RNA–Protein interactions for RNA: ENST00000557266.5

RCCD1-208, Transcript of RCC1 domain containing 1, humanhuman

TSL 1 (best)

Gene RCCD1, Length 2,110 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-208ENST00000557266 APOA5Q6Q788 366 aa26.29■■□□□ 1.8
RCCD1-208ENST00000557266 CCDC144CPQ8IYA2 1237 aa26.29■■□□□ 1.8
RCCD1-208ENST00000557266 AIFM3Q96NN9 605 aa26.29■■□□□ 1.8
RCCD1-208ENST00000557266 RXRAP19793 462 aa26.29■■□□□ 1.8
RCCD1-208ENST00000557266 GTF2F1P35269 517 aaKnown RBP eCLIP26.29■■□□□ 1.8
RCCD1-208ENST00000557266 RASGRF1Q13972 1273 aa26.29■■□□□ 1.8
RCCD1-208ENST00000557266 RGS22Q8NE09 1264 aa26.29■■□□□ 1.8
RCCD1-208ENST00000557266 EPB41L4AQ9HCS5 686 aaPredicted RBP26.29■■□□□ 1.8
RCCD1-208ENST00000557266 SLC5A1P13866 664 aa26.28■■□□□ 1.8
RCCD1-208ENST00000557266 ALX1Q15699 326 aa26.28■■□□□ 1.8
RCCD1-208ENST00000557266 BARGINQ6ZT62 677 aa26.28■■□□□ 1.8
RCCD1-208ENST00000557266 SDF4Q9BRK5 362 aa26.28■■□□□ 1.8
RCCD1-208ENST00000557266 CDC27P30260 824 aa26.27■■□□□ 1.8
RCCD1-208ENST00000557266 ANO1Q5XXA6 986 aa26.27■■□□□ 1.8
RCCD1-208ENST00000557266 INTS5Q6P9B9 1019 aaKnown RBP26.27■■□□□ 1.8
RCCD1-208ENST00000557266 CEP57L1Q8IYX8 460 aa26.27■■□□□ 1.8
RCCD1-208ENST00000557266 IGDCC4Q8TDY8 1250 aa26.27■■□□□ 1.8
RCCD1-208ENST00000557266 MRFAP1L1Q96HT8 127 aa26.27■■□□□ 1.8
RCCD1-208ENST00000557266 SYNE3Q6ZMZ3 975 aa26.27■■□□□ 1.8
RCCD1-208ENST00000557266 TMEM87BQ96K49 555 aa26.27■■□□□ 1.8
RCCD1-208ENST00000557266 ALG1Q9BT22 464 aa26.27■■□□□ 1.8
RCCD1-208ENST00000557266 DOT1LQ8TEK3 1739 aa26.26■■□□□ 1.79
RCCD1-208ENST00000557266 BECN2A8MW95 431 aa26.26■■□□□ 1.79
RCCD1-208ENST00000557266 AXDND1Q5T1B0 1012 aaPredicted RBP26.26■■□□□ 1.79
RCCD1-208ENST00000557266 MAGEB6Q8N7X4 407 aa26.26■■□□□ 1.79
RCCD1-208ENST00000557266 CACTINQ8WUQ7 758 aaKnown RBP26.26■■□□□ 1.79
RCCD1-208ENST00000557266 LY9Q9HBG7 655 aa26.26■■□□□ 1.79
RCCD1-208ENST00000557266 INCENPQ9NQS7 918 aa26.26■■□□□ 1.79
RCCD1-208ENST00000557266 SEC31BQ9NQW1 1179 aa26.26■■□□□ 1.79
RCCD1-208ENST00000557266 CDKL5O76039 1030 aa26.26■■□□□ 1.79
RCCD1-208ENST00000557266 VPS72Q15906 364 aa26.26■■□□□ 1.79
RCCD1-208ENST00000557266 MICU3Q86XE3 530 aa26.26■■□□□ 1.79
RCCD1-208ENST00000557266 PATL2C9JE40 543 aaKnown RBP26.25■■□□□ 1.79
RCCD1-208ENST00000557266 MBD4O95243 580 aa26.25■■□□□ 1.79
RCCD1-208ENST00000557266 FAM177BA6PVY3 158 aa26.24■■□□□ 1.79
RCCD1-208ENST00000557266 IFNL3Q8IZI9 196 aa26.24■■□□□ 1.79
RCCD1-208ENST00000557266 AOPEPQ8N6M6 819 aa26.24■■□□□ 1.79
RCCD1-208ENST00000557266 UBE2Q2Q8WVN8 375 aa26.24■■□□□ 1.79
RCCD1-208ENST00000557266 PHKBQ93100 1093 aa26.24■■□□□ 1.79
RCCD1-208ENST00000557266 MAP7D2Q96T17 732 aa26.24■■□□□ 1.79
RCCD1-208ENST00000557266 KIAA1468Q9P260 1216 aa26.24■■□□□ 1.79
RCCD1-208ENST00000557266 ZBTB43O43298 467 aa26.24■■□□□ 1.79
RCCD1-208ENST00000557266 MAP3K12Q12852 859 aa26.24■■□□□ 1.79
RCCD1-208ENST00000557266 NTRK3Q16288 839 aa26.24■■□□□ 1.79
RCCD1-208ENST00000557266 KRT40Q6A162 431 aa26.24■■□□□ 1.79
RCCD1-208ENST00000557266 SGMS1Q86VZ5 419 aa26.24■■□□□ 1.79
RCCD1-208ENST00000557266 VPS37DQ86XT2 251 aa26.24■■□□□ 1.79
RCCD1-208ENST00000557266 FBXW7Q969H0 707 aa26.24■■□□□ 1.79
RCCD1-208ENST00000557266 MPHOSPH8Q99549 860 aa26.24■■□□□ 1.79
RCCD1-208ENST00000557266 UTP14AQ9BVJ6 771 aaKnown RBP26.24■■□□□ 1.79
RCCD1-208ENST00000557266 FAM217BQ9NTX9 383 aaPredicted RBP26.24■■□□□ 1.79
RCCD1-208ENST00000557266 CCDC87Q9NVE4 849 aa26.24■■□□□ 1.79
RCCD1-208ENST00000557266 TACC3Q9Y6A5 838 aa26.24■■□□□ 1.79
RCCD1-208ENST00000557266 DDB1Q16531 1140 aa26.23■■□□□ 1.79
RCCD1-208ENST00000557266 TSC1Q92574 1164 aa26.23■■□□□ 1.79
RCCD1-208ENST00000557266 CTDSPL2Q05D32 466 aa26.23■■□□□ 1.79
RCCD1-208ENST00000557266 TMEM67Q5HYA8 995 aa26.23■■□□□ 1.79
RCCD1-208ENST00000557266 NAT10Q9H0A0 1025 aaKnown RBP26.23■■□□□ 1.79
RCCD1-208ENST00000557266 NAPBQ9H115 298 aa26.23■■□□□ 1.79
RCCD1-208ENST00000557266 ARMT1Q9H993 441 aa26.23■■□□□ 1.79
RCCD1-208ENST00000557266 DOCK2Q92608 1830 aa26.22■■□□□ 1.79
RCCD1-208ENST00000557266 MROH7-TTC4A0A0A0MT08 1334 aa26.22■■□□□ 1.79
RCCD1-208ENST00000557266 RANBP6O60518 1105 aaKnown RBP26.22■■□□□ 1.79
RCCD1-208ENST00000557266 WDHD1O75717 1129 aaPredicted RBP26.22■■□□□ 1.79
RCCD1-208ENST00000557266 CMA1P23946 247 aa26.22■■□□□ 1.79
RCCD1-208ENST00000557266 CRKLP46109 303 aaKnown RBP26.22■■□□□ 1.79
RCCD1-208ENST00000557266 SLC39A14Q15043 492 aa26.22■■□□□ 1.79
RCCD1-208ENST00000557266 MYL10Q9BUA6 226 aa26.22■■□□□ 1.79
RCCD1-208ENST00000557266 ZNF202O95125 648 aa26.21■■□□□ 1.79
RCCD1-208ENST00000557266 PFKFB1P16118 471 aa26.21■■□□□ 1.79
RCCD1-208ENST00000557266 DPCR1Q3MIW9 517 aa26.21■■□□□ 1.79
RCCD1-208ENST00000557266 CPLX2Q6PUV4 134 aaKnown RBP26.21■■□□□ 1.79
RCCD1-208ENST00000557266 NFXL1Q6ZNB6 911 aa26.21■■□□□ 1.79
RCCD1-208ENST00000557266 USP21Q9UK80 565 aa26.21■■□□□ 1.79
RCCD1-208ENST00000557266 GOLGA8AA7E2F4 631 aa26.21■■□□□ 1.79
RCCD1-208ENST00000557266 GSG1L2A8MUP6 293 aa26.21■■□□□ 1.79
RCCD1-208ENST00000557266 CAMTA2O94983 1202 aa26.21■■□□□ 1.79
RCCD1-208ENST00000557266 ZSWIM5Q9P217 1185 aa26.21■■□□□ 1.79
RCCD1-208ENST00000557266 LIFRP42702 1097 aa26.2■■□□□ 1.79
RCCD1-208ENST00000557266 MARCKSP29966 332 aaPredicted RBP26.2■■□□□ 1.78
RCCD1-208ENST00000557266 BCAMP50895 628 aa26.2■■□□□ 1.78
RCCD1-208ENST00000557266 MEX3CQ5U5Q3 659 aaKnown RBP26.2■■□□□ 1.78
RCCD1-208ENST00000557266 LRRC8AQ8IWT6 810 aa26.2■■□□□ 1.78
RCCD1-208ENST00000557266 TIAM2Q8IVF5 1701 aa26.19■■□□□ 1.78
RCCD1-208ENST00000557266 PRKAB2O43741 272 aa26.19■■□□□ 1.78
RCCD1-208ENST00000557266 ATP6V1AP38606 617 aa26.19■■□□□ 1.78
RCCD1-208ENST00000557266 IARSP41252 1262 aaKnown RBP26.19■■□□□ 1.78
RCCD1-208ENST00000557266 CHAF1AQ13111 956 aaPredicted RBP26.19■■□□□ 1.78
RCCD1-208ENST00000557266 ARID5BQ14865 1188 aa26.19■■□□□ 1.78
RCCD1-208ENST00000557266 SLC3A2P08195 630 aaKnown RBP26.18■■□□□ 1.78
RCCD1-208ENST00000557266 CCDC152Q4G0S7 254 aa26.18■■□□□ 1.78
RCCD1-208ENST00000557266 AKNAD1Q5T1N1 836 aa26.18■■□□□ 1.78
RCCD1-208ENST00000557266 LCORLQ8N3X6 602 aa26.18■■□□□ 1.78
RCCD1-208ENST00000557266 BPIFA3Q9BQP9 254 aa26.18■■□□□ 1.78
RCCD1-208ENST00000557266 UBE2Q2LH0YL09 131 aa26.18■■□□□ 1.78
RCCD1-208ENST00000557266 RIOK3O14730 519 aaKnown RBP26.18■■□□□ 1.78
RCCD1-208ENST00000557266 IFIT3O14879 490 aaKnown RBP26.18■■□□□ 1.78
RCCD1-208ENST00000557266 PTPAQ15257 358 aa26.18■■□□□ 1.78
RCCD1-208ENST00000557266 PARP10Q53GL7 1025 aa26.18■■□□□ 1.78
RCCD1-208ENST00000557266 MTERF4Q7Z6M4 381 aaKnown RBP26.18■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms