 aa9.55□□□□□ -0.88
RTF1-205ENST00000558298 CDK5RAP2Q96SN8 1893 aa9.55□□□□□ -0.88
RTF1-205ENST00000558298 COL2A1P02458 1487 aaPredicted RBP9.54□□□□□ -0.88
RTF1-205ENST00000558298 MCAMP43121 646 aa9.54□□□□□ -0.88
RTF1-205ENST00000558298 CHAF1AQ13111 956 aaPredicted RBP9.54□□□□□ -0.88
RTF1-205ENST00000558298 CCDC158Q5M9N0 1113 aa9.54□□□□□ -0.88
RTF1-205ENST00000558298 RBM26Q5T8P6 1007 aaKnown RBP9.54□□□□□ -0.88
RTF1-205ENST00000558298 SPTY2D1Q68D10 685 aaPredicted RBP9.54□□□□□ -0.88
RTF1-205ENST00000558298 POTEDQ86YR6 584 aa9.54□□□□□ -0.88
RTF1-205ENST00000558298 APOBEC3FQ8IUX4 373 aaKnown RBP9.54□□□□□ -0.88
RTF1-205ENST00000558298 SPATA5Q8NB90 893 aa9.54□□□□□ -0.88
RTF1-205ENST00000558298 TNPO1Q92973 898 aaKnown RBP9.54□□□□□ -0.88
RTF1-205ENST00000558298 DCPSQ96C86 337 aaKnown RBP9.54□□□□□ -0.88
RTF1-205ENST00000558298 CDCA5Q96FF9 252 aa9.54□□□□□ -0.88
RTF1-205ENST00000558298 DBNDD2Q9BQY9 259 aa9.54□□□□□ -0.88
RTF1-205ENST00000558298 HMG20BQ9P0W2 317 aa9.54□□□□□ -0.88
RTF1-205ENST00000558298 PCDHAC2Q9Y5I4 1007 aa9.54□□□□□ -0.88
RTF1-205ENST00000558298 WDR33Q9C0J8 1336 aaKnown RBP9.54□□□□□ -0.88
RTF1-205ENST00000558298 FAM155AB1AL88 458 aaPredicted RBP9.53□□□□□ -0.88
RTF1-205ENST00000558298 NPM3O75607 178 aaKnown RBP9.53□□□□□ -0.88
RTF1-205ENST00000558298 IGHDP01880 384 aa9.53□□□□□ -0.88
RTF1-205ENST00000558298 HSPA1AP0DMV8 641 aaKnown RBP9.53□□□□□ -0.88
RTF1-205ENST00000558298 HSPA1BP0DMV9 641 aaKnown RBP9.53□□□□□ -0.88
RTF1-205ENST00000558298 GRIK5Q16478 980 aa9.53□□□□□ -0.88
RTF1-205ENST00000558298 SPDYE2Q495Y8 402 aa9.53□□□□□ -0.88
RTF1-205ENST00000558298 TICAM2Q86XR7 235 aa9.53□□□□□ -0.88
RTF1-205ENST00000558298 CERS3Q8IU89 383 aa9.53□□□□□ -0.88
RTF1-205ENST00000558298 SULF1Q8IWU6 871 aa9.53□□□□□ -0.88
RTF1-205ENST00000558298 SLF2Q8IX21 1173 aa9.53□□□□□ -0.88
RTF1-205ENST00000558298 MYRIPQ8NFW9 859 aa9.53□□□□□ -0.88
RTF1-205ENST00000558298 TEKT1Q969V4 418 aa9.53□□□□□ -0.88
RTF1-205ENST00000558298 CAPNS2Q96L46 248 aa9.53□□□□□ -0.88
RTF1-205ENST00000558298 DIAPH3Q9NSV4 1193 aa9.53□□□□□ -0.88
RTF1-205ENST00000558298 WBP1LQ9NX94 342 aa9.53□□□□□ -0.88
RTF1-205ENST00000558298 ABT1Q9ULW3 272 aaKnown RBP9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms