RNA–Protein interactions for RNA: ENST00000556898.5

ATXN3-244, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 990 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-244ENST00000556898 KAT6BQ8WYB5 2073 aa6.73□□□□□ -1.33
ATXN3-244ENST00000556898 PXDNLA1KZ92 1463 aa6.73□□□□□ -1.33
ATXN3-244ENST00000556898 LAMB4A4D0S4 1761 aa6.73□□□□□ -1.33
ATXN3-244ENST00000556898 SLURP2P0DP57 97 aa6.73□□□□□ -1.33
ATXN3-244ENST00000556898 GYS1P13807 737 aa6.73□□□□□ -1.33
ATXN3-244ENST00000556898 VEGFAP15692 232 aaPredicted RBP6.73□□□□□ -1.33
ATXN3-244ENST00000556898 ATF7IPQ6VMQ6 1270 aa6.73□□□□□ -1.33
ATXN3-244ENST00000556898 ZBTB33Q86T24 672 aa6.73□□□□□ -1.33
ATXN3-244ENST00000556898 SLC10A4Q96EP9 437 aa6.73□□□□□ -1.33
ATXN3-244ENST00000556898 DDX21Q9NR30 783 aaKnown RBP eCLIP6.73□□□□□ -1.33
ATXN3-244ENST00000556898 DBF4Q9UBU7 674 aaPredicted RBP6.73□□□□□ -1.33
ATXN3-244ENST00000556898 SOS1Q07889 1333 aaPredicted RBP6.73□□□□□ -1.33
ATXN3-244ENST00000556898 LY75O60449 1722 aa6.73□□□□□ -1.33
ATXN3-244ENST00000556898 CDC14CA4D256 554 aa6.72□□□□□ -1.33
ATXN3-244ENST00000556898 APBB1O00213 710 aa6.72□□□□□ -1.33
ATXN3-244ENST00000556898 GPR37L1O60883 481 aa6.72□□□□□ -1.33
ATXN3-244ENST00000556898 RPS6KA4O75676 772 aa6.72□□□□□ -1.33
ATXN3-244ENST00000556898 CRKLP46109 303 aaKnown RBP6.72□□□□□ -1.33
ATXN3-244ENST00000556898 FKBP5Q13451 457 aaPredicted RBP6.72□□□□□ -1.33
ATXN3-244ENST00000556898 SLC4A10Q6U841 1118 aa6.72□□□□□ -1.33
ATXN3-244ENST00000556898 DZIP1LQ8IYY4 767 aaKnown RBP6.72□□□□□ -1.33
ATXN3-244ENST00000556898 ADAM32Q8TC27 787 aa6.72□□□□□ -1.33
ATXN3-244ENST00000556898 RNF217Q8TC41 542 aa6.72□□□□□ -1.33
ATXN3-244ENST00000556898 CUEDC1Q9NWM3 386 aaPredicted RBP6.72□□□□□ -1.33
ATXN3-244ENST00000556898 ABCC4O15439 1325 aa6.72□□□□□ -1.33
ATXN3-244ENST00000556898 KIF16BQ96L93 1317 aa6.72□□□□□ -1.33
ATXN3-244ENST00000556898 C10orf71Q711Q0 1435 aa6.71□□□□□ -1.34
ATXN3-244ENST00000556898 PI4KAP2A4QPH2 592 aa6.71□□□□□ -1.34
ATXN3-244ENST00000556898 GLTPD2A6NH11 291 aa6.71□□□□□ -1.34
ATXN3-244ENST00000556898 LILRA1O75019 489 aa6.71□□□□□ -1.34
ATXN3-244ENST00000556898 STARD3NLO95772 234 aa6.71□□□□□ -1.34
ATXN3-244ENST00000556898 DHX9Q08211 1270 aaKnown RBP6.71□□□□□ -1.34
ATXN3-244ENST00000556898 HLFQ16534 295 aa6.71□□□□□ -1.34
ATXN3-244ENST00000556898 FOXD4L5Q5VV16 416 aaPredicted RBP6.71□□□□□ -1.34
ATXN3-244ENST00000556898 SV2AQ7L0J3 742 aa6.71□□□□□ -1.34
ATXN3-244ENST00000556898 SVOPQ8N4V2 548 aa6.71□□□□□ -1.34
ATXN3-244ENST00000556898 PI4KAP1Q8N8J0 262 aa6.71□□□□□ -1.34
ATXN3-244ENST00000556898 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.71□□□□□ -1.34
ATXN3-244ENST00000556898 JARID2Q92833 1246 aaPredicted RBP6.71□□□□□ -1.34
ATXN3-244ENST00000556898 MYD88Q99836 296 aa6.71□□□□□ -1.34
ATXN3-244ENST00000556898 TEX13AQ9BXU3 409 aaPredicted RBP6.71□□□□□ -1.34
ATXN3-244ENST00000556898 API5Q9BZZ5 524 aaKnown RBP6.71□□□□□ -1.34
ATXN3-244ENST00000556898 POLMQ9NP87 494 aaPredicted RBP6.71□□□□□ -1.34
ATXN3-244ENST00000556898 HYPKQ9NX55 129 aa6.71□□□□□ -1.34
ATXN3-244ENST00000556898 CDV3Q9UKY7 258 aaKnown RBP6.71□□□□□ -1.34
ATXN3-244ENST00000556898 TBC1D2BQ9UPU7 963 aa6.71□□□□□ -1.34
ATXN3-244ENST00000556898 MAP3K2Q9Y2U5 619 aa6.71□□□□□ -1.34
ATXN3-244ENST00000556898 GPSM3Q9Y4H4 160 aa6.71□□□□□ -1.34
ATXN3-244ENST00000556898 PTPRCP08575 1304 aa6.71□□□□□ -1.34
ATXN3-244ENST00000556898 COL5A3P25940 1745 aaPredicted RBP6.7□□□□□ -1.34
ATXN3-244ENST00000556898 CICQ96RK0 1608 aaPredicted RBP6.7□□□□□ -1.34
ATXN3-244ENST00000556898 ATP5J2-PTCD1G3V325 749 aa6.7□□□□□ -1.34
ATXN3-244ENST00000556898 IPO8O15397 1037 aaKnown RBP6.7□□□□□ -1.34
ATXN3-244ENST00000556898 NEFLP07196 543 aa6.7□□□□□ -1.34
ATXN3-244ENST00000556898 LMNB1P20700 586 aa6.7□□□□□ -1.34
ATXN3-244ENST00000556898 EIF5P55010 431 aaKnown RBP6.7□□□□□ -1.34
ATXN3-244ENST00000556898 PDE3AQ14432 1141 aa6.7□□□□□ -1.34
ATXN3-244ENST00000556898 CWF19L2Q2TBE0 894 aaKnown RBP6.7□□□□□ -1.34
ATXN3-244ENST00000556898 KSR2Q6VAB6 950 aa6.7□□□□□ -1.34
ATXN3-244ENST00000556898 ITPRIPQ8IWB1 547 aa6.7□□□□□ -1.34
ATXN3-244ENST00000556898 FTSJ3Q8IY81 847 aaKnown RBP6.7□□□□□ -1.34
ATXN3-244ENST00000556898 DNAAF4Q8WXU2 420 aa6.7□□□□□ -1.34
ATXN3-244ENST00000556898 ARHGAP45Q92619 1136 aa6.7□□□□□ -1.34
ATXN3-244ENST00000556898 C1orf115Q9H7X2 142 aa6.7□□□□□ -1.34
ATXN3-244ENST00000556898 SRP68Q9UHB9 627 aaKnown RBP6.7□□□□□ -1.34
ATXN3-244ENST00000556898 CNTNAP4Q9C0A0 1308 aa6.7□□□□□ -1.34
ATXN3-244ENST00000556898 ERVH48-1M5A8F1 160 aa6.69□□□□□ -1.34
ATXN3-244ENST00000556898 IGKV5-2P06315 115 aa6.69□□□□□ -1.34
ATXN3-244ENST00000556898 CHRNA5P30532 468 aa6.69□□□□□ -1.34
ATXN3-244ENST00000556898 IRS1P35568 1242 aa6.69□□□□□ -1.34
ATXN3-244ENST00000556898 IL6STP40189 918 aaPredicted RBP6.69□□□□□ -1.34
ATXN3-244ENST00000556898 RAB15P59190 212 aa6.69□□□□□ -1.34
ATXN3-244ENST00000556898 PTK2Q05397 1052 aa6.69□□□□□ -1.34
ATXN3-244ENST00000556898 MVPQ14764 893 aaKnown RBP6.69□□□□□ -1.34
ATXN3-244ENST00000556898 BEND3Q5T5X7 828 aa6.69□□□□□ -1.34
ATXN3-244ENST00000556898 LYPD4Q6UWN0 246 aa6.69□□□□□ -1.34
ATXN3-244ENST00000556898 DZIP3Q86Y13 1208 aaKnown RBP6.69□□□□□ -1.34
ATXN3-244ENST00000556898 PRDM10Q9NQV6 1147 aa6.69□□□□□ -1.34
ATXN3-244ENST00000556898 NDUFB9Q9Y6M9 179 aa6.69□□□□□ -1.34
ATXN3-244ENST00000556898 C4BP0C0L5 1744 aa6.69□□□□□ -1.34
ATXN3-244ENST00000556898 TUBGCP6Q96RT7 1819 aa6.69□□□□□ -1.34
ATXN3-244ENST00000556898 COL15A1P39059 1388 aa6.69□□□□□ -1.34
ATXN3-244ENST00000556898 MYH14Q7Z406 1995 aaKnown RBP6.68□□□□□ -1.34
ATXN3-244ENST00000556898 ZBTB7BO15156 539 aaPredicted RBP6.68□□□□□ -1.34
ATXN3-244ENST00000556898 CAMTA2O94983 1202 aa6.68□□□□□ -1.34
ATXN3-244ENST00000556898 DDX58O95786 925 aaKnown RBP6.68□□□□□ -1.34
ATXN3-244ENST00000556898 GPTP24298 496 aa6.68□□□□□ -1.34
ATXN3-244ENST00000556898 TM4SF1P30408 202 aa6.68□□□□□ -1.34
ATXN3-244ENST00000556898 DDR1Q08345 913 aa6.68□□□□□ -1.34
ATXN3-244ENST00000556898 GAS6Q14393 721 aa6.68□□□□□ -1.34
ATXN3-244ENST00000556898 INTS3Q68E01 1043 aaKnown RBP6.68□□□□□ -1.34
ATXN3-244ENST00000556898 B4GALNT3Q6L9W6 998 aa6.68□□□□□ -1.34
ATXN3-244ENST00000556898 KIF6Q6ZMV9 814 aa6.68□□□□□ -1.34
ATXN3-244ENST00000556898 PLBD2Q8NHP8 589 aa6.68□□□□□ -1.34
ATXN3-244ENST00000556898 MEIS3Q99687 375 aa6.68□□□□□ -1.34
ATXN3-244ENST00000556898 METTL22Q9BUU2 404 aaPredicted RBP6.68□□□□□ -1.34
ATXN3-244ENST00000556898 MAP3K15Q6ZN16 1313 aa6.68□□□□□ -1.34
ATXN3-244ENST00000556898 ZNF831Q5JPB2 1677 aa6.68□□□□□ -1.34
ATXN3-244ENST00000556898 TAF1LQ8IZX4 1826 aa6.67□□□□□ -1.34
ATXN3-244ENST00000556898 FAM177BA6PVY3 158 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 499.8 ms