RNA–Protein interactions for RNA: ENST00000557624.1

RIPK3-206, Transcript of receptor interacting serine/threonine kinase 3, humanhuman

TSL 1 (best)

Gene RIPK3, Length 1,629 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK3-206ENST00000557624 MMP14P50281 582 aa17.02■□□□□ 0.31
RIPK3-206ENST00000557624 APOBEC3HQ6NTF7 200 aaKnown RBP17.02■□□□□ 0.31
RIPK3-206ENST00000557624 CCDC129Q6ZRS4 1044 aa17.02■□□□□ 0.31
RIPK3-206ENST00000557624 RUFY2Q8WXA3 655 aa17.02■□□□□ 0.31
RIPK3-206ENST00000557624 ARMT1Q9H993 441 aa17.02■□□□□ 0.31
RIPK3-206ENST00000557624 HELLSQ9NRZ9 838 aa17.02■□□□□ 0.31
RIPK3-206ENST00000557624 HACL1Q9UJ83 578 aa17.02■□□□□ 0.31
RIPK3-206ENST00000557624 WDR90Q96KV7 1748 aa17.02■□□□□ 0.31
RIPK3-206ENST00000557624 SPDYE2BA6NHP3 402 aa17.01■□□□□ 0.31
RIPK3-206ENST00000557624 SPDYE6P0CI01 402 aa17.01■□□□□ 0.31
RIPK3-206ENST00000557624 MCMDC2Q4G0Z9 681 aa17.01■□□□□ 0.31
RIPK3-206ENST00000557624 LCORLQ8N3X6 602 aa17.01■□□□□ 0.31
RIPK3-206ENST00000557624 TRPM4Q8TD43 1214 aa17.01■□□□□ 0.31
RIPK3-206ENST00000557624 PRMT6Q96LA8 375 aaPredicted RBP17.01■□□□□ 0.31
RIPK3-206ENST00000557624 IL25Q9H293 177 aa17.01■□□□□ 0.31
RIPK3-206ENST00000557624 SCN4AP35499 1836 aa17.01■□□□□ 0.31
RIPK3-206ENST00000557624 IQCA1LA6NCM1 817 aa17■□□□□ 0.31
RIPK3-206ENST00000557624 GPAA1O43292 621 aa17■□□□□ 0.31
RIPK3-206ENST00000557624 NBPF9Q3BBW0 867 aa17■□□□□ 0.31
RIPK3-206ENST00000557624 ZNF589Q86UQ0 364 aaPredicted RBP17■□□□□ 0.31
RIPK3-206ENST00000557624 RIOK1Q9BRS2 568 aaKnown RBP17■□□□□ 0.31
RIPK3-206ENST00000557624 ADARB2Q9NS39 739 aaKnown RBP17■□□□□ 0.31
RIPK3-206ENST00000557624 WNT10BO00744 389 aa16.99■□□□□ 0.31
RIPK3-206ENST00000557624 EPHX2P34913 555 aa16.99■□□□□ 0.31
RIPK3-206ENST00000557624 CDC42EP5Q6NZY7 148 aa16.99■□□□□ 0.31
RIPK3-206ENST00000557624 MTMR14Q8NCE2 650 aa16.99■□□□□ 0.31
RIPK3-206ENST00000557624 SH3RF3Q8TEJ3 882 aaPredicted RBP16.99■□□□□ 0.31
RIPK3-206ENST00000557624 ESYT1Q9BSJ8 1104 aa16.99■□□□□ 0.31
RIPK3-206ENST00000557624 TDRD3Q9H7E2 651 aaKnown RBP16.99■□□□□ 0.31
RIPK3-206ENST00000557624 USP40Q9NVE5 1235 aa16.99■□□□□ 0.31
RIPK3-206ENST00000557624 CCDC171Q6TFL3 1326 aa16.99■□□□□ 0.31
RIPK3-206ENST00000557624 RAD50Q92878 1312 aa16.99■□□□□ 0.31
RIPK3-206ENST00000557624 CLRN2A0PK11 232 aa16.99■□□□□ 0.31
RIPK3-206ENST00000557624 MYO1BO43795 1136 aa16.99■□□□□ 0.31
RIPK3-206ENST00000557624 PLCG2P16885 1265 aa16.99■□□□□ 0.31
RIPK3-206ENST00000557624 PPP4CP60510 307 aa16.99■□□□□ 0.31
RIPK3-206ENST00000557624 ZBED3Q96IU2 234 aaPredicted RBP16.99■□□□□ 0.31
RIPK3-206ENST00000557624 ECM29Q5VYK3 1845 aa16.98■□□□□ 0.31
RIPK3-206ENST00000557624 POTECB2RU33 542 aa16.98■□□□□ 0.31
RIPK3-206ENST00000557624 SGSM2O43147 1006 aa16.98■□□□□ 0.31
RIPK3-206ENST00000557624 CACNB3P54284 484 aa16.98■□□□□ 0.31
RIPK3-206ENST00000557624 RHBDL3P58872 404 aa16.98■□□□□ 0.31
RIPK3-206ENST00000557624 TEX11Q8IYF3 940 aa16.98■□□□□ 0.31
RIPK3-206ENST00000557624 STRBPQ96SI9 672 aaKnown RBP16.98■□□□□ 0.31
RIPK3-206ENST00000557624 TAF1DQ9H5J8 278 aaPredicted RBP16.98■□□□□ 0.31
RIPK3-206ENST00000557624 RRAGCQ9HB90 399 aa16.98■□□□□ 0.31
RIPK3-206ENST00000557624 NMRK2Q9NPI5 230 aa16.98■□□□□ 0.31
RIPK3-206ENST00000557624 ASTN2O75129 1339 aaPredicted RBP16.97■□□□□ 0.31
RIPK3-206ENST00000557624 CDK5RAP2Q96SN8 1893 aa16.97■□□□□ 0.31
RIPK3-206ENST00000557624 HIRAP54198 1017 aaPredicted RBP16.97■□□□□ 0.31
RIPK3-206ENST00000557624 EAPPQ56P03 285 aaPredicted RBP16.97■□□□□ 0.31
RIPK3-206ENST00000557624 CERS3Q8IU89 383 aa16.97■□□□□ 0.31
RIPK3-206ENST00000557624 CRNKL1Q9BZJ0 848 aaKnown RBP16.97■□□□□ 0.31
RIPK3-206ENST00000557624 VEZTQ9HBM0 779 aa16.97■□□□□ 0.31
RIPK3-206ENST00000557624 TMOD2Q9NZR1 351 aa16.97■□□□□ 0.31
RIPK3-206ENST00000557624 PRKAB2O43741 272 aa16.96■□□□□ 0.31
RIPK3-206ENST00000557624 VEGFAP15692 232 aaPredicted RBP16.96■□□□□ 0.31
RIPK3-206ENST00000557624 MFAP1P55081 439 aaKnown RBP16.96■□□□□ 0.31
RIPK3-206ENST00000557624 C8orf34Q49A92 452 aa16.96■□□□□ 0.31
RIPK3-206ENST00000557624 SDR42E1Q8WUS8 393 aa16.96■□□□□ 0.31
RIPK3-206ENST00000557624 ZNF70Q9UC06 446 aaPredicted RBP16.96■□□□□ 0.31
RIPK3-206ENST00000557624 SLC4A4Q9Y6R1 1079 aa16.96■□□□□ 0.31
RIPK3-206ENST00000557624 APPP05067 770 aa16.96■□□□□ 0.3
RIPK3-206ENST00000557624 USP5P45974 858 aa16.96■□□□□ 0.3
RIPK3-206ENST00000557624 PICALMQ13492 652 aa16.96■□□□□ 0.3
RIPK3-206ENST00000557624 SPDYE2Q495Y8 402 aa16.96■□□□□ 0.3
RIPK3-206ENST00000557624 VPS53Q5VIR6 699 aa16.96■□□□□ 0.3
RIPK3-206ENST00000557624 USP50Q70EL3 339 aaPredicted RBP16.96■□□□□ 0.3
RIPK3-206ENST00000557624 TGFBRAP1Q8WUH2 860 aa16.96■□□□□ 0.3
RIPK3-206ENST00000557624 WDHD1O75717 1129 aaPredicted RBP16.95■□□□□ 0.3
RIPK3-206ENST00000557624 NFIAQ12857 509 aa16.95■□□□□ 0.3
RIPK3-206ENST00000557624 KIAA1211Q6ZU35 1233 aa16.95■□□□□ 0.3
RIPK3-206ENST00000557624 ANO2Q9NQ90 1003 aa16.95■□□□□ 0.3
RIPK3-206ENST00000557624 GGA3Q9NZ52 723 aa16.95■□□□□ 0.3
RIPK3-206ENST00000557624 BAZ2AQ9UIF9 1905 aaKnown RBP16.94■□□□□ 0.3
RIPK3-206ENST00000557624 TCP10L2B9ZVM9 353 aa16.94■□□□□ 0.3
RIPK3-206ENST00000557624 GNAT2P19087 354 aa16.94■□□□□ 0.3
RIPK3-206ENST00000557624 ANGEL2Q5VTE6 544 aaKnown RBP16.94■□□□□ 0.3
RIPK3-206ENST00000557624 PNMA8AQ86V59 439 aaPredicted RBP16.94■□□□□ 0.3
RIPK3-206ENST00000557624 MAPKAPK5Q8IW41 473 aa16.94■□□□□ 0.3
RIPK3-206ENST00000557624 SCAF8Q9UPN6 1271 aaKnown RBP16.94■□□□□ 0.3
RIPK3-206ENST00000557624 POLR2AP24928 1970 aaKnown RBP16.94■□□□□ 0.3
RIPK3-206ENST00000557624 FOCADQ5VW36 1801 aa16.94■□□□□ 0.3
RIPK3-206ENST00000557624 YY1P25490 414 aa16.93■□□□□ 0.3
RIPK3-206ENST00000557624 TCP10Q12799 353 aa16.93■□□□□ 0.3
RIPK3-206ENST00000557624 GPBP1L1Q9HC44 474 aaPredicted RBP16.93■□□□□ 0.3
RIPK3-206ENST00000557624 DDX4Q9NQI0 724 aaKnown RBP16.93■□□□□ 0.3
RIPK3-206ENST00000557624 FLT1P17948 1338 aa16.93■□□□□ 0.3
RIPK3-206ENST00000557624 GSG1L2A8MUP6 293 aa16.92■□□□□ 0.3
RIPK3-206ENST00000557624 FOXP2O15409 715 aa16.92■□□□□ 0.3
RIPK3-206ENST00000557624 HSPD1P10809 573 aaKnown RBP16.92■□□□□ 0.3
RIPK3-206ENST00000557624 DDRGK1Q96HY6 314 aa16.92■□□□□ 0.3
RIPK3-206ENST00000557624 NAV1Q8NEY1 1877 aa16.92■□□□□ 0.3
RIPK3-206ENST00000557624 PATL2C9JE40 543 aaKnown RBP16.92■□□□□ 0.3
RIPK3-206ENST00000557624 REC8O95072 547 aa16.92■□□□□ 0.3
RIPK3-206ENST00000557624 POTEIP0CG38 1075 aa16.92■□□□□ 0.3
RIPK3-206ENST00000557624 POTEJP0CG39 1038 aa16.92■□□□□ 0.3
RIPK3-206ENST00000557624 TDO2P48775 406 aa16.92■□□□□ 0.3
RIPK3-206ENST00000557624 PTH1RQ03431 593 aa16.92■□□□□ 0.3
RIPK3-206ENST00000557624 SLC4A8Q2Y0W8 1093 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms