RNA–Protein interactions for RNA: ENST00000557041.1

TMEM55B-207, humanhuman

TSL 2

Gene TMEM55B, Length 3,453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-207ENST00000557041 DYNLL1P63167 89 aaKnown RBP17.73■□□□□ 0.43
TMEM55B-207ENST00000557041 AATFQ9NY61 560 aaKnown RBP eCLIP17.73■□□□□ 0.43
TMEM55B-207ENST00000557041 IFNKQ9P0W0 207 aa17.73■□□□□ 0.43
TMEM55B-207ENST00000557041 ERFEQ4G0M1 354 aa17.73■□□□□ 0.43
TMEM55B-207ENST00000557041 SRP68Q9UHB9 627 aaKnown RBP17.73■□□□□ 0.43
TMEM55B-207ENST00000557041 CPDO75976 1380 aa17.72■□□□□ 0.43
TMEM55B-207ENST00000557041 CSF1RP07333 972 aa17.72■□□□□ 0.43
TMEM55B-207ENST00000557041 SKILP12757 684 aa17.72■□□□□ 0.43
TMEM55B-207ENST00000557041 SETDB2Q96T68 719 aa17.72■□□□□ 0.43
TMEM55B-207ENST00000557041 CABP5Q9NP86 173 aa17.72■□□□□ 0.43
TMEM55B-207ENST00000557041 RCOR1Q9UKL0 485 aa17.72■□□□□ 0.43
TMEM55B-207ENST00000557041 RGPD5Q99666 1765 aa17.72■□□□□ 0.43
TMEM55B-207ENST00000557041 KIF28PB7ZC32 967 aa17.72■□□□□ 0.43
TMEM55B-207ENST00000557041 AFMP43652 599 aa17.72■□□□□ 0.43
TMEM55B-207ENST00000557041 SMARCC2Q8TAQ2 1214 aa17.72■□□□□ 0.43
TMEM55B-207ENST00000557041 STRBPQ96SI9 672 aaKnown RBP17.72■□□□□ 0.43
TMEM55B-207ENST00000557041 PATL2C9JE40 543 aaKnown RBP17.71■□□□□ 0.43
TMEM55B-207ENST00000557041 TRIM28Q13263 835 aaKnown RBP17.71■□□□□ 0.43
TMEM55B-207ENST00000557041 DPCR1Q3MIW9 517 aa17.71■□□□□ 0.43
TMEM55B-207ENST00000557041 FAM47AQ5JRC9 791 aa17.71■□□□□ 0.43
TMEM55B-207ENST00000557041 DZIP1Q86YF9 867 aaKnown RBP17.71■□□□□ 0.43
TMEM55B-207ENST00000557041 MB21D2Q8IYB1 491 aaPredicted RBP17.71■□□□□ 0.43
TMEM55B-207ENST00000557041 DIS3L2Q8IYB7 885 aaKnown RBP17.71■□□□□ 0.43
TMEM55B-207ENST00000557041 SMIM22K7EJ46 135 aa17.71■□□□□ 0.43
TMEM55B-207ENST00000557041 AKNAD1Q5T1N1 836 aa17.71■□□□□ 0.43
TMEM55B-207ENST00000557041 STAMQ92783 540 aa17.71■□□□□ 0.43
TMEM55B-207ENST00000557041 TPM3P06753 285 aa17.71■□□□□ 0.43
TMEM55B-207ENST00000557041 CCAR2Q8N163 923 aaKnown RBP17.71■□□□□ 0.43
TMEM55B-207ENST00000557041 BAZ2BQ9UIF8 2168 aaKnown RBP17.71■□□□□ 0.42
TMEM55B-207ENST00000557041 COL5A2P05997 1499 aaPredicted RBP17.7■□□□□ 0.42
TMEM55B-207ENST00000557041 NR5A1Q13285 461 aa17.7■□□□□ 0.42
TMEM55B-207ENST00000557041 IQCA1Q86XH1 822 aa17.7■□□□□ 0.42
TMEM55B-207ENST00000557041 NLRP3Q96P20 1036 aa17.7■□□□□ 0.42
TMEM55B-207ENST00000557041 MROH5Q6ZUA9 1318 aa17.7■□□□□ 0.42
TMEM55B-207ENST00000557041 PALLDQ8WX93 1383 aa17.7■□□□□ 0.42
TMEM55B-207ENST00000557041 PFKFB1P16118 471 aa17.7■□□□□ 0.42
TMEM55B-207ENST00000557041 XBP1P17861 261 aa17.7■□□□□ 0.42
TMEM55B-207ENST00000557041 PNOCQ13519 176 aa17.7■□□□□ 0.42
TMEM55B-207ENST00000557041 ITPK1Q13572 414 aa17.7■□□□□ 0.42
TMEM55B-207ENST00000557041 ZNF827Q17R98 1081 aa17.7■□□□□ 0.42
TMEM55B-207ENST00000557041 IFIT1BQ5T764 474 aaKnown RBP17.7■□□□□ 0.42
TMEM55B-207ENST00000557041 LINC00301Q8NCQ3 95 aa17.7■□□□□ 0.42
TMEM55B-207ENST00000557041 VPS54Q9P1Q0 977 aa17.7■□□□□ 0.42
TMEM55B-207ENST00000557041 SLIT3O75094 1523 aa17.7■□□□□ 0.42
TMEM55B-207ENST00000557041 TSPY2A6NKD2 308 aa17.7■□□□□ 0.42
TMEM55B-207ENST00000557041 USP5P45974 858 aa17.7■□□□□ 0.42
TMEM55B-207ENST00000557041 PRDM10Q9NQV6 1147 aa17.7■□□□□ 0.42
TMEM55B-207ENST00000557041 V9GY48 417 aaPredicted RBP17.7■□□□□ 0.42
TMEM55B-207ENST00000557041 UBE3CQ15386 1083 aa17.69■□□□□ 0.42
TMEM55B-207ENST00000557041 KRT23Q9C075 422 aa17.69■□□□□ 0.42
TMEM55B-207ENST00000557041 USP17L12C9JPN9 530 aa17.68■□□□□ 0.42
TMEM55B-207ENST00000557041 USP17L21D6R901 530 aa17.68■□□□□ 0.42
TMEM55B-207ENST00000557041 RRP9O43818 475 aaKnown RBP17.68■□□□□ 0.42
TMEM55B-207ENST00000557041 ADALQ6DHV7 355 aa17.68■□□□□ 0.42
TMEM55B-207ENST00000557041 MARCH10Q8NA82 808 aaPredicted RBP17.68■□□□□ 0.42
TMEM55B-207ENST00000557041 ESR2Q92731 530 aa17.68■□□□□ 0.42
TMEM55B-207ENST00000557041 IL17RAQ96F46 866 aa17.68■□□□□ 0.42
TMEM55B-207ENST00000557041 GPR101Q96P66 508 aaPredicted RBP17.68■□□□□ 0.42
TMEM55B-207ENST00000557041 STX8Q9UNK0 236 aa17.68■□□□□ 0.42
TMEM55B-207ENST00000557041 UBAP1LF5GYI3 381 aa17.68■□□□□ 0.42
TMEM55B-207ENST00000557041 KIF23Q02241 960 aaPredicted RBP17.68■□□□□ 0.42
TMEM55B-207ENST00000557041 NKX2-3Q8TAU0 364 aa17.68■□□□□ 0.42
TMEM55B-207ENST00000557041 CACTINQ8WUQ7 758 aaKnown RBP17.68■□□□□ 0.42
TMEM55B-207ENST00000557041 CPLX3Q8WVH0 158 aa17.68■□□□□ 0.42
TMEM55B-207ENST00000557041 RNF41Q9H4P4 317 aaPredicted RBP17.68■□□□□ 0.42
TMEM55B-207ENST00000557041 GUCY1A2P33402 732 aa17.68■□□□□ 0.42
TMEM55B-207ENST00000557041 BRAPQ7Z569 592 aa17.68■□□□□ 0.42
TMEM55B-207ENST00000557041 CATIPQ7Z7H3 387 aa17.68■□□□□ 0.42
TMEM55B-207ENST00000557041 CCDC112Q8NEF3 446 aa17.68■□□□□ 0.42
TMEM55B-207ENST00000557041 ZBTB9Q96C00 473 aa17.68■□□□□ 0.42
TMEM55B-207ENST00000557041 NOL10Q9BSC4 688 aaKnown RBP17.68■□□□□ 0.42
TMEM55B-207ENST00000557041 G3V3G9 751 aa17.67■□□□□ 0.42
TMEM55B-207ENST00000557041 STX17P56962 302 aa17.67■□□□□ 0.42
TMEM55B-207ENST00000557041 DCAF8Q5TAQ9 597 aa17.67■□□□□ 0.42
TMEM55B-207ENST00000557041 MKNK2Q9HBH9 465 aa17.67■□□□□ 0.42
TMEM55B-207ENST00000557041 VAT1LQ9HCJ6 419 aa17.67■□□□□ 0.42
TMEM55B-207ENST00000557041 SPDYE4A6NLX3 237 aa17.67■□□□□ 0.42
TMEM55B-207ENST00000557041 SFPQP23246 707 aaKnown RBP eCLIP17.67■□□□□ 0.42
TMEM55B-207ENST00000557041 ATP2B2Q01814 1243 aa17.67■□□□□ 0.42
TMEM55B-207ENST00000557041 MCM9Q9NXL9 1143 aa17.67■□□□□ 0.42
TMEM55B-207ENST00000557041 KIAA1468Q9P260 1216 aa17.67■□□□□ 0.42
TMEM55B-207ENST00000557041 FBXO3Q9UK99 471 aa17.67■□□□□ 0.42
TMEM55B-207ENST00000557041 HPS5Q9UPZ3 1129 aa17.67■□□□□ 0.42
TMEM55B-207ENST00000557041 GOLGB1Q14789 3259 aaKnown RBP17.67■□□□□ 0.42
TMEM55B-207ENST00000557041 POLR2DO15514 142 aaKnown RBP17.67■□□□□ 0.42
TMEM55B-207ENST00000557041 CELF1Q92879 486 aaKnown RBP17.67■□□□□ 0.42
TMEM55B-207ENST00000557041 DHX58Q96C10 678 aa17.67■□□□□ 0.42
TMEM55B-207ENST00000557041 TMEM87BQ96K49 555 aa17.67■□□□□ 0.42
TMEM55B-207ENST00000557041 FUCA2Q9BTY2 467 aa17.67■□□□□ 0.42
TMEM55B-207ENST00000557041 CNNM2Q9H8M5 875 aa17.67■□□□□ 0.42
TMEM55B-207ENST00000557041 KDM4FA0A1W2PPD8 638 aa17.66■□□□□ 0.42
TMEM55B-207ENST00000557041 SH2B2O14492 632 aaPredicted RBP17.66■□□□□ 0.42
TMEM55B-207ENST00000557041 RFC4P35249 363 aa17.66■□□□□ 0.42
TMEM55B-207ENST00000557041 GOLGA8FQ08AF8 430 aa17.66■□□□□ 0.42
TMEM55B-207ENST00000557041 GOLGA8DPQ0D2H9 430 aa17.66■□□□□ 0.42
TMEM55B-207ENST00000557041 DHX8Q14562 1220 aaKnown RBP17.66■□□□□ 0.42
TMEM55B-207ENST00000557041 PARP10Q53GL7 1025 aa17.66■□□□□ 0.42
TMEM55B-207ENST00000557041 GRAMD1CQ8IYS0 662 aa17.66■□□□□ 0.42
TMEM55B-207ENST00000557041 KCNF1Q9H3M0 494 aa17.66■□□□□ 0.42
TMEM55B-207ENST00000557041 LRRC37A3O60309 1634 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms