RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 RESP18Q5W5W9 173 aa13.61□□□□□ -0.23
VIPAS39-211ENST00000557658 CPLX2Q6PUV4 134 aaKnown RBP13.61□□□□□ -0.23
VIPAS39-211ENST00000557658 MPHOSPH8Q99549 860 aa13.61□□□□□ -0.23
VIPAS39-211ENST00000557658 PARP3Q9Y6F1 533 aa13.61□□□□□ -0.23
VIPAS39-211ENST00000557658 MYH7P12883 1935 aa13.6□□□□□ -0.23
VIPAS39-211ENST00000557658 NBPF26B4DH59 902 aa13.6□□□□□ -0.23
VIPAS39-211ENST00000557658 CSB-PGBD3P0DP91 1061 aa13.6□□□□□ -0.23
VIPAS39-211ENST00000557658 PTPAQ15257 358 aa13.6□□□□□ -0.23
VIPAS39-211ENST00000557658 TEX35Q5T0J7 233 aa13.6□□□□□ -0.23
VIPAS39-211ENST00000557658 NBPF14Q5TI25 921 aa13.6□□□□□ -0.23
VIPAS39-211ENST00000557658 CCDC102BQ68D86 513 aa13.6□□□□□ -0.23
VIPAS39-211ENST00000557658 KRT40Q6A162 431 aa13.6□□□□□ -0.23
VIPAS39-211ENST00000557658 NBPF10Q6P3W6 841 aaKnown RBP13.6□□□□□ -0.23
VIPAS39-211ENST00000557658 TTLL7Q6ZT98 887 aa13.6□□□□□ -0.23
VIPAS39-211ENST00000557658 NBPF15Q8N660 670 aa13.6□□□□□ -0.23
VIPAS39-211ENST00000557658 PPP2R2CQ9Y2T4 447 aa13.6□□□□□ -0.23
VIPAS39-211ENST00000557658 PLEKHG2Q9H7P9 1386 aa13.6□□□□□ -0.23
VIPAS39-211ENST00000557658 CUTAO60888 179 aa13.6□□□□□ -0.23
VIPAS39-211ENST00000557658 METAP2P50579 478 aaKnown RBP eCLIP13.6□□□□□ -0.23
VIPAS39-211ENST00000557658 XAGE2Q96GT9 111 aa13.6□□□□□ -0.23
VIPAS39-211ENST00000557658 FANCLQ9NW38 375 aa13.6□□□□□ -0.23
VIPAS39-211ENST00000557658 ANGEL1Q9UNK9 670 aaKnown RBP13.6□□□□□ -0.23
VIPAS39-211ENST00000557658 GLI3P10071 1580 aa13.59□□□□□ -0.23
VIPAS39-211ENST00000557658 TMEM232C9JQI7 657 aa13.59□□□□□ -0.23
VIPAS39-211ENST00000557658 GPAA1O43292 621 aa13.59□□□□□ -0.23
VIPAS39-211ENST00000557658 CNNM3Q8NE01 707 aa13.59□□□□□ -0.23
VIPAS39-211ENST00000557658 PUS7LQ9H0K6 701 aaKnown RBP13.59□□□□□ -0.23
VIPAS39-211ENST00000557658 C19orf44Q9H6X5 657 aa13.59□□□□□ -0.23
VIPAS39-211ENST00000557658 ABCC12Q96J65 1359 aa13.59□□□□□ -0.23
VIPAS39-211ENST00000557658 VWA3AA6NCI4 1184 aa13.59□□□□□ -0.23
VIPAS39-211ENST00000557658 ADORA1P30542 326 aa13.59□□□□□ -0.23
VIPAS39-211ENST00000557658 CASQ1P31415 396 aa13.59□□□□□ -0.23
VIPAS39-211ENST00000557658 TRIM29Q14134 588 aa13.59□□□□□ -0.23
VIPAS39-211ENST00000557658 CCDC57Q2TAC2 916 aa13.59□□□□□ -0.23
VIPAS39-211ENST00000557658 KRBA2Q6ZNG9 492 aa13.59□□□□□ -0.23
VIPAS39-211ENST00000557658 METTL16Q86W50 562 aaKnown RBP13.59□□□□□ -0.23
VIPAS39-211ENST00000557658 TMEM139Q8IV31 216 aa13.59□□□□□ -0.23
VIPAS39-211ENST00000557658 AIFM3Q96NN9 605 aa13.59□□□□□ -0.23
VIPAS39-211ENST00000557658 MAP3K14Q99558 947 aa13.59□□□□□ -0.23
VIPAS39-211ENST00000557658 FBXO3Q9UK99 471 aa13.59□□□□□ -0.23
VIPAS39-211ENST00000557658 FANCGO15287 622 aa13.58□□□□□ -0.24
VIPAS39-211ENST00000557658 GOLGA8FQ08AF8 430 aa13.58□□□□□ -0.24
VIPAS39-211ENST00000557658 GOLGA8DPQ0D2H9 430 aa13.58□□□□□ -0.24
VIPAS39-211ENST00000557658 HSP90AB3PQ58FF7 597 aa13.58□□□□□ -0.24
VIPAS39-211ENST00000557658 BAG1Q99933 345 aaPredicted RBP13.58□□□□□ -0.24
VIPAS39-211ENST00000557658 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.58□□□□□ -0.24
VIPAS39-211ENST00000557658 HOOK1Q9UJC3 728 aaKnown RBP13.58□□□□□ -0.24
VIPAS39-211ENST00000557658 KCNH3Q9ULD8 1083 aa13.58□□□□□ -0.24
VIPAS39-211ENST00000557658 MST1RQ04912 1400 aa13.58□□□□□ -0.24
VIPAS39-211ENST00000557658 PKD1L3Q7Z443 1732 aa13.58□□□□□ -0.24
VIPAS39-211ENST00000557658 ZAP70P43403 619 aa13.58□□□□□ -0.24
VIPAS39-211ENST00000557658 CLIC6Q96NY7 704 aa13.58□□□□□ -0.24
VIPAS39-211ENST00000557658 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.58□□□□□ -0.24
VIPAS39-211ENST00000557658 ZBTB3Q9H5J0 574 aa13.58□□□□□ -0.24
VIPAS39-211ENST00000557658 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.58□□□□□ -0.24
VIPAS39-211ENST00000557658 PCDHA5Q9Y5H7 936 aa13.58□□□□□ -0.24
VIPAS39-211ENST00000557658 A0A0U1RQG5 324 aaPredicted RBP13.57□□□□□ -0.24
VIPAS39-211ENST00000557658 STX10O60499 249 aa13.57□□□□□ -0.24
VIPAS39-211ENST00000557658 GNG11P61952 73 aa13.57□□□□□ -0.24
VIPAS39-211ENST00000557658 TBX2Q13207 712 aaPredicted RBP13.57□□□□□ -0.24
VIPAS39-211ENST00000557658 LONRF3Q496Y0 759 aa13.57□□□□□ -0.24
VIPAS39-211ENST00000557658 ELOA2Q8IYF1 753 aaPredicted RBP13.57□□□□□ -0.24
VIPAS39-211ENST00000557658 FAM177A1Q8N128 213 aaPredicted RBP13.57□□□□□ -0.24
VIPAS39-211ENST00000557658 GPR161Q8N6U8 529 aaKnown RBP13.57□□□□□ -0.24
VIPAS39-211ENST00000557658 SH2B2O14492 632 aaPredicted RBP13.57□□□□□ -0.24
VIPAS39-211ENST00000557658 MAP3K9P80192 1104 aa13.57□□□□□ -0.24
VIPAS39-211ENST00000557658 SCARF1Q14162 830 aa13.57□□□□□ -0.24
VIPAS39-211ENST00000557658 PDILTQ8N807 584 aa13.57□□□□□ -0.24
VIPAS39-211ENST00000557658 INTS13Q9NVM9 706 aa13.57□□□□□ -0.24
VIPAS39-211ENST00000557658 ALS2Q96Q42 1657 aa13.56□□□□□ -0.24
VIPAS39-211ENST00000557658 SEC31AO94979 1220 aaKnown RBP13.56□□□□□ -0.24
VIPAS39-211ENST00000557658 IARSP41252 1262 aaKnown RBP13.56□□□□□ -0.24
VIPAS39-211ENST00000557658 APOA5Q6Q788 366 aa13.56□□□□□ -0.24
VIPAS39-211ENST00000557658 DACH1Q9UI36 760 aa13.56□□□□□ -0.24
VIPAS39-211ENST00000557658 ECM29Q5VYK3 1845 aa13.56□□□□□ -0.24
VIPAS39-211ENST00000557658 CDK11BP21127 795 aaKnown RBP13.56□□□□□ -0.24
VIPAS39-211ENST00000557658 CC2D1AQ6P1N0 951 aaPredicted RBP13.56□□□□□ -0.24
VIPAS39-211ENST00000557658 FOXP4Q8IVH2 680 aaPredicted RBP13.56□□□□□ -0.24
VIPAS39-211ENST00000557658 KRI1Q8N9T8 703 aaKnown RBP13.56□□□□□ -0.24
VIPAS39-211ENST00000557658 PHKBQ93100 1093 aa13.56□□□□□ -0.24
VIPAS39-211ENST00000557658 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.56□□□□□ -0.24
VIPAS39-211ENST00000557658 TAOK2Q9UL54 1235 aa13.56□□□□□ -0.24
VIPAS39-211ENST00000557658 POLR3GO15318 223 aaPredicted RBP13.55□□□□□ -0.24
VIPAS39-211ENST00000557658 ZBTB43O43298 467 aa13.55□□□□□ -0.24
VIPAS39-211ENST00000557658 PPP2R3AQ06190 1150 aa13.55□□□□□ -0.24
VIPAS39-211ENST00000557658 PDE4BQ07343 736 aa13.55□□□□□ -0.24
VIPAS39-211ENST00000557658 PTPN21Q16825 1174 aa13.55□□□□□ -0.24
VIPAS39-211ENST00000557658 TAF7LQ5H9L4 462 aa13.55□□□□□ -0.24
VIPAS39-211ENST00000557658 SPECC1LQ69YQ0 1117 aa13.55□□□□□ -0.24
VIPAS39-211ENST00000557658 CYB5R4Q7L1T6 521 aa13.55□□□□□ -0.24
VIPAS39-211ENST00000557658 UBXN6Q9BZV1 441 aa13.55□□□□□ -0.24
VIPAS39-211ENST00000557658 NBPF3Q9H094 633 aa13.55□□□□□ -0.24
VIPAS39-211ENST00000557658 MRFAP1Q9Y605 127 aa13.55□□□□□ -0.24
VIPAS39-211ENST00000557658 MAP3K15Q6ZN16 1313 aa13.55□□□□□ -0.24
VIPAS39-211ENST00000557658 COL18A1P39060 1754 aa13.55□□□□□ -0.24
VIPAS39-211ENST00000557658 TBC1D8O95759 1140 aa13.55□□□□□ -0.24
VIPAS39-211ENST00000557658 A1BGP04217 495 aa13.55□□□□□ -0.24
VIPAS39-211ENST00000557658 RXRAP19793 462 aa13.55□□□□□ -0.24
VIPAS39-211ENST00000557658 CDC27P30260 824 aa13.55□□□□□ -0.24
VIPAS39-211ENST00000557658 MICU3Q86XE3 530 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms