RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 AMOTL1Q8IY63 956 aa14.83□□□□□ -0.04
TPM1-209ENST00000558072 GPC2Q8N158 579 aa14.83□□□□□ -0.04
TPM1-209ENST00000558072 STRBPQ96SI9 672 aaKnown RBP14.83□□□□□ -0.04
TPM1-209ENST00000558072 ATP8A2Q9NTI2 1148 aa14.83□□□□□ -0.04
TPM1-209ENST00000558072 GAKO14976 1311 aa14.83□□□□□ -0.04
TPM1-209ENST00000558072 ZKSCAN1P17029 563 aaPredicted RBP14.82□□□□□ -0.04
TPM1-209ENST00000558072 EPS15P42566 896 aa14.82□□□□□ -0.04
TPM1-209ENST00000558072 NT5C2P49902 561 aa14.82□□□□□ -0.04
TPM1-209ENST00000558072 ALX1Q15699 326 aa14.82□□□□□ -0.04
TPM1-209ENST00000558072 MICALL2Q8IY33 904 aa14.82□□□□□ -0.04
TPM1-209ENST00000558072 TRPM4Q8TD43 1214 aa14.82□□□□□ -0.04
TPM1-209ENST00000558072 MAP4K1Q92918 833 aa14.82□□□□□ -0.04
TPM1-209ENST00000558072 ZDHHC15Q96MV8 337 aa14.82□□□□□ -0.04
TPM1-209ENST00000558072 USP26Q9BXU7 913 aa14.82□□□□□ -0.04
TPM1-209ENST00000558072 PUS7LQ9H0K6 701 aaKnown RBP14.82□□□□□ -0.04
TPM1-209ENST00000558072 TAOK2Q9UL54 1235 aa14.82□□□□□ -0.04
TPM1-209ENST00000558072 SCAF8Q9UPN6 1271 aaKnown RBP14.82□□□□□ -0.04
TPM1-209ENST00000558072 WDR90Q96KV7 1748 aa14.82□□□□□ -0.04
TPM1-209ENST00000558072 ASTN2O75129 1339 aaPredicted RBP14.82□□□□□ -0.04
TPM1-209ENST00000558072 H7C1D1 291 aa14.81□□□□□ -0.04
TPM1-209ENST00000558072 MYO1BO43795 1136 aa14.81□□□□□ -0.04
TPM1-209ENST00000558072 MBD4O95243 580 aa14.81□□□□□ -0.04
TPM1-209ENST00000558072 APPP05067 770 aa14.81□□□□□ -0.04
TPM1-209ENST00000558072 CRKP46108 304 aa14.81□□□□□ -0.04
TPM1-209ENST00000558072 ANAPC15P60006 121 aa14.81□□□□□ -0.04
TPM1-209ENST00000558072 RBM26Q5T8P6 1007 aaKnown RBP14.81□□□□□ -0.04
TPM1-209ENST00000558072 SAMD7Q7Z3H4 446 aa14.81□□□□□ -0.04
TPM1-209ENST00000558072 MTMR14Q8NCE2 650 aa14.81□□□□□ -0.04
TPM1-209ENST00000558072 SEC62Q99442 399 aaKnown RBP14.81□□□□□ -0.04
TPM1-209ENST00000558072 C22orf23Q9BZE7 217 aa14.81□□□□□ -0.04
TPM1-209ENST00000558072 IL25Q9H293 177 aa14.81□□□□□ -0.04
TPM1-209ENST00000558072 TMOD2Q9NZR1 351 aa14.81□□□□□ -0.04
TPM1-209ENST00000558072 ZMYM6O95789 1325 aa14.81□□□□□ -0.04
TPM1-209ENST00000558072 POTECB2RU33 542 aa14.8□□□□□ -0.04
TPM1-209ENST00000558072 HSPD1P10809 573 aaKnown RBP14.8□□□□□ -0.04
TPM1-209ENST00000558072 BTDP43251 543 aa14.8□□□□□ -0.04
TPM1-209ENST00000558072 RBM5P52756 815 aaKnown RBP eCLIP14.8□□□□□ -0.04
TPM1-209ENST00000558072 DYNLL1P63167 89 aaKnown RBP14.8□□□□□ -0.04
TPM1-209ENST00000558072 KRT32Q14532 448 aa14.8□□□□□ -0.04
TPM1-209ENST00000558072 DLGAP5Q15398 846 aa14.8□□□□□ -0.04
TPM1-209ENST00000558072 TBC1D10BQ4KMP7 808 aaPredicted RBP14.8□□□□□ -0.04
TPM1-209ENST00000558072 CCDC129Q6ZRS4 1044 aa14.8□□□□□ -0.04
TPM1-209ENST00000558072 MIGA1Q8NAN2 632 aa14.8□□□□□ -0.04
TPM1-209ENST00000558072 RIOK1Q9BRS2 568 aaKnown RBP14.8□□□□□ -0.04
TPM1-209ENST00000558072 LSG1Q9H089 658 aaKnown RBP14.8□□□□□ -0.04
TPM1-209ENST00000558072 NMRK2Q9NPI5 230 aa14.8□□□□□ -0.04
TPM1-209ENST00000558072 SLC4A4Q9Y6R1 1079 aa14.8□□□□□ -0.04
TPM1-209ENST00000558072 GLTPD2A6NH11 291 aa14.79□□□□□ -0.04
TPM1-209ENST00000558072 M0R2C6 588 aa14.79□□□□□ -0.04
TPM1-209ENST00000558072 NPM3O75607 178 aaKnown RBP14.79□□□□□ -0.04
TPM1-209ENST00000558072 SLC3A2P08195 630 aaKnown RBP14.79□□□□□ -0.04
TPM1-209ENST00000558072 LMOD1P29536 600 aaPredicted RBP14.79□□□□□ -0.04
TPM1-209ENST00000558072 RBM25P49756 843 aaKnown RBP14.79□□□□□ -0.04
TPM1-209ENST00000558072 IMMTQ16891 758 aaKnown RBP14.79□□□□□ -0.04
TPM1-209ENST00000558072 ECM29Q5VYK3 1845 aa14.79□□□□□ -0.04
TPM1-209ENST00000558072 CDK5RAP2Q96SN8 1893 aa14.79□□□□□ -0.04
TPM1-209ENST00000558072 NAPBQ9H115 298 aa14.79□□□□□ -0.04
TPM1-209ENST00000558072 AATFQ9NY61 560 aaKnown RBP eCLIP14.79□□□□□ -0.04
TPM1-209ENST00000558072 GPRC5DQ9NZD1 345 aa14.79□□□□□ -0.04
TPM1-209ENST00000558072 CNOT7Q9UIV1 285 aaKnown RBP14.79□□□□□ -0.04
TPM1-209ENST00000558072 DAGLAQ9Y4D2 1042 aa14.79□□□□□ -0.04
TPM1-209ENST00000558072 POTEIP0CG38 1075 aa14.78□□□□□ -0.04
TPM1-209ENST00000558072 POTEJP0CG39 1038 aa14.78□□□□□ -0.04
TPM1-209ENST00000558072 PCP11498 1178 aaKnown RBP14.78□□□□□ -0.04
TPM1-209ENST00000558072 USP5P45974 858 aa14.78□□□□□ -0.04
TPM1-209ENST00000558072 TDO2P48775 406 aa14.78□□□□□ -0.04
TPM1-209ENST00000558072 CACNB3P54284 484 aa14.78□□□□□ -0.04
TPM1-209ENST00000558072 ZNF280AP59817 542 aaPredicted RBP14.78□□□□□ -0.04
TPM1-209ENST00000558072 CFAP100Q494V2 611 aa14.78□□□□□ -0.04
TPM1-209ENST00000558072 ZNF589Q86UQ0 364 aaPredicted RBP14.78□□□□□ -0.04
TPM1-209ENST00000558072 TEX11Q8IYF3 940 aa14.78□□□□□ -0.04
TPM1-209ENST00000558072 ARMT1Q9H993 441 aa14.78□□□□□ -0.04
TPM1-209ENST00000558072 CLRN2A0PK11 232 aa14.77□□□□□ -0.05
TPM1-209ENST00000558072 ZNF213O14771 459 aa14.77□□□□□ -0.05
TPM1-209ENST00000558072 PSMA5P28066 241 aa14.77□□□□□ -0.05
TPM1-209ENST00000558072 HSPA4P34932 840 aa14.77□□□□□ -0.05
TPM1-209ENST00000558072 FKBP1CQ5VVH2 108 aa14.77□□□□□ -0.05
TPM1-209ENST00000558072 LCORLQ8N3X6 602 aa14.77□□□□□ -0.05
TPM1-209ENST00000558072 TBC1D32Q96NH3 1257 aa14.77□□□□□ -0.05
TPM1-209ENST00000558072 RRAGCQ9HB90 399 aa14.77□□□□□ -0.05
TPM1-209ENST00000558072 ZNF287Q9HBT7 754 aa14.77□□□□□ -0.05
TPM1-209ENST00000558072 USP40Q9NVE5 1235 aa14.77□□□□□ -0.05
TPM1-209ENST00000558072 ARPP21Q9UBL0 812 aaPredicted RBP14.77□□□□□ -0.05
TPM1-209ENST00000558072 RBM8AQ9Y5S9 174 aaKnown RBP14.77□□□□□ -0.05
TPM1-209ENST00000558072 SEC24BO95487 1268 aa14.76□□□□□ -0.05
TPM1-209ENST00000558072 HMGB1P09429 215 aaKnown RBP14.76□□□□□ -0.05
TPM1-209ENST00000558072 HIRAP54198 1017 aaPredicted RBP14.76□□□□□ -0.05
TPM1-209ENST00000558072 TNFAIP1Q13829 316 aa14.76□□□□□ -0.05
TPM1-209ENST00000558072 KIF4BQ2VIQ3 1234 aa14.76□□□□□ -0.05
TPM1-209ENST00000558072 NBPF9Q3BBW0 867 aa14.76□□□□□ -0.05
TPM1-209ENST00000558072 TSGA10IPQ3SY00 556 aa14.76□□□□□ -0.05
TPM1-209ENST00000558072 DLK2Q6UY11 383 aa14.76□□□□□ -0.05
TPM1-209ENST00000558072 IFNL3Q8IZI9 196 aa14.76□□□□□ -0.05
TPM1-209ENST00000558072 RNF41Q9H4P4 317 aaPredicted RBP14.76□□□□□ -0.05
TPM1-209ENST00000558072 MYOZ2Q9NPC6 264 aa14.76□□□□□ -0.05
TPM1-209ENST00000558072 SCN4AP35499 1836 aa14.76□□□□□ -0.05
TPM1-209ENST00000558072 IQCA1LA6NCM1 817 aa14.75□□□□□ -0.05
TPM1-209ENST00000558072 SPDYE2BA6NHP3 402 aa14.75□□□□□ -0.05
TPM1-209ENST00000558072 GSG1L2A8MUP6 293 aa14.75□□□□□ -0.05
TPM1-209ENST00000558072 FGAP02671 866 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 131.5 ms