RNA–Protein interactions for RNA: ENST00000556284.1

MTHFD1-213, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 5

Gene MTHFD1, Length 932 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-213ENST00000556284 RFX7Q2KHR2 1363 aa12.14□□□□□ -0.47
MTHFD1-213ENST00000556284 ZC3H4Q9UPT8 1303 aaKnown RBP12.13□□□□□ -0.47
MTHFD1-213ENST00000556284 AKAP11Q9UKA4 1901 aa12.13□□□□□ -0.47
MTHFD1-213ENST00000556284 RNF113AO15541 343 aaKnown RBP12.13□□□□□ -0.47
MTHFD1-213ENST00000556284 CDC45O75419 566 aa12.13□□□□□ -0.47
MTHFD1-213ENST00000556284 RPS12P25398 132 aaKnown RBP12.13□□□□□ -0.47
MTHFD1-213ENST00000556284 MMP14P50281 582 aa12.13□□□□□ -0.47
MTHFD1-213ENST00000556284 GSTO1P78417 241 aa12.13□□□□□ -0.47
MTHFD1-213ENST00000556284 SLC9C2Q5TAH2 1124 aa12.13□□□□□ -0.47
MTHFD1-213ENST00000556284 SLF2Q8IX21 1173 aa12.13□□□□□ -0.47
MTHFD1-213ENST00000556284 CERS5Q8N5B7 392 aa12.13□□□□□ -0.47
MTHFD1-213ENST00000556284 GMLQ99445 158 aa12.13□□□□□ -0.47
MTHFD1-213ENST00000556284 LARP6Q9BRS8 491 aaKnown RBP12.13□□□□□ -0.47
MTHFD1-213ENST00000556284 MRIQ9BWK5 157 aa12.13□□□□□ -0.47
MTHFD1-213ENST00000556284 MAST3O60307 1309 aa12.12□□□□□ -0.47
MTHFD1-213ENST00000556284 LDHCP07864 332 aa12.12□□□□□ -0.47
MTHFD1-213ENST00000556284 PDE6AP16499 860 aa12.12□□□□□ -0.47
MTHFD1-213ENST00000556284 CHMLP26374 656 aa12.12□□□□□ -0.47
MTHFD1-213ENST00000556284 PRDX5P30044 214 aa12.12□□□□□ -0.47
MTHFD1-213ENST00000556284 ADD2P35612 726 aa12.12□□□□□ -0.47
MTHFD1-213ENST00000556284 HDLBPQ00341 1268 aaKnown RBP12.12□□□□□ -0.47
MTHFD1-213ENST00000556284 MECOMQ03112 1051 aa12.12□□□□□ -0.47
MTHFD1-213ENST00000556284 UBE3CQ15386 1083 aa12.12□□□□□ -0.47
MTHFD1-213ENST00000556284 NAA16Q6N069 864 aaPredicted RBP12.12□□□□□ -0.47
MTHFD1-213ENST00000556284 CASC1Q6TDU7 716 aa12.12□□□□□ -0.47
MTHFD1-213ENST00000556284 DZIP1Q86YF9 867 aaKnown RBP12.12□□□□□ -0.47
MTHFD1-213ENST00000556284 NSUN4Q96CB9 384 aaKnown RBP12.12□□□□□ -0.47
MTHFD1-213ENST00000556284 GRIK5Q16478 980 aa12.11□□□□□ -0.47
MTHFD1-213ENST00000556284 GPC2Q8N158 579 aa12.11□□□□□ -0.47
MTHFD1-213ENST00000556284 MAGEB6Q8N7X4 407 aa12.11□□□□□ -0.47
MTHFD1-213ENST00000556284 RUFY2Q8WXA3 655 aa12.11□□□□□ -0.47
MTHFD1-213ENST00000556284 DPF2Q92785 391 aa12.11□□□□□ -0.47
MTHFD1-213ENST00000556284 FAM163AQ96GL9 167 aaPredicted RBP12.11□□□□□ -0.47
MTHFD1-213ENST00000556284 MXD3Q9BW11 206 aa12.11□□□□□ -0.47
MTHFD1-213ENST00000556284 DIAPH3Q9NSV4 1193 aa12.11□□□□□ -0.47
MTHFD1-213ENST00000556284 HDAC9Q9UKV0 1011 aa12.11□□□□□ -0.47
MTHFD1-213ENST00000556284 TTF2Q9UNY4 1162 aaKnown RBP12.11□□□□□ -0.47
MTHFD1-213ENST00000556284 CHD4Q14839 1912 aa12.11□□□□□ -0.47
MTHFD1-213ENST00000556284 TCRBV5S4A2TA0A5A2 114 aa12.1□□□□□ -0.47
MTHFD1-213ENST00000556284 EIF5BO60841 1220 aaKnown RBP12.1□□□□□ -0.47
MTHFD1-213ENST00000556284 USP17L8P0C7I0 530 aa12.1□□□□□ -0.47
MTHFD1-213ENST00000556284 CYP7A1P22680 504 aa12.1□□□□□ -0.47
MTHFD1-213ENST00000556284 ZMYM1Q5SVZ6 1142 aa12.1□□□□□ -0.47
MTHFD1-213ENST00000556284 HHIPL2Q6UWX4 724 aa12.1□□□□□ -0.47
MTHFD1-213ENST00000556284 OGFOD1Q8N543 542 aa12.1□□□□□ -0.47
MTHFD1-213ENST00000556284 TMC2Q8TDI7 906 aa12.1□□□□□ -0.47
MTHFD1-213ENST00000556284 APPBP2Q92624 585 aa12.1□□□□□ -0.47
MTHFD1-213ENST00000556284 GPHNQ9NQX3 736 aaPredicted RBP12.1□□□□□ -0.47
MTHFD1-213ENST00000556284 HELLSQ9NRZ9 838 aa12.1□□□□□ -0.47
MTHFD1-213ENST00000556284 SERPINA10Q9UK55 444 aa12.1□□□□□ -0.47
MTHFD1-213ENST00000556284 GJA3Q9Y6H8 435 aa12.1□□□□□ -0.47
MTHFD1-213ENST00000556284 ZNF541Q9H0D2 1346 aa12.1□□□□□ -0.47
MTHFD1-213ENST00000556284 ZNF532Q9HCE3 1301 aa12.1□□□□□ -0.47
MTHFD1-213ENST00000556284 SCN9AQ15858 1988 aa12.09□□□□□ -0.47
MTHFD1-213ENST00000556284 SBF1O95248 1867 aa12.09□□□□□ -0.47
MTHFD1-213ENST00000556284 F8W031 263 aaPredicted RBP12.09□□□□□ -0.47
MTHFD1-213ENST00000556284 NMIQ13287 307 aaPredicted RBP12.09□□□□□ -0.47
MTHFD1-213ENST00000556284 CERS3Q8IU89 383 aa12.09□□□□□ -0.47
MTHFD1-213ENST00000556284 KIAA0825Q8IV33 1275 aa12.09□□□□□ -0.47
MTHFD1-213ENST00000556284 ZNF384Q8TF68 577 aa12.09□□□□□ -0.47
MTHFD1-213ENST00000556284 TEKT1Q969V4 418 aa12.09□□□□□ -0.47
MTHFD1-213ENST00000556284 DDX27Q96GQ7 796 aaKnown RBP12.09□□□□□ -0.47
MTHFD1-213ENST00000556284 GOLGB1Q14789 3259 aaKnown RBP12.08□□□□□ -0.48
MTHFD1-213ENST00000556284 BAG3O95817 575 aa12.08□□□□□ -0.48
MTHFD1-213ENST00000556284 GMPSP49915 693 aaPredicted RBP12.08□□□□□ -0.48
MTHFD1-213ENST00000556284 MFAP1P55081 439 aaKnown RBP12.08□□□□□ -0.48
MTHFD1-213ENST00000556284 ZNF280AP59817 542 aaPredicted RBP12.08□□□□□ -0.48
MTHFD1-213ENST00000556284 PPP4CP60510 307 aa12.08□□□□□ -0.48
MTHFD1-213ENST00000556284 MFSD10Q14728 455 aa12.08□□□□□ -0.48
MTHFD1-213ENST00000556284 MCMDC2Q4G0Z9 681 aa12.08□□□□□ -0.48
MTHFD1-213ENST00000556284 CWC27Q6UX04 472 aaKnown RBP12.08□□□□□ -0.48
MTHFD1-213ENST00000556284 OSBP2Q969R2 916 aa12.08□□□□□ -0.48
MTHFD1-213ENST00000556284 FAM227BQ96M60 508 aa12.08□□□□□ -0.48
MTHFD1-213ENST00000556284 NOL10Q9BSC4 688 aaKnown RBP12.08□□□□□ -0.48
MTHFD1-213ENST00000556284 MROH7-TTC4A0A0A0MT08 1334 aa12.08□□□□□ -0.48
MTHFD1-213ENST00000556284 GAKO14976 1311 aa12.08□□□□□ -0.48
MTHFD1-213ENST00000556284 RAD50Q92878 1312 aa12.08□□□□□ -0.48
MTHFD1-213ENST00000556284 MYH13Q9UKX3 1938 aa12.07□□□□□ -0.48
MTHFD1-213ENST00000556284 DICER1Q9UPY3 1922 aaKnown RBP12.07□□□□□ -0.48
MTHFD1-213ENST00000556284 GPR75-ASB3A0A0A6YYF3 556 aa12.07□□□□□ -0.48
MTHFD1-213ENST00000556284 A0A0D9SFI3 127 aa12.07□□□□□ -0.48
MTHFD1-213ENST00000556284 GLTPD2A6NH11 291 aa12.07□□□□□ -0.48
MTHFD1-213ENST00000556284 CHGBP05060 677 aa12.07□□□□□ -0.48
MTHFD1-213ENST00000556284 CRKP46108 304 aa12.07□□□□□ -0.48
MTHFD1-213ENST00000556284 SCNN1DP51172 638 aa12.07□□□□□ -0.48
MTHFD1-213ENST00000556284 DIXDC1Q155Q3 683 aa12.07□□□□□ -0.48
MTHFD1-213ENST00000556284 SLFNL1Q499Z3 407 aa12.07□□□□□ -0.48
MTHFD1-213ENST00000556284 MTMR14Q8NCE2 650 aa12.07□□□□□ -0.48
MTHFD1-213ENST00000556284 ZDHHC15Q96MV8 337 aa12.07□□□□□ -0.48
MTHFD1-213ENST00000556284 ESYT1Q9BSJ8 1104 aa12.07□□□□□ -0.48
MTHFD1-213ENST00000556284 PUS7LQ9H0K6 701 aaKnown RBP12.07□□□□□ -0.48
MTHFD1-213ENST00000556284 CNOT7Q9UIV1 285 aaKnown RBP12.07□□□□□ -0.48
MTHFD1-213ENST00000556284 CCDC88AQ3V6T2 1871 aa12.06□□□□□ -0.48
MTHFD1-213ENST00000556284 MAGEB6P1A0A0J9YX57 407 aa12.06□□□□□ -0.48
MTHFD1-213ENST00000556284 H7C1D1 291 aa12.06□□□□□ -0.48
MTHFD1-213ENST00000556284 SGSM2O43147 1006 aa12.06□□□□□ -0.48
MTHFD1-213ENST00000556284 DDNO94850 711 aaPredicted RBP12.06□□□□□ -0.48
MTHFD1-213ENST00000556284 C8orf34Q49A92 452 aa12.06□□□□□ -0.48
MTHFD1-213ENST00000556284 ADGRA1Q86SQ6 560 aa12.06□□□□□ -0.48
MTHFD1-213ENST00000556284 AIDAQ96BJ3 306 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms