RNA–Protein interactions for RNA: ENST00000558080.1

SPG11-205, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 1 (best)

Gene SPG11, Length 759 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-205ENST00000558080 CASP7P55210 303 aa9.58□□□□□ -0.88
SPG11-205ENST00000558080 TBC1D10BQ4KMP7 808 aaPredicted RBP9.58□□□□□ -0.88
SPG11-205ENST00000558080 GLIS2Q9BZE0 524 aaPredicted RBP9.58□□□□□ -0.88
SPG11-205ENST00000558080 BSDC1Q9NW68 430 aaPredicted RBP9.58□□□□□ -0.88
SPG11-205ENST00000558080 ABT1Q9ULW3 272 aaKnown RBP9.58□□□□□ -0.88
SPG11-205ENST00000558080 MINPP1Q9UNW1 487 aa9.58□□□□□ -0.88
SPG11-205ENST00000558080 RTL9Q8NET4 1388 aa9.58□□□□□ -0.88
SPG11-205ENST00000558080 ZNF521Q96K83 1311 aa9.57□□□□□ -0.88
SPG11-205ENST00000558080 ITGA6P23229 1130 aa9.57□□□□□ -0.88
SPG11-205ENST00000558080 IGHMBP2P38935 993 aaKnown RBP9.57□□□□□ -0.88
SPG11-205ENST00000558080 DEFB115Q30KQ5 88 aa9.57□□□□□ -0.88
SPG11-205ENST00000558080 BEND3Q5T5X7 828 aa9.57□□□□□ -0.88
SPG11-205ENST00000558080 BRICD5Q6PL45 260 aa9.57□□□□□ -0.88
SPG11-205ENST00000558080 SLC4A10Q6U841 1118 aa9.57□□□□□ -0.88
SPG11-205ENST00000558080 NLRP7Q8WX94 980 aa9.57□□□□□ -0.88
SPG11-205ENST00000558080 DPF2Q92785 391 aa9.57□□□□□ -0.88
SPG11-205ENST00000558080 PHOX2BQ99453 314 aa9.57□□□□□ -0.88
SPG11-205ENST00000558080 PLA2G12BQ9BX93 195 aa9.57□□□□□ -0.88
SPG11-205ENST00000558080 AKAP11Q9UKA4 1901 aa9.56□□□□□ -0.88
SPG11-205ENST00000558080 CASP8AP2Q9UKL3 1982 aa9.56□□□□□ -0.88
SPG11-205ENST00000558080 EGFRP00533 1210 aa9.56□□□□□ -0.88
SPG11-205ENST00000558080 CSF1RP07333 972 aa9.56□□□□□ -0.88
SPG11-205ENST00000558080 VIL1P09327 827 aaKnown RBP9.56□□□□□ -0.88
SPG11-205ENST00000558080 CCT4P50991 539 aaKnown RBP9.56□□□□□ -0.88
SPG11-205ENST00000558080 MSS51Q4VC12 460 aa9.56□□□□□ -0.88
SPG11-205ENST00000558080 COL13A1Q5TAT6 717 aaPredicted RBP9.56□□□□□ -0.88
SPG11-205ENST00000558080 CST9Q5W186 159 aa9.56□□□□□ -0.88
SPG11-205ENST00000558080 USP48Q86UV5 1035 aa9.56□□□□□ -0.88
SPG11-205ENST00000558080 MPHOSPH8Q99549 860 aa9.56□□□□□ -0.88
SPG11-205ENST00000558080 PGAP2Q9UHJ9 254 aa9.56□□□□□ -0.88
SPG11-205ENST00000558080 CHMP3Q9Y3E7 222 aa9.56□□□□□ -0.88
SPG11-205ENST00000558080 ECM29Q5VYK3 1845 aa9.55□□□□□ -0.88
SPG11-205ENST00000558080 ANKRD18BA2A2Z9 1011 aa9.55□□□□□ -0.88
SPG11-205ENST00000558080 RASSF10A6NK89 507 aa9.55□□□□□ -0.88
SPG11-205ENST00000558080 CELF2O95319 508 aaKnown RBP9.55□□□□□ -0.88
SPG11-205ENST00000558080 RPS12P25398 132 aaKnown RBP9.55□□□□□ -0.88
SPG11-205ENST00000558080 FOXO4P98177 505 aa9.55□□□□□ -0.88
SPG11-205ENST00000558080 GRM1Q13255 1194 aa9.55□□□□□ -0.88
SPG11-205ENST00000558080 LCE2AQ5TA79 106 aaPredicted RBP9.55□□□□□ -0.88
SPG11-205ENST00000558080 DLK2Q6UY11 383 aa9.55□□□□□ -0.88
SPG11-205ENST00000558080 TXNRD3Q86VQ6 643 aa9.55□□□□□ -0.88
SPG11-205ENST00000558080 ZC3H15Q8WU90 426 aaKnown RBP9.55□□□□□ -0.88
SPG11-205ENST00000558080 ZNF408Q9H9D4 720 aa9.55□□□□□ -0.88
SPG11-205ENST00000558080 PRDM9Q9NQV7 894 aa9.55□□□□□ -0.88
SPG11-205ENST00000558080 C9orf78Q9NZ63 289 aaPredicted RBP9.55□□□□□ -0.88
SPG11-205ENST00000558080 WDR33Q9C0J8 1336 aaKnown RBP9.55□□□□□ -0.88
SPG11-205ENST00000558080 MYH13Q9UKX3 1938 aa9.54□□□□□ -0.88
SPG11-205ENST00000558080 MED23Q9ULK4 1368 aa9.54□□□□□ -0.88
SPG11-205ENST00000558080 USP17L3A6NCW0 530 aa9.54□□□□□ -0.88
SPG11-205ENST00000558080 USP17L4A6NCW7 530 aa9.54□□□□□ -0.88
SPG11-205ENST00000558080 E9PSI1 815 aa9.54□□□□□ -0.88
SPG11-205ENST00000558080 GRM8O00222 908 aa9.54□□□□□ -0.88
SPG11-205ENST00000558080 SLFN5Q08AF3 891 aa9.54□□□□□ -0.88
SPG11-205ENST00000558080 KIF4BQ2VIQ3 1234 aa9.54□□□□□ -0.88
SPG11-205ENST00000558080 EPHA10Q5JZY3 1008 aa9.54□□□□□ -0.88
SPG11-205ENST00000558080 RSBN1LQ6PCB5 846 aaPredicted RBP9.54□□□□□ -0.88
SPG11-205ENST00000558080 LMBR1LQ6UX01 489 aa9.54□□□□□ -0.88
SPG11-205ENST00000558080 TREML4Q6UXN2 200 aa9.54□□□□□ -0.88
SPG11-205ENST00000558080 CDC37L1Q7L3B6 337 aa9.54□□□□□ -0.88
SPG11-205ENST00000558080 USP17L1Q7RTZ2 530 aa9.54□□□□□ -0.88
SPG11-205ENST00000558080 CYP4X1Q8N118 509 aa9.54□□□□□ -0.88
SPG11-205ENST00000558080 HELBQ8NG08 1087 aaPredicted RBP9.54□□□□□ -0.88
SPG11-205ENST00000558080 SRCIN1Q9C0H9 1055 aa9.54□□□□□ -0.88
SPG11-205ENST00000558080 ANKRD2Q9GZV1 360 aa9.54□□□□□ -0.88
SPG11-205ENST00000558080 LEMD3Q9Y2U8 911 aa9.54□□□□□ -0.88
SPG11-205ENST00000558080 ZNF804BA4D1E1 1349 aa9.54□□□□□ -0.88
SPG11-205ENST00000558080 ASTN2O75129 1339 aaPredicted RBP9.54□□□□□ -0.88
SPG11-205ENST00000558080 FOXN1O15353 648 aa9.53□□□□□ -0.88
SPG11-205ENST00000558080 TAF5LO75529 589 aa9.53□□□□□ -0.88
SPG11-205ENST00000558080 ALDH1L1O75891 902 aa9.53□□□□□ -0.88
SPG11-205ENST00000558080 KLRK1P26718 216 aa9.53□□□□□ -0.88
SPG11-205ENST00000558080 KCNJ4P48050 445 aa9.53□□□□□ -0.88
SPG11-205ENST00000558080 CHRNDQ07001 517 aa9.53□□□□□ -0.88
SPG11-205ENST00000558080 IFIT5Q13325 482 aaKnown RBP9.53□□□□□ -0.88
SPG11-205ENST00000558080 CTC1Q2NKJ3 1217 aa9.53□□□□□ -0.88
SPG11-205ENST00000558080 CYP4F22Q6NT55 531 aa9.53□□□□□ -0.88
SPG11-205ENST00000558080 KRT26Q7Z3Y9 468 aa9.53□□□□□ -0.88
SPG11-205ENST00000558080 PODNQ7Z5L7 613 aa9.53□□□□□ -0.88
SPG11-205ENST00000558080 AGBL3Q8NEM8 1001 aa9.53□□□□□ -0.88
SPG11-205ENST00000558080 AIDAQ96BJ3 306 aa9.53□□□□□ -0.88
SPG11-205ENST00000558080 DCPSQ96C86 337 aaKnown RBP9.53□□□□□ -0.88
SPG11-205ENST00000558080 ZNF594Q96JF6 807 aaPredicted RBP9.53□□□□□ -0.88
SPG11-205ENST00000558080 CAPNS2Q96L46 248 aa9.53□□□□□ -0.88
SPG11-205ENST00000558080 MXD3Q9BW11 206 aa9.53□□□□□ -0.88
SPG11-205ENST00000558080 TLL2Q9Y6L7 1015 aa9.53□□□□□ -0.88
SPG11-205ENST00000558080 ADM5C9JUS6 153 aa9.52□□□□□ -0.89
SPG11-205ENST00000558080 SNAP23O00161 211 aa9.52□□□□□ -0.89
SPG11-205ENST00000558080 PLIN1O60240 522 aa9.52□□□□□ -0.89
SPG11-205ENST00000558080 USP17L8P0C7I0 530 aa9.52□□□□□ -0.89
SPG11-205ENST00000558080 SMCPP49901 116 aaPredicted RBP9.52□□□□□ -0.89
SPG11-205ENST00000558080 CCDC57Q2TAC2 916 aa9.52□□□□□ -0.89
SPG11-205ENST00000558080 TAF7LQ5H9L4 462 aa9.52□□□□□ -0.89
SPG11-205ENST00000558080 RNF19BQ6ZMZ0 732 aa9.52□□□□□ -0.89
SPG11-205ENST00000558080 SSH1Q8WYL5 1049 aa9.52□□□□□ -0.89
SPG11-205ENST00000558080 SUCLG2Q96I99 432 aa9.52□□□□□ -0.89
SPG11-205ENST00000558080 GMLQ99445 158 aa9.52□□□□□ -0.89
SPG11-205ENST00000558080 COA1Q9GZY4 146 aa9.52□□□□□ -0.89
SPG11-205ENST00000558080 THSD7BQ9C0I4 1608 aa9.52□□□□□ -0.89
SPG11-205ENST00000558080 AXIN1O15169 862 aa9.51□□□□□ -0.89
SPG11-205ENST00000558080 AOC2O75106 756 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms