RNA–Protein interactions for RNA: ENST00000557517.1

PSMC6-215, Transcript of proteasome 26S subunit, ATPase 6, humanhuman

TSL 3

Gene PSMC6, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC6-215ENST00000557517 SLC10A4Q96EP9 437 aa13.19□□□□□ -0.3
PSMC6-215ENST00000557517 ZDHHC15Q96MV8 337 aa13.19□□□□□ -0.3
PSMC6-215ENST00000557517 TEPSINQ96N21 525 aa13.19□□□□□ -0.3
PSMC6-215ENST00000557517 ZNF646O15015 1829 aaPredicted RBP13.18□□□□□ -0.3
PSMC6-215ENST00000557517 CHAF1AQ13111 956 aaPredicted RBP13.18□□□□□ -0.3
PSMC6-215ENST00000557517 APOBEC3HQ6NTF7 200 aaKnown RBP13.18□□□□□ -0.3
PSMC6-215ENST00000557517 HHIPL2Q6UWX4 724 aa13.18□□□□□ -0.3
PSMC6-215ENST00000557517 WDR66Q8TBY9 1149 aa13.18□□□□□ -0.3
PSMC6-215ENST00000557517 VEZTQ9HBM0 779 aa13.18□□□□□ -0.3
PSMC6-215ENST00000557517 FZD1Q9UP38 647 aa13.18□□□□□ -0.3
PSMC6-215ENST00000557517 NOM1Q5C9Z4 860 aaKnown RBP13.17□□□□□ -0.3
PSMC6-215ENST00000557517 FKBP1CQ5VVH2 108 aa13.17□□□□□ -0.3
PSMC6-215ENST00000557517 TEKT1Q969V4 418 aa13.17□□□□□ -0.3
PSMC6-215ENST00000557517 CFHR5Q9BXR6 569 aa13.17□□□□□ -0.3
PSMC6-215ENST00000557517 SIL1Q9H173 461 aa13.17□□□□□ -0.3
PSMC6-215ENST00000557517 HPS5Q9UPZ3 1129 aa13.17□□□□□ -0.3
PSMC6-215ENST00000557517 PA2G4Q9UQ80 394 aaKnown RBP13.17□□□□□ -0.3
PSMC6-215ENST00000557517 PAPPA2Q9BXP8 1791 aa13.17□□□□□ -0.3
PSMC6-215ENST00000557517 SEMA3EO15041 775 aa13.16□□□□□ -0.3
PSMC6-215ENST00000557517 ZBTB48P10074 688 aaPredicted RBP13.16□□□□□ -0.3
PSMC6-215ENST00000557517 SREBF2Q12772 1141 aa13.16□□□□□ -0.3
PSMC6-215ENST00000557517 ATP2B3Q16720 1220 aa13.16□□□□□ -0.3
PSMC6-215ENST00000557517 ANKRD13AQ8IZ07 590 aa13.16□□□□□ -0.3
PSMC6-215ENST00000557517 FRAT1Q92837 279 aaPredicted RBP13.16□□□□□ -0.3
PSMC6-215ENST00000557517 TMEM106CQ9BVX2 250 aa13.16□□□□□ -0.3
PSMC6-215ENST00000557517 TCP10L2B9ZVM9 353 aa13.15□□□□□ -0.3
PSMC6-215ENST00000557517 SRGAP3O43295 1099 aa13.15□□□□□ -0.3
PSMC6-215ENST00000557517 GNAI2P04899 355 aa13.15□□□□□ -0.3
PSMC6-215ENST00000557517 IREB2P48200 963 aaKnown RBP13.15□□□□□ -0.3
PSMC6-215ENST00000557517 TNNI2P48788 182 aa13.15□□□□□ -0.3
PSMC6-215ENST00000557517 TIMM10P62072 90 aa13.15□□□□□ -0.3
PSMC6-215ENST00000557517 HNRNPUQ00839 825 aaKnown RBP eCLIP13.15□□□□□ -0.3
PSMC6-215ENST00000557517 PKN2Q16513 984 aaKnown RBP13.15□□□□□ -0.3
PSMC6-215ENST00000557517 FAM83AQ86UY5 434 aa13.15□□□□□ -0.3
PSMC6-215ENST00000557517 CLMNQ96JQ2 1002 aa13.15□□□□□ -0.3
PSMC6-215ENST00000557517 GNL3LQ9NVN8 582 aaKnown RBP13.15□□□□□ -0.3
PSMC6-215ENST00000557517 TNNQ9UQP3 1299 aa13.15□□□□□ -0.3
PSMC6-215ENST00000557517 SPEF2Q9C093 1822 aa13.15□□□□□ -0.3
PSMC6-215ENST00000557517 SSC5DA1L4H1 1573 aa13.15□□□□□ -0.3
PSMC6-215ENST00000557517 MAST3O60307 1309 aa13.14□□□□□ -0.31
PSMC6-215ENST00000557517 SALL1Q9NSC2 1324 aa13.14□□□□□ -0.31
PSMC6-215ENST00000557517 TESPA1A2RU30 521 aaPredicted RBP13.14□□□□□ -0.31
PSMC6-215ENST00000557517 MANSC4A6NHS7 340 aaPredicted RBP13.14□□□□□ -0.31
PSMC6-215ENST00000557517 TBC1D8O95759 1140 aa13.14□□□□□ -0.31
PSMC6-215ENST00000557517 ZKSCAN2Q63HK3 967 aa13.14□□□□□ -0.31
PSMC6-215ENST00000557517 CCDC102BQ68D86 513 aa13.14□□□□□ -0.31
PSMC6-215ENST00000557517 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.14□□□□□ -0.31
PSMC6-215ENST00000557517 CDAN1Q8IWY9 1227 aa13.14□□□□□ -0.31
PSMC6-215ENST00000557517 CLUAP1Q96AJ1 413 aa13.14□□□□□ -0.31
PSMC6-215ENST00000557517 TMEM39BQ9GZU3 492 aa13.14□□□□□ -0.31
PSMC6-215ENST00000557517 DENND2AQ9ULE3 1009 aa13.14□□□□□ -0.31
PSMC6-215ENST00000557517 KIAA0100Q14667 2235 aaKnown RBP13.13□□□□□ -0.31
PSMC6-215ENST00000557517 ALDH1A1P00352 501 aa13.13□□□□□ -0.31
PSMC6-215ENST00000557517 PHKA1P46020 1223 aa13.13□□□□□ -0.31
PSMC6-215ENST00000557517 MKRN3Q13064 507 aaKnown RBP13.13□□□□□ -0.31
PSMC6-215ENST00000557517 GCC1Q96CN9 775 aa13.13□□□□□ -0.31
PSMC6-215ENST00000557517 WNK4Q96J92 1243 aa13.13□□□□□ -0.31
PSMC6-215ENST00000557517 AKAP2Q9Y2D5 859 aa13.13□□□□□ -0.31
PSMC6-215ENST00000557517 GPR25O00155 361 aa13.12□□□□□ -0.31
PSMC6-215ENST00000557517 ZBTB7BO15156 539 aaPredicted RBP13.12□□□□□ -0.31
PSMC6-215ENST00000557517 PRDX5P30044 214 aa13.12□□□□□ -0.31
PSMC6-215ENST00000557517 ADORA1P30542 326 aa13.12□□□□□ -0.31
PSMC6-215ENST00000557517 CACNB3P54284 484 aa13.12□□□□□ -0.31
PSMC6-215ENST00000557517 MAP3K9P80192 1104 aa13.12□□□□□ -0.31
PSMC6-215ENST00000557517 TFCP2Q12800 502 aa13.12□□□□□ -0.31
PSMC6-215ENST00000557517 TMEM57Q8N5G2 664 aa13.12□□□□□ -0.31
PSMC6-215ENST00000557517 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.12□□□□□ -0.31
PSMC6-215ENST00000557517 ZNF296Q8WUU4 475 aaPredicted RBP13.12□□□□□ -0.31
PSMC6-215ENST00000557517 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.12□□□□□ -0.31
PSMC6-215ENST00000557517 PDS5AQ29RF7 1337 aaKnown RBP13.12□□□□□ -0.31
PSMC6-215ENST00000557517 CEP290O15078 2479 aa13.11□□□□□ -0.31
PSMC6-215ENST00000557517 PNMA6EA0A0J9YXQ4 647 aa13.11□□□□□ -0.31
PSMC6-215ENST00000557517 A0A1B0GUL7 405 aa13.11□□□□□ -0.31
PSMC6-215ENST00000557517 LDHBP07195 334 aaKnown RBP13.11□□□□□ -0.31
PSMC6-215ENST00000557517 GJA5P36382 358 aa13.11□□□□□ -0.31
PSMC6-215ENST00000557517 FAM151AQ8WW52 585 aa13.11□□□□□ -0.31
PSMC6-215ENST00000557517 XAGE2Q96GT9 111 aa13.11□□□□□ -0.31
PSMC6-215ENST00000557517 MS4A4AQ96JQ5 239 aa13.11□□□□□ -0.31
PSMC6-215ENST00000557517 PTPN18Q99952 460 aa13.11□□□□□ -0.31
PSMC6-215ENST00000557517 R3HDMLQ9H3Y0 253 aa13.11□□□□□ -0.31
PSMC6-215ENST00000557517 TMOD2Q9NZR1 351 aa13.11□□□□□ -0.31
PSMC6-215ENST00000557517 DAGLAQ9Y4D2 1042 aa13.11□□□□□ -0.31
PSMC6-215ENST00000557517 ATP8B2P98198 1209 aa13.1□□□□□ -0.31
PSMC6-215ENST00000557517 RASGRF1Q13972 1273 aa13.1□□□□□ -0.31
PSMC6-215ENST00000557517 MVPQ14764 893 aaKnown RBP13.1□□□□□ -0.31
PSMC6-215ENST00000557517 DIXDC1Q155Q3 683 aa13.1□□□□□ -0.31
PSMC6-215ENST00000557517 CDC42EP5Q6NZY7 148 aa13.1□□□□□ -0.31
PSMC6-215ENST00000557517 ZGPATQ8N5A5 531 aaKnown RBP13.1□□□□□ -0.31
PSMC6-215ENST00000557517 HOOK2Q96ED9 719 aa13.1□□□□□ -0.31
PSMC6-215ENST00000557517 ZBED9Q6R2W3 1325 aa13.1□□□□□ -0.31
PSMC6-215ENST00000557517 A0A1B0GUL6 1792 aa13.09□□□□□ -0.31
PSMC6-215ENST00000557517 IGF2BP3O00425 579 aaKnown RBP eCLIP13.09□□□□□ -0.31
PSMC6-215ENST00000557517 PLCG2P16885 1265 aa13.09□□□□□ -0.31
PSMC6-215ENST00000557517 G3BP1Q13283 466 aaKnown RBP eCLIP13.09□□□□□ -0.31
PSMC6-215ENST00000557517 VGLL4Q14135 290 aa13.09□□□□□ -0.31
PSMC6-215ENST00000557517 LCE2DQ5TA82 110 aaPredicted RBP13.09□□□□□ -0.31
PSMC6-215ENST00000557517 FBXO46Q6PJ61 603 aaPredicted RBP13.09□□□□□ -0.31
PSMC6-215ENST00000557517 SSH3Q8TE77 659 aa13.09□□□□□ -0.31
PSMC6-215ENST00000557517 OPTNQ96CV9 577 aa13.09□□□□□ -0.31
PSMC6-215ENST00000557517 RBBP6Q7Z6E9 1792 aaKnown RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms