RNA–Protein interactions for RNA: ENST00000556718.1

PRPF39-210, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 499 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-210ENST00000556718 AOC2O75106 756 aa7.75□□□□□ -1.17
PRPF39-210ENST00000556718 B3GALT4O96024 378 aa7.75□□□□□ -1.17
PRPF39-210ENST00000556718 BNIP3Q12983 259 aa7.75□□□□□ -1.17
PRPF39-210ENST00000556718 OGFOD3Q6PK18 319 aa7.75□□□□□ -1.17
PRPF39-210ENST00000556718 PLCL1Q15111 1095 aa7.74□□□□□ -1.17
PRPF39-210ENST00000556718 ZNF792Q3KQV3 632 aa7.74□□□□□ -1.17
PRPF39-210ENST00000556718 KIAA0319Q5VV43 1072 aa7.74□□□□□ -1.17
PRPF39-210ENST00000556718 SLC5A6Q9Y289 635 aa7.74□□□□□ -1.17
PRPF39-210ENST00000556718 CARMIL2Q6F5E8 1435 aa7.74□□□□□ -1.17
PRPF39-210ENST00000556718 PDE3AQ14432 1141 aa7.73□□□□□ -1.17
PRPF39-210ENST00000556718 HP1BP3Q5SSJ5 553 aaPredicted RBP7.73□□□□□ -1.17
PRPF39-210ENST00000556718 ZNF648Q5T619 568 aaPredicted RBP7.73□□□□□ -1.17
PRPF39-210ENST00000556718 WDR89Q96FK6 387 aaPredicted RBP7.73□□□□□ -1.17
PRPF39-210ENST00000556718 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.73□□□□□ -1.17
PRPF39-210ENST00000556718 U3KQE9 123 aa7.73□□□□□ -1.17
PRPF39-210ENST00000556718 ZBTB7CA1YPR0 619 aa7.72□□□□□ -1.17
PRPF39-210ENST00000556718 PLD6Q8N2A8 252 aaKnown RBP7.72□□□□□ -1.17
PRPF39-210ENST00000556718 FAM181AQ8N9Y4 354 aa7.72□□□□□ -1.17
PRPF39-210ENST00000556718 ZFYVE1Q9HBF4 777 aa7.72□□□□□ -1.17
PRPF39-210ENST00000556718 LIG1P18858 919 aa7.71□□□□□ -1.18
PRPF39-210ENST00000556718 ITPKAP23677 461 aa7.71□□□□□ -1.18
PRPF39-210ENST00000556718 TRIM26Q12899 539 aaPredicted RBP7.71□□□□□ -1.18
PRPF39-210ENST00000556718 CDK5R2Q13319 367 aa7.71□□□□□ -1.18
PRPF39-210ENST00000556718 ORC1Q13415 861 aa7.71□□□□□ -1.18
PRPF39-210ENST00000556718 EHD4Q9H223 541 aa7.71□□□□□ -1.18
PRPF39-210ENST00000556718 NPHS2Q9NP85 383 aa7.71□□□□□ -1.18
PRPF39-210ENST00000556718 MTMR7Q9Y216 660 aa7.71□□□□□ -1.18
PRPF39-210ENST00000556718 TMPRSS2O15393 492 aa7.7□□□□□ -1.18
PRPF39-210ENST00000556718 FAM87AP0C7U9 286 aa7.7□□□□□ -1.18
PRPF39-210ENST00000556718 CD96P40200 585 aa7.7□□□□□ -1.18
PRPF39-210ENST00000556718 ZNF157P51786 506 aaPredicted RBP7.7□□□□□ -1.18
PRPF39-210ENST00000556718 ZNF124Q15973 351 aa7.7□□□□□ -1.18
PRPF39-210ENST00000556718 ECM1Q16610 540 aa7.7□□□□□ -1.18
PRPF39-210ENST00000556718 ZC3H12CQ9C0D7 883 aaKnown RBP7.7□□□□□ -1.18
PRPF39-210ENST00000556718 CCDC86Q9H6F5 360 aaKnown RBP7.7□□□□□ -1.18
PRPF39-210ENST00000556718 CD8BP10966 210 aa7.69□□□□□ -1.18
PRPF39-210ENST00000556718 DDX54Q8TDD1 881 aaKnown RBP7.69□□□□□ -1.18
PRPF39-210ENST00000556718 ABCB6Q9NP58 842 aa7.69□□□□□ -1.18
PRPF39-210ENST00000556718 CRIM1Q9NZV1 1036 aa7.69□□□□□ -1.18
PRPF39-210ENST00000556718 ADAMTS6Q9UKP5 1117 aa7.69□□□□□ -1.18
PRPF39-210ENST00000556718 ICMTO60725 284 aa7.68□□□□□ -1.18
PRPF39-210ENST00000556718 FAAP100Q0VG06 881 aa7.68□□□□□ -1.18
PRPF39-210ENST00000556718 CYP27C1Q4G0S4 372 aa7.68□□□□□ -1.18
PRPF39-210ENST00000556718 LCE4AQ5TA78 99 aa7.68□□□□□ -1.18
PRPF39-210ENST00000556718 STK11IPQ8N1F8 1099 aa7.68□□□□□ -1.18
PRPF39-210ENST00000556718 FANCD2OSQ96PS1 177 aa7.68□□□□□ -1.18
PRPF39-210ENST00000556718 MBNL3Q9NUK0 354 aaKnown RBP7.68□□□□□ -1.18
PRPF39-210ENST00000556718 ZNF862O60290 1169 aa7.67□□□□□ -1.18
PRPF39-210ENST00000556718 LEFTY1O75610 366 aa7.67□□□□□ -1.18
PRPF39-210ENST00000556718 RNASE1P07998 156 aaKnown RBP7.67□□□□□ -1.18
PRPF39-210ENST00000556718 FUT4P22083 530 aa7.67□□□□□ -1.18
PRPF39-210ENST00000556718 AP3B2Q13367 1082 aa7.67□□□□□ -1.18
PRPF39-210ENST00000556718 GLIS3Q8NEA6 775 aa7.67□□□□□ -1.18
PRPF39-210ENST00000556718 NETO1Q8TDF5 533 aa7.67□□□□□ -1.18
PRPF39-210ENST00000556718 KRTAP4-9Q9BYQ8 210 aa7.67□□□□□ -1.18
PRPF39-210ENST00000556718 BRPF3Q9ULD4 1205 aa7.67□□□□□ -1.18
PRPF39-210ENST00000556718 SYNGAP1Q96PV0 1343 aa7.67□□□□□ -1.18
PRPF39-210ENST00000556718 H3BRB1 525 aa7.66□□□□□ -1.18
PRPF39-210ENST00000556718 PPP1R15AO75807 674 aaPredicted RBP7.66□□□□□ -1.18
PRPF39-210ENST00000556718 SERPINB4P48594 390 aa7.66□□□□□ -1.18
PRPF39-210ENST00000556718 MISP3Q96FF7 219 aa7.66□□□□□ -1.18
PRPF39-210ENST00000556718 TUT1Q9H6E5 874 aaKnown RBP7.66□□□□□ -1.18
PRPF39-210ENST00000556718 RC3H2Q9HBD1 1191 aaKnown RBP7.66□□□□□ -1.18
PRPF39-210ENST00000556718 DISC1Q9NRI5 854 aa7.66□□□□□ -1.18
PRPF39-210ENST00000556718 BIN1O00499 593 aa7.65□□□□□ -1.18
PRPF39-210ENST00000556718 CPNE3O75131 537 aaKnown RBP7.65□□□□□ -1.18
PRPF39-210ENST00000556718 PTPN12Q05209 780 aaKnown RBP7.65□□□□□ -1.18
PRPF39-210ENST00000556718 PDE4CQ08493 712 aa7.65□□□□□ -1.18
PRPF39-210ENST00000556718 SMYD4Q8IYR2 804 aaPredicted RBP7.65□□□□□ -1.18
PRPF39-210ENST00000556718 PIDD1Q9HB75 910 aa7.65□□□□□ -1.18
PRPF39-210ENST00000556718 PCDHGC5Q9Y5F6 944 aa7.65□□□□□ -1.18
PRPF39-210ENST00000556718 TMEM238LA0A1B0GVL6 79 aa7.64□□□□□ -1.19
PRPF39-210ENST00000556718 ARHGAP4P98171 946 aa7.64□□□□□ -1.19
PRPF39-210ENST00000556718 ID3Q02535 119 aa7.64□□□□□ -1.19
PRPF39-210ENST00000556718 TTLL4Q14679 1199 aa7.64□□□□□ -1.19
PRPF39-210ENST00000556718 LRRN4CLQ8ND94 238 aa7.64□□□□□ -1.19
PRPF39-210ENST00000556718 FAM168AQ92567 244 aa7.64□□□□□ -1.19
PRPF39-210ENST00000556718 CCDC74AQ96AQ1 378 aa7.64□□□□□ -1.19
PRPF39-210ENST00000556718 FAM129BQ96TA1 746 aa7.64□□□□□ -1.19
PRPF39-210ENST00000556718 ATXN3LQ9H3M9 355 aa7.64□□□□□ -1.19
PRPF39-210ENST00000556718 EGFL7Q9UHF1 273 aa7.64□□□□□ -1.19
PRPF39-210ENST00000556718 RNGTTO60942 597 aaKnown RBP7.63□□□□□ -1.19
PRPF39-210ENST00000556718 HCLS1P14317 486 aaPredicted RBP7.63□□□□□ -1.19
PRPF39-210ENST00000556718 PRPF40BQ6NWY9 871 aaKnown RBP7.63□□□□□ -1.19
PRPF39-210ENST00000556718 ATG4DQ86TL0 474 aaPredicted RBP7.63□□□□□ -1.19
PRPF39-210ENST00000556718 PLAGL2Q9UPG8 496 aa7.63□□□□□ -1.19
PRPF39-210ENST00000556718 GADD45BO75293 160 aaPredicted RBP7.62□□□□□ -1.19
PRPF39-210ENST00000556718 IGHA2P01877 340 aa7.62□□□□□ -1.19
PRPF39-210ENST00000556718 NEFLP07196 543 aa7.62□□□□□ -1.19
PRPF39-210ENST00000556718 SLFN14P0C7P3 912 aa7.62□□□□□ -1.19
PRPF39-210ENST00000556718 PRKCQQ04759 706 aa7.62□□□□□ -1.19
PRPF39-210ENST00000556718 KIF4BQ2VIQ3 1234 aa7.62□□□□□ -1.19
PRPF39-210ENST00000556718 RPS26P11Q5JNZ5 115 aaPredicted RBP7.62□□□□□ -1.19
PRPF39-210ENST00000556718 GLYCTKQ8IVS8 523 aa7.62□□□□□ -1.19
PRPF39-210ENST00000556718 TRAIPQ9BWF2 469 aa7.62□□□□□ -1.19
PRPF39-210ENST00000556718 VAV3Q9UKW4 847 aa7.62□□□□□ -1.19
PRPF39-210ENST00000556718 EIF1AYO14602 144 aaKnown RBP7.61□□□□□ -1.19
PRPF39-210ENST00000556718 NEFMP07197 916 aa7.61□□□□□ -1.19
PRPF39-210ENST00000556718 GSTP1P09211 210 aaKnown RBP7.61□□□□□ -1.19
PRPF39-210ENST00000556718 RANGAP1P46060 587 aaPredicted RBP7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms