RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 METTL22Q9BUU2 404 aaPredicted RBP7.54□□□□□ -1.2
VPS33B-207ENST00000557470 COA1Q9GZY4 146 aa7.54□□□□□ -1.2
VPS33B-207ENST00000557470 GREM2Q9H772 168 aa7.54□□□□□ -1.2
VPS33B-207ENST00000557470 NPDC1Q9NQX5 325 aaPredicted RBP7.54□□□□□ -1.2
VPS33B-207ENST00000557470 BSDC1Q9NW68 430 aaPredicted RBP7.54□□□□□ -1.2
VPS33B-207ENST00000557470 ANGEL1Q9UNK9 670 aaKnown RBP7.54□□□□□ -1.2
VPS33B-207ENST00000557470 TRIM17Q9Y577 477 aa7.54□□□□□ -1.2
VPS33B-207ENST00000557470 BRCA2P51587 3418 aa7.54□□□□□ -1.2
VPS33B-207ENST00000557470 SPEF2Q9C093 1822 aa7.53□□□□□ -1.2
VPS33B-207ENST00000557470 IGF2BP3O00425 579 aaKnown RBP eCLIP7.53□□□□□ -1.2
VPS33B-207ENST00000557470 ALDH1A1P00352 501 aa7.53□□□□□ -1.2
VPS33B-207ENST00000557470 IGKV5-2P06315 115 aa7.53□□□□□ -1.2
VPS33B-207ENST00000557470 ZNF853P0CG23 659 aa7.53□□□□□ -1.2
VPS33B-207ENST00000557470 APOBEC3FQ8IUX4 373 aaKnown RBP7.53□□□□□ -1.2
VPS33B-207ENST00000557470 KIAA0825Q8IV33 1275 aa7.53□□□□□ -1.2
VPS33B-207ENST00000557470 TTLL11Q8NHH1 800 aa7.53□□□□□ -1.2
VPS33B-207ENST00000557470 CLMNQ96JQ2 1002 aa7.53□□□□□ -1.2
VPS33B-207ENST00000557470 MAP3K2Q9Y2U5 619 aa7.53□□□□□ -1.2
VPS33B-207ENST00000557470 SSC5DA1L4H1 1573 aa7.53□□□□□ -1.2
VPS33B-207ENST00000557470 MYBBP1AQ9BQG0 1328 aaKnown RBP7.52□□□□□ -1.2
VPS33B-207ENST00000557470 COL1A1P02452 1464 aaPredicted RBP7.52□□□□□ -1.21
VPS33B-207ENST00000557470 MANSC4A6NHS7 340 aaPredicted RBP7.52□□□□□ -1.21
VPS33B-207ENST00000557470 CDK11BP21127 795 aaKnown RBP7.52□□□□□ -1.21
VPS33B-207ENST00000557470 MMP14P50281 582 aa7.52□□□□□ -1.21
VPS33B-207ENST00000557470 WDR43Q15061 677 aaKnown RBP eCLIP7.52□□□□□ -1.21
VPS33B-207ENST00000557470 TTLL5Q6EMB2 1281 aa7.52□□□□□ -1.21
VPS33B-207ENST00000557470 C8orf58Q8NAV2 365 aa7.52□□□□□ -1.21
VPS33B-207ENST00000557470 SLC10A4Q96EP9 437 aa7.52□□□□□ -1.21
VPS33B-207ENST00000557470 DEFB129Q9H1M3 183 aa7.52□□□□□ -1.21
VPS33B-207ENST00000557470 IFT57Q9NWB7 429 aa7.52□□□□□ -1.21
VPS33B-207ENST00000557470 ADAMTS8Q9UP79 889 aa7.52□□□□□ -1.21
VPS33B-207ENST00000557470 KIAA0100Q14667 2235 aaKnown RBP7.52□□□□□ -1.21
VPS33B-207ENST00000557470 ZNF804BA4D1E1 1349 aa7.52□□□□□ -1.21
VPS33B-207ENST00000557470 PI4KAP2A4QPH2 592 aa7.51□□□□□ -1.21
VPS33B-207ENST00000557470 DDX58O95786 925 aaKnown RBP7.51□□□□□ -1.21
VPS33B-207ENST00000557470 ZBTB48P10074 688 aaPredicted RBP7.51□□□□□ -1.21
VPS33B-207ENST00000557470 FXR1P51114 621 aaKnown RBP eCLIP7.51□□□□□ -1.21
VPS33B-207ENST00000557470 INHBEP58166 350 aa7.51□□□□□ -1.21
VPS33B-207ENST00000557470 GTF2IP78347 998 aa7.51□□□□□ -1.21
VPS33B-207ENST00000557470 CAP1Q01518 475 aa7.51□□□□□ -1.21
VPS33B-207ENST00000557470 CRHR2Q13324 411 aa7.51□□□□□ -1.21
VPS33B-207ENST00000557470 MAP3K11Q16584 847 aa7.51□□□□□ -1.21
VPS33B-207ENST00000557470 CWF19L2Q2TBE0 894 aaKnown RBP7.51□□□□□ -1.21
VPS33B-207ENST00000557470 INTS3Q68E01 1043 aaKnown RBP7.51□□□□□ -1.21
VPS33B-207ENST00000557470 CERS5Q8N5B7 392 aa7.51□□□□□ -1.21
VPS33B-207ENST00000557470 PI4KAP1Q8N8J0 262 aa7.51□□□□□ -1.21
VPS33B-207ENST00000557470 KRI1Q8N9T8 703 aaKnown RBP7.51□□□□□ -1.21
VPS33B-207ENST00000557470 CD99L2Q8TCZ2 262 aa7.51□□□□□ -1.21
VPS33B-207ENST00000557470 ARMC5Q96C12 935 aa7.51□□□□□ -1.21
VPS33B-207ENST00000557470 WNK4Q96J92 1243 aa7.51□□□□□ -1.21
VPS33B-207ENST00000557470 PTPN22Q9Y2R2 807 aa7.51□□□□□ -1.21
VPS33B-207ENST00000557470 LEMD3Q9Y2U8 911 aa7.51□□□□□ -1.21
VPS33B-207ENST00000557470 PCDHAC2Q9Y5I4 1007 aa7.51□□□□□ -1.21
VPS33B-207ENST00000557470 CEP290O15078 2479 aa7.5□□□□□ -1.21
VPS33B-207ENST00000557470 NEURL1BA8MQ27 555 aa7.5□□□□□ -1.21
VPS33B-207ENST00000557470 EN2P19622 333 aaPredicted RBP7.5□□□□□ -1.21
VPS33B-207ENST00000557470 ITGA6P23229 1130 aa7.5□□□□□ -1.21
VPS33B-207ENST00000557470 GJA5P36382 358 aa7.5□□□□□ -1.21
VPS33B-207ENST00000557470 IGHMBP2P38935 993 aaKnown RBP7.5□□□□□ -1.21
VPS33B-207ENST00000557470 GNAI1P63096 354 aa7.5□□□□□ -1.21
VPS33B-207ENST00000557470 DLGAP5Q15398 846 aa7.5□□□□□ -1.21
VPS33B-207ENST00000557470 TMCO4Q5TGY1 634 aa7.5□□□□□ -1.21
VPS33B-207ENST00000557470 CCDC30Q5VVM6 783 aa7.5□□□□□ -1.21
VPS33B-207ENST00000557470 KSR2Q6VAB6 950 aa7.5□□□□□ -1.21
VPS33B-207ENST00000557470 UBE3BQ7Z3V4 1068 aa7.5□□□□□ -1.21
VPS33B-207ENST00000557470 TSPYL6Q8N831 410 aa7.5□□□□□ -1.21
VPS33B-207ENST00000557470 TATDN2Q93075 761 aa7.5□□□□□ -1.21
VPS33B-207ENST00000557470 ERO1AQ96HE7 468 aa7.5□□□□□ -1.21
VPS33B-207ENST00000557470 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.5□□□□□ -1.21
VPS33B-207ENST00000557470 MTMR7Q9Y216 660 aa7.5□□□□□ -1.21
VPS33B-207ENST00000557470 RBBP6Q7Z6E9 1792 aaKnown RBP7.5□□□□□ -1.21
VPS33B-207ENST00000557470 MYH3P11055 1940 aa7.5□□□□□ -1.21
VPS33B-207ENST00000557470 AOX1Q06278 1338 aa7.5□□□□□ -1.21
VPS33B-207ENST00000557470 IRS2Q9Y4H2 1338 aa7.5□□□□□ -1.21
VPS33B-207ENST00000557470 LAMB1P07942 1786 aa7.49□□□□□ -1.21
VPS33B-207ENST00000557470 CLRN2A0PK11 232 aa7.49□□□□□ -1.21
VPS33B-207ENST00000557470 F8W031 263 aaPredicted RBP7.49□□□□□ -1.21
VPS33B-207ENST00000557470 H7C1W4 665 aa7.49□□□□□ -1.21
VPS33B-207ENST00000557470 SNAP23O00161 211 aa7.49□□□□□ -1.21
VPS33B-207ENST00000557470 APAF1O14727 1248 aa7.49□□□□□ -1.21
VPS33B-207ENST00000557470 PPP1R12BO60237 982 aaPredicted RBP7.49□□□□□ -1.21
VPS33B-207ENST00000557470 KCNJ4P48050 445 aa7.49□□□□□ -1.21
VPS33B-207ENST00000557470 CHRNDQ07001 517 aa7.49□□□□□ -1.21
VPS33B-207ENST00000557470 NEXNQ0ZGT2 675 aa7.49□□□□□ -1.21
VPS33B-207ENST00000557470 NBPF12Q5TAG4 269 aaPredicted RBP7.49□□□□□ -1.21
VPS33B-207ENST00000557470 PADI6Q6TGC4 694 aa7.49□□□□□ -1.21
VPS33B-207ENST00000557470 NUDT18Q6ZVK8 323 aa7.49□□□□□ -1.21
VPS33B-207ENST00000557470 MTMR14Q8NCE2 650 aa7.49□□□□□ -1.21
VPS33B-207ENST00000557470 LRCH3Q96II8 777 aa7.49□□□□□ -1.21
VPS33B-207ENST00000557470 MPHOSPH8Q99549 860 aa7.49□□□□□ -1.21
VPS33B-207ENST00000557470 PTPN18Q99952 460 aa7.49□□□□□ -1.21
VPS33B-207ENST00000557470 ANKRD2Q9GZV1 360 aa7.49□□□□□ -1.21
VPS33B-207ENST00000557470 EFCC1Q9HA90 598 aa7.49□□□□□ -1.21
VPS33B-207ENST00000557470 VEZTQ9HBM0 779 aa7.49□□□□□ -1.21
VPS33B-207ENST00000557470 CD209Q9NNX6 404 aa7.49□□□□□ -1.21
VPS33B-207ENST00000557470 PNMA3Q9UL41 463 aa7.49□□□□□ -1.21
VPS33B-207ENST00000557470 PPP2R3BQ9Y5P8 575 aa7.49□□□□□ -1.21
VPS33B-207ENST00000557470 TRIOBPQ9H2D6 2365 aa7.48□□□□□ -1.21
VPS33B-207ENST00000557470 A6NJR5 290 aa7.48□□□□□ -1.21
VPS33B-207ENST00000557470 UNCXA6NJT0 531 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms