RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 PRR7Q8TB68 274 aa9.97□□□□□ -0.81
ATXN3-235ENST00000556082 INTS4Q96HW7 963 aaKnown RBP9.97□□□□□ -0.81
ATXN3-235ENST00000556082 FSD1Q9BTV5 496 aa9.97□□□□□ -0.81
ATXN3-235ENST00000556082 PUS3Q9BZE2 481 aaKnown RBP9.97□□□□□ -0.81
ATXN3-235ENST00000556082 DACH1Q9UI36 760 aa9.97□□□□□ -0.81
ATXN3-235ENST00000556082 SNX14Q9Y5W7 946 aa9.97□□□□□ -0.81
ATXN3-235ENST00000556082 CCDC171Q6TFL3 1326 aa9.97□□□□□ -0.81
ATXN3-235ENST00000556082 MED23Q9ULK4 1368 aa9.97□□□□□ -0.81
ATXN3-235ENST00000556082 ZNF609O15014 1411 aa9.97□□□□□ -0.81
ATXN3-235ENST00000556082 SIAH2O43255 324 aa9.96□□□□□ -0.82
ATXN3-235ENST00000556082 FRAT2O75474 233 aaPredicted RBP9.96□□□□□ -0.82
ATXN3-235ENST00000556082 HSP90AA1P07900 732 aaKnown RBP9.96□□□□□ -0.82
ATXN3-235ENST00000556082 ITGA6P23229 1130 aa9.96□□□□□ -0.82
ATXN3-235ENST00000556082 HSPA1LP34931 641 aa9.96□□□□□ -0.82
ATXN3-235ENST00000556082 RAB3GAP1Q15042 981 aa9.96□□□□□ -0.82
ATXN3-235ENST00000556082 TAF7LQ5H9L4 462 aa9.96□□□□□ -0.82
ATXN3-235ENST00000556082 CCDC158Q5M9N0 1113 aa9.96□□□□□ -0.82
ATXN3-235ENST00000556082 PRPF38BQ5VTL8 546 aaKnown RBP9.96□□□□□ -0.82
ATXN3-235ENST00000556082 USPL1Q5W0Q7 1092 aa9.96□□□□□ -0.82
ATXN3-235ENST00000556082 TREML4Q6UXN2 200 aa9.96□□□□□ -0.82
ATXN3-235ENST00000556082 PARP9Q8IXQ6 854 aa9.96□□□□□ -0.82
ATXN3-235ENST00000556082 SYNE4Q8N205 404 aa9.96□□□□□ -0.82
ATXN3-235ENST00000556082 LINC00116Q8NCU8 138 aa9.96□□□□□ -0.82
ATXN3-235ENST00000556082 EHBP1Q8NDI1 1231 aa9.96□□□□□ -0.82
ATXN3-235ENST00000556082 NEUROD6Q96NK8 337 aa9.96□□□□□ -0.82
ATXN3-235ENST00000556082 GREM2Q9H772 168 aa9.96□□□□□ -0.82
ATXN3-235ENST00000556082 GMPR2Q9P2T1 348 aaKnown RBP9.96□□□□□ -0.82
ATXN3-235ENST00000556082 TRPC5Q9UL62 973 aaPredicted RBP9.96□□□□□ -0.82
ATXN3-235ENST00000556082 ATRNO75882 1429 aa9.96□□□□□ -0.82
ATXN3-235ENST00000556082 SPTLC1O15269 473 aa9.95□□□□□ -0.82
ATXN3-235ENST00000556082 TAF5LO75529 589 aa9.95□□□□□ -0.82
ATXN3-235ENST00000556082 RPS6KA4O75676 772 aa9.95□□□□□ -0.82
ATXN3-235ENST00000556082 ZKSCAN1P17029 563 aaPredicted RBP9.95□□□□□ -0.82
ATXN3-235ENST00000556082 NUCB2P80303 420 aa9.95□□□□□ -0.82
ATXN3-235ENST00000556082 PTH1RQ03431 593 aa9.95□□□□□ -0.82
ATXN3-235ENST00000556082 LRRFIP1Q32MZ4 808 aaKnown RBP9.95□□□□□ -0.82
ATXN3-235ENST00000556082 SLC10A5Q5PT55 438 aa9.95□□□□□ -0.82
ATXN3-235ENST00000556082 RNF20Q5VTR2 975 aa9.95□□□□□ -0.82
ATXN3-235ENST00000556082 RSBN1LQ6PCB5 846 aaPredicted RBP9.95□□□□□ -0.82
ATXN3-235ENST00000556082 LDHAL6AQ6ZMR3 332 aa9.95□□□□□ -0.82
ATXN3-235ENST00000556082 MPNDQ8N594 471 aa9.95□□□□□ -0.82
ATXN3-235ENST00000556082 VGLL2Q8N8G2 317 aa9.95□□□□□ -0.82
ATXN3-235ENST00000556082 KIFC2Q96AC6 838 aa9.95□□□□□ -0.82
ATXN3-235ENST00000556082 FAM227BQ96M60 508 aa9.95□□□□□ -0.82
ATXN3-235ENST00000556082 TTC14Q96N46 770 aa9.95□□□□□ -0.82
ATXN3-235ENST00000556082 ALDH8A1Q9H2A2 487 aaPredicted RBP9.95□□□□□ -0.82
ATXN3-235ENST00000556082 HELLSQ9NRZ9 838 aa9.95□□□□□ -0.82
ATXN3-235ENST00000556082 PAG1Q9NWQ8 432 aa9.95□□□□□ -0.82
ATXN3-235ENST00000556082 HMG20BQ9P0W2 317 aa9.95□□□□□ -0.82
ATXN3-235ENST00000556082 MROH5Q6ZUA9 1318 aa9.95□□□□□ -0.82
ATXN3-235ENST00000556082 ANKRD36CQ5JPF3 1778 aa9.94□□□□□ -0.82
ATXN3-235ENST00000556082 A0A0D9SFI3 127 aa9.94□□□□□ -0.82
ATXN3-235ENST00000556082 PDE8BO95263 885 aa9.94□□□□□ -0.82
ATXN3-235ENST00000556082 NTSR2O95665 410 aa9.94□□□□□ -0.82
ATXN3-235ENST00000556082 ALDH1A1P00352 501 aa9.94□□□□□ -0.82
ATXN3-235ENST00000556082 ZFYP08048 801 aaPredicted RBP9.94□□□□□ -0.82
ATXN3-235ENST00000556082 HMGB2P26583 209 aaKnown RBP9.94□□□□□ -0.82
ATXN3-235ENST00000556082 SSFA2P28290 1259 aa9.94□□□□□ -0.82
ATXN3-235ENST00000556082 MCM4P33991 863 aa9.94□□□□□ -0.82
ATXN3-235ENST00000556082 MCMDC2Q4G0Z9 681 aa9.94□□□□□ -0.82
ATXN3-235ENST00000556082 MEX3CQ5U5Q3 659 aaKnown RBP9.94□□□□□ -0.82
ATXN3-235ENST00000556082 VPS53Q5VIR6 699 aa9.94□□□□□ -0.82
ATXN3-235ENST00000556082 HPS1Q92902 700 aa9.94□□□□□ -0.82
ATXN3-235ENST00000556082 XAGE2Q96GT9 111 aa9.94□□□□□ -0.82
ATXN3-235ENST00000556082 TMX3Q96JJ7 454 aa9.94□□□□□ -0.82
ATXN3-235ENST00000556082 ATP13A2Q9NQ11 1180 aa9.94□□□□□ -0.82
ATXN3-235ENST00000556082 NARFQ9UHQ1 456 aa9.94□□□□□ -0.82
ATXN3-235ENST00000556082 NIP7Q9Y221 180 aaKnown RBP eCLIP9.94□□□□□ -0.82
ATXN3-235ENST00000556082 AFF2P51816 1311 aa9.93□□□□□ -0.82
ATXN3-235ENST00000556082 CYP2E1P05181 493 aaPredicted RBP9.93□□□□□ -0.82
ATXN3-235ENST00000556082 IFIT1P09914 478 aaKnown RBP9.93□□□□□ -0.82
ATXN3-235ENST00000556082 PTMSP20962 102 aa9.93□□□□□ -0.82
ATXN3-235ENST00000556082 PSMA5P28066 241 aa9.93□□□□□ -0.82
ATXN3-235ENST00000556082 SF3B3Q15393 1217 aaKnown RBP9.93□□□□□ -0.82
ATXN3-235ENST00000556082 ATP2B3Q16720 1220 aa9.93□□□□□ -0.82
ATXN3-235ENST00000556082 CCDC152Q4G0S7 254 aa9.93□□□□□ -0.82
ATXN3-235ENST00000556082 METTL24Q5JXM2 366 aa9.93□□□□□ -0.82
ATXN3-235ENST00000556082 ZMYM1Q5SVZ6 1142 aa9.93□□□□□ -0.82
ATXN3-235ENST00000556082 CREB3L3Q68CJ9 461 aa9.93□□□□□ -0.82
ATXN3-235ENST00000556082 LYPD8Q6UX82 237 aa9.93□□□□□ -0.82
ATXN3-235ENST00000556082 UNC93B1Q9H1C4 597 aa9.93□□□□□ -0.82
ATXN3-235ENST00000556082 CNNM1Q9NRU3 951 aa9.93□□□□□ -0.82
ATXN3-235ENST00000556082 RBM8AQ9Y5S9 174 aaKnown RBP9.93□□□□□ -0.82
ATXN3-235ENST00000556082 NUP98P52948 1817 aa9.93□□□□□ -0.82
ATXN3-235ENST00000556082 RIC1Q4ADV7 1423 aa9.92□□□□□ -0.82
ATXN3-235ENST00000556082 AK9Q5TCS8 1911 aa9.92□□□□□ -0.82
ATXN3-235ENST00000556082 SPEF2Q9C093 1822 aa9.92□□□□□ -0.82
ATXN3-235ENST00000556082 GOLIM4O00461 696 aa9.92□□□□□ -0.82
ATXN3-235ENST00000556082 SLC27A2O14975 620 aa9.92□□□□□ -0.82
ATXN3-235ENST00000556082 RNF113AO15541 343 aaKnown RBP9.92□□□□□ -0.82
ATXN3-235ENST00000556082 FGFR2P21802 821 aa9.92□□□□□ -0.82
ATXN3-235ENST00000556082 VARSP26640 1264 aaKnown RBP9.92□□□□□ -0.82
ATXN3-235ENST00000556082 SH3BP2P78314 561 aa9.92□□□□□ -0.82
ATXN3-235ENST00000556082 KRT32Q14532 448 aa9.92□□□□□ -0.82
ATXN3-235ENST00000556082 TUSC1Q2TAM9 212 aa9.92□□□□□ -0.82
ATXN3-235ENST00000556082 GORABQ5T7V8 394 aa9.92□□□□□ -0.82
ATXN3-235ENST00000556082 LPIN2Q92539 896 aa9.92□□□□□ -0.82
ATXN3-235ENST00000556082 TNPO1Q92973 898 aaKnown RBP9.92□□□□□ -0.82
ATXN3-235ENST00000556082 EDC3Q96F86 508 aaKnown RBP9.92□□□□□ -0.82
ATXN3-235ENST00000556082 GBP4Q96PP9 640 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms