RNA–Protein interactions for RNA: ENST00000556671.5

ATXN3-243, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 921 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-243ENST00000556671 RNF43Q68DV7 783 aa7.18□□□□□ -1.26
ATXN3-243ENST00000556671 FDX2Q6P4F2 183 aa7.18□□□□□ -1.26
ATXN3-243ENST00000556671 ZDHHC13Q8IUH4 622 aa7.18□□□□□ -1.26
ATXN3-243ENST00000556671 GLYCTKQ8IVS8 523 aa7.18□□□□□ -1.26
ATXN3-243ENST00000556671 GALNT12Q8IXK2 581 aa7.18□□□□□ -1.26
ATXN3-243ENST00000556671 FAM83CQ9BQN1 747 aa7.18□□□□□ -1.26
ATXN3-243ENST00000556671 TMPRSS13Q9BYE2 586 aa7.18□□□□□ -1.26
ATXN3-243ENST00000556671 CFDP1Q9UEE9 299 aaPredicted RBP7.18□□□□□ -1.26
ATXN3-243ENST00000556671 BRPF3Q9ULD4 1205 aa7.18□□□□□ -1.26
ATXN3-243ENST00000556671 CCNB3Q8WWL7 1395 aa7.18□□□□□ -1.26
ATXN3-243ENST00000556671 VPS8Q8N3P4 1428 aa7.18□□□□□ -1.26
ATXN3-243ENST00000556671 COL17A1Q9UMD9 1497 aaPredicted RBP7.17□□□□□ -1.26
ATXN3-243ENST00000556671 METTL12A8MUP2 240 aa7.17□□□□□ -1.26
ATXN3-243ENST00000556671 TGFB1P01137 390 aa7.17□□□□□ -1.26
ATXN3-243ENST00000556671 SSTR4P31391 388 aa7.17□□□□□ -1.26
ATXN3-243ENST00000556671 HNRNPMP52272 730 aaKnown RBP eCLIP7.17□□□□□ -1.26
ATXN3-243ENST00000556671 ARHGAP4P98171 946 aa7.17□□□□□ -1.26
ATXN3-243ENST00000556671 DBNDD2Q9BQY9 259 aa7.17□□□□□ -1.26
ATXN3-243ENST00000556671 PCMTD2Q9NV79 361 aa7.17□□□□□ -1.26
ATXN3-243ENST00000556671 RICTORQ6R327 1708 aa7.17□□□□□ -1.26
ATXN3-243ENST00000556671 PLCH2O75038 1416 aa7.17□□□□□ -1.26
ATXN3-243ENST00000556671 SCAPERQ9BY12 1400 aa7.17□□□□□ -1.26
ATXN3-243ENST00000556671 ITSN2Q9NZM3 1697 aa7.16□□□□□ -1.26
ATXN3-243ENST00000556671 LOC100289279A0A1B0GTE1 492 aa7.16□□□□□ -1.26
ATXN3-243ENST00000556671 A0A1W2PP55 124 aa7.16□□□□□ -1.26
ATXN3-243ENST00000556671 MLECQ14165 292 aa7.16□□□□□ -1.26
ATXN3-243ENST00000556671 BEND4Q6ZU67 534 aa7.16□□□□□ -1.26
ATXN3-243ENST00000556671 CCNJLQ8IV13 435 aa7.16□□□□□ -1.26
ATXN3-243ENST00000556671 AFAP1Q8N556 730 aa7.16□□□□□ -1.26
ATXN3-243ENST00000556671 SMG8Q8ND04 991 aaKnown RBP7.16□□□□□ -1.26
ATXN3-243ENST00000556671 TCF12Q99081 682 aa7.16□□□□□ -1.26
ATXN3-243ENST00000556671 USP26Q9BXU7 913 aa7.16□□□□□ -1.26
ATXN3-243ENST00000556671 KCNF1Q9H3M0 494 aa7.16□□□□□ -1.26
ATXN3-243ENST00000556671 SUGCTQ9HAC7 445 aa7.16□□□□□ -1.26
ATXN3-243ENST00000556671 CFAP65Q6ZU64 1925 aaKnown RBP7.16□□□□□ -1.26
ATXN3-243ENST00000556671 PHLDB1Q86UU1 1377 aa7.16□□□□□ -1.26
ATXN3-243ENST00000556671 DENND4BO75064 1496 aaPredicted RBP7.16□□□□□ -1.26
ATXN3-243ENST00000556671 ADGRL1O94910 1474 aa7.16□□□□□ -1.26
ATXN3-243ENST00000556671 NEO1Q92859 1461 aa7.16□□□□□ -1.26
ATXN3-243ENST00000556671 TIAM1Q13009 1591 aa7.16□□□□□ -1.26
ATXN3-243ENST00000556671 PREX2Q70Z35 1606 aa7.16□□□□□ -1.26
ATXN3-243ENST00000556671 A0A096LPE4 126 aa7.15□□□□□ -1.26
ATXN3-243ENST00000556671 A0A1W2PPZ6 126 aa7.15□□□□□ -1.26
ATXN3-243ENST00000556671 KIAA1324LA8MWY0 1029 aaPredicted RBP7.15□□□□□ -1.26
ATXN3-243ENST00000556671 COBLO75128 1261 aa7.15□□□□□ -1.26
ATXN3-243ENST00000556671 MED26O95402 600 aa7.15□□□□□ -1.26
ATXN3-243ENST00000556671 TIAF1O95411 115 aa7.15□□□□□ -1.26
ATXN3-243ENST00000556671 DLGAP3O95886 979 aa7.15□□□□□ -1.26
ATXN3-243ENST00000556671 NUTM2GQ5VZR2 741 aa7.15□□□□□ -1.26
ATXN3-243ENST00000556671 TXNDC2Q86VQ3 553 aa7.15□□□□□ -1.26
ATXN3-243ENST00000556671 FAM129BQ96TA1 746 aa7.15□□□□□ -1.26
ATXN3-243ENST00000556671 NRSN2Q9GZP1 204 aa7.15□□□□□ -1.26
ATXN3-243ENST00000556671 ARAP3Q8WWN8 1544 aa7.15□□□□□ -1.27
ATXN3-243ENST00000556671 PRR19A6NJB7 356 aa7.14□□□□□ -1.27
ATXN3-243ENST00000556671 NDUFB5O43674 189 aa7.14□□□□□ -1.27
ATXN3-243ENST00000556671 GAS2O43903 313 aaKnown RBP7.14□□□□□ -1.27
ATXN3-243ENST00000556671 EIF4EBP3O60516 100 aaPredicted RBP7.14□□□□□ -1.27
ATXN3-243ENST00000556671 NEFLP07196 543 aa7.14□□□□□ -1.27
ATXN3-243ENST00000556671 GRIA4P48058 902 aa7.14□□□□□ -1.27
ATXN3-243ENST00000556671 GSTM4Q03013 218 aa7.14□□□□□ -1.27
ATXN3-243ENST00000556671 USPL1Q5W0Q7 1092 aa7.14□□□□□ -1.27
ATXN3-243ENST00000556671 CLEC4MQ9H2X3 399 aaPredicted RBP7.14□□□□□ -1.27
ATXN3-243ENST00000556671 LIN7BQ9HAP6 207 aa7.14□□□□□ -1.27
ATXN3-243ENST00000556671 CYP4F12Q9HCS2 524 aa7.14□□□□□ -1.27
ATXN3-243ENST00000556671 EHBP1L1Q8N3D4 1523 aa7.13□□□□□ -1.27
ATXN3-243ENST00000556671 ZNF644Q9H582 1327 aaPredicted RBP7.13□□□□□ -1.27
ATXN3-243ENST00000556671 PCDH1Q08174 1060 aa7.13□□□□□ -1.27
ATXN3-243ENST00000556671 PDE3BQ13370 1112 aa7.13□□□□□ -1.27
ATXN3-243ENST00000556671 SPRED3Q2MJR0 410 aa7.13□□□□□ -1.27
ATXN3-243ENST00000556671 SGO2Q562F6 1265 aa7.13□□□□□ -1.27
ATXN3-243ENST00000556671 EXOSC6Q5RKV6 272 aaKnown RBP7.13□□□□□ -1.27
ATXN3-243ENST00000556671 KIAA0319Q5VV43 1072 aa7.13□□□□□ -1.27
ATXN3-243ENST00000556671 C12orf50Q8NA57 414 aaPredicted RBP7.13□□□□□ -1.27
ATXN3-243ENST00000556671 CITED4Q96RK1 184 aa7.13□□□□□ -1.27
ATXN3-243ENST00000556671 GPATCH8Q9UKJ3 1502 aaKnown RBP7.12□□□□□ -1.27
ATXN3-243ENST00000556671 LRRC9Q6ZRR7 1453 aa7.12□□□□□ -1.27
ATXN3-243ENST00000556671 IGHA2P01877 340 aa7.12□□□□□ -1.27
ATXN3-243ENST00000556671 MAP4P27816 1152 aaKnown RBP7.12□□□□□ -1.27
ATXN3-243ENST00000556671 ZNF423Q2M1K9 1284 aa7.12□□□□□ -1.27
ATXN3-243ENST00000556671 INTS5Q6P9B9 1019 aaKnown RBP7.12□□□□□ -1.27
ATXN3-243ENST00000556671 RETREG2Q8NC44 543 aa7.12□□□□□ -1.27
ATXN3-243ENST00000556671 SHKBP1Q8TBC3 707 aa7.12□□□□□ -1.27
ATXN3-243ENST00000556671 ARID3AQ99856 593 aa7.12□□□□□ -1.27
ATXN3-243ENST00000556671 NCOA2Q15596 1464 aa7.11□□□□□ -1.27
ATXN3-243ENST00000556671 CPNE3O75131 537 aaKnown RBP7.11□□□□□ -1.27
ATXN3-243ENST00000556671 GRIK1P39086 918 aa7.11□□□□□ -1.27
ATXN3-243ENST00000556671 ORC1Q13415 861 aa7.11□□□□□ -1.27
ATXN3-243ENST00000556671 FAM50AQ14320 339 aaKnown RBP7.11□□□□□ -1.27
ATXN3-243ENST00000556671 NPHS2Q9NP85 383 aa7.11□□□□□ -1.27
ATXN3-243ENST00000556671 SAMD9LQ8IVG5 1584 aa7.11□□□□□ -1.27
ATXN3-243ENST00000556671 SPAG9O60271 1321 aaKnown RBP7.1□□□□□ -1.27
ATXN3-243ENST00000556671 TSPY4P0CV99 314 aa7.1□□□□□ -1.27
ATXN3-243ENST00000556671 TSPY10P0CW01 314 aa7.1□□□□□ -1.27
ATXN3-243ENST00000556671 DRD2P14416 443 aa7.1□□□□□ -1.27
ATXN3-243ENST00000556671 SPINK2P20155 84 aa7.1□□□□□ -1.27
ATXN3-243ENST00000556671 ITGAEP38570 1179 aa7.1□□□□□ -1.27
ATXN3-243ENST00000556671 FRMPD1Q5SYB0 1578 aa7.1□□□□□ -1.27
ATXN3-243ENST00000556671 GPR182O15218 404 aa7.09□□□□□ -1.27
ATXN3-243ENST00000556671 CYP11A1P05108 521 aa7.09□□□□□ -1.27
ATXN3-243ENST00000556671 CTSBP07858 339 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms