RNA–Protein interactions for RNA: ENST00000556054.5

APEX1-212, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 3

Gene APEX1, Length 773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-212ENST00000556054 DIXDC1Q155Q3 683 aa14.37□□□□□ -0.11
APEX1-212ENST00000556054 ANO2Q9NQ90 1003 aa14.37□□□□□ -0.11
APEX1-212ENST00000556054 CDK5RAP2Q96SN8 1893 aa14.37□□□□□ -0.11
APEX1-212ENST00000556054 ZNF541Q9H0D2 1346 aa14.37□□□□□ -0.11
APEX1-212ENST00000556054 ECM29Q5VYK3 1845 aa14.36□□□□□ -0.11
APEX1-212ENST00000556054 APOBEC3HQ6NTF7 200 aaKnown RBP14.36□□□□□ -0.11
APEX1-212ENST00000556054 DPY19L2Q6NUT2 758 aa14.36□□□□□ -0.11
APEX1-212ENST00000556054 LCORLQ8N3X6 602 aa14.36□□□□□ -0.11
APEX1-212ENST00000556054 IL17RAQ96F46 866 aa14.36□□□□□ -0.11
APEX1-212ENST00000556054 ZBED3Q96IU2 234 aaPredicted RBP14.36□□□□□ -0.11
APEX1-212ENST00000556054 CRNKL1Q9BZJ0 848 aaKnown RBP14.36□□□□□ -0.11
APEX1-212ENST00000556054 ATP8A2Q9NTI2 1148 aa14.36□□□□□ -0.11
APEX1-212ENST00000556054 CTNNA3Q9UI47 895 aa14.36□□□□□ -0.11
APEX1-212ENST00000556054 U3KPZ7 1027 aaPredicted RBP14.36□□□□□ -0.11
APEX1-212ENST00000556054 F8W031 263 aaPredicted RBP14.35□□□□□ -0.11
APEX1-212ENST00000556054 BTDP43251 543 aa14.35□□□□□ -0.11
APEX1-212ENST00000556054 RBM25P49756 843 aaKnown RBP14.35□□□□□ -0.11
APEX1-212ENST00000556054 GMPSP49915 693 aaPredicted RBP14.35□□□□□ -0.11
APEX1-212ENST00000556054 RHBDL3P58872 404 aa14.35□□□□□ -0.11
APEX1-212ENST00000556054 CCDC129Q6ZRS4 1044 aa14.35□□□□□ -0.11
APEX1-212ENST00000556054 MIGA1Q8NAN2 632 aa14.35□□□□□ -0.11
APEX1-212ENST00000556054 IL27Q8NEV9 243 aa14.35□□□□□ -0.11
APEX1-212ENST00000556054 KCNB2Q92953 911 aa14.35□□□□□ -0.11
APEX1-212ENST00000556054 L3MBTL3Q96JM7 780 aaPredicted RBP14.35□□□□□ -0.11
APEX1-212ENST00000556054 NACAP1Q9BZK3 213 aa14.35□□□□□ -0.11
APEX1-212ENST00000556054 ARMT1Q9H993 441 aa14.35□□□□□ -0.11
APEX1-212ENST00000556054 AATFQ9NY61 560 aaKnown RBP eCLIP14.35□□□□□ -0.11
APEX1-212ENST00000556054 ZBTB12Q9Y330 459 aaPredicted RBP14.35□□□□□ -0.11
APEX1-212ENST00000556054 GSG1L2A8MUP6 293 aa14.34□□□□□ -0.11
APEX1-212ENST00000556054 FOXP2O15409 715 aa14.34□□□□□ -0.11
APEX1-212ENST00000556054 SCNN1DP51172 638 aa14.34□□□□□ -0.11
APEX1-212ENST00000556054 DYNLL1P63167 89 aaKnown RBP14.34□□□□□ -0.11
APEX1-212ENST00000556054 PTH1RQ03431 593 aa14.34□□□□□ -0.11
APEX1-212ENST00000556054 NECTIN1Q15223 517 aa14.34□□□□□ -0.11
APEX1-212ENST00000556054 DLGAP5Q15398 846 aa14.34□□□□□ -0.11
APEX1-212ENST00000556054 CFAP100Q494V2 611 aa14.34□□□□□ -0.11
APEX1-212ENST00000556054 FKBP1CQ5VVH2 108 aa14.34□□□□□ -0.11
APEX1-212ENST00000556054 GPRC5DQ9NZD1 345 aa14.34□□□□□ -0.11
APEX1-212ENST00000556054 MKRN1Q9UHC7 482 aaKnown RBP14.34□□□□□ -0.11
APEX1-212ENST00000556054 CNOT7Q9UIV1 285 aaKnown RBP14.34□□□□□ -0.11
APEX1-212ENST00000556054 TAOK2Q9UL54 1235 aa14.34□□□□□ -0.11
APEX1-212ENST00000556054 SLC4A4Q9Y6R1 1079 aa14.34□□□□□ -0.11
APEX1-212ENST00000556054 GLTPD2A6NH11 291 aa14.33□□□□□ -0.12
APEX1-212ENST00000556054 SPDYE2BA6NHP3 402 aa14.33□□□□□ -0.12
APEX1-212ENST00000556054 H7C1D1 291 aa14.33□□□□□ -0.12
APEX1-212ENST00000556054 SPDYE6P0CI01 402 aa14.33□□□□□ -0.12
APEX1-212ENST00000556054 MCCP23508 829 aa14.33□□□□□ -0.12
APEX1-212ENST00000556054 HSPA4P34932 840 aa14.33□□□□□ -0.12
APEX1-212ENST00000556054 ANAPC15P60006 121 aa14.33□□□□□ -0.12
APEX1-212ENST00000556054 TSGA10IPQ3SY00 556 aa14.33□□□□□ -0.12
APEX1-212ENST00000556054 VPS53Q5VIR6 699 aa14.33□□□□□ -0.12
APEX1-212ENST00000556054 IFNL3Q8IZI9 196 aa14.33□□□□□ -0.12
APEX1-212ENST00000556054 TBC1D32Q96NH3 1257 aa14.33□□□□□ -0.12
APEX1-212ENST00000556054 IDI2Q9BXS1 227 aa14.33□□□□□ -0.12
APEX1-212ENST00000556054 C22orf23Q9BZE7 217 aa14.33□□□□□ -0.12
APEX1-212ENST00000556054 MYOZ2Q9NPC6 264 aa14.33□□□□□ -0.12
APEX1-212ENST00000556054 GJA3Q9Y6H8 435 aa14.33□□□□□ -0.12
APEX1-212ENST00000556054 SCN4AP35499 1836 aa14.33□□□□□ -0.12
APEX1-212ENST00000556054 ADAMTSL1Q8N6G6 1762 aa14.32□□□□□ -0.12
APEX1-212ENST00000556054 LAMA4Q16363 1823 aa14.32□□□□□ -0.12
APEX1-212ENST00000556054 FGAP02671 866 aa14.32□□□□□ -0.12
APEX1-212ENST00000556054 SBK1Q52WX2 424 aa14.32□□□□□ -0.12
APEX1-212ENST00000556054 RNF20Q5VTR2 975 aa14.32□□□□□ -0.12
APEX1-212ENST00000556054 CDC42EP5Q6NZY7 148 aa14.32□□□□□ -0.12
APEX1-212ENST00000556054 TEX11Q8IYF3 940 aa14.32□□□□□ -0.12
APEX1-212ENST00000556054 SH3RF3Q8TEJ3 882 aaPredicted RBP14.32□□□□□ -0.12
APEX1-212ENST00000556054 DDRGK1Q96HY6 314 aa14.32□□□□□ -0.12
APEX1-212ENST00000556054 USP40Q9NVE5 1235 aa14.32□□□□□ -0.12
APEX1-212ENST00000556054 RBM8AQ9Y5S9 174 aaKnown RBP14.32□□□□□ -0.12
APEX1-212ENST00000556054 NT5C2P49902 561 aa14.31□□□□□ -0.12
APEX1-212ENST00000556054 RBM5P52756 815 aaKnown RBP eCLIP14.31□□□□□ -0.124e-13■■■□□ 17.9
APEX1-212ENST00000556054 MICALL2Q8IY33 904 aa14.31□□□□□ -0.12
APEX1-212ENST00000556054 PRMT6Q96LA8 375 aaPredicted RBP14.31□□□□□ -0.12
APEX1-212ENST00000556054 DCP1AQ9NPI6 582 aaPredicted RBP14.31□□□□□ -0.12
APEX1-212ENST00000556054 MYH1P12882 1939 aa14.31□□□□□ -0.12
APEX1-212ENST00000556054 BAZ2AQ9UIF9 1905 aaKnown RBP14.31□□□□□ -0.12
APEX1-212ENST00000556054 COL2A1P02458 1487 aaPredicted RBP14.31□□□□□ -0.12
APEX1-212ENST00000556054 WDR90Q96KV7 1748 aa14.3□□□□□ -0.12
APEX1-212ENST00000556054 NAV1Q8NEY1 1877 aa14.3□□□□□ -0.12
APEX1-212ENST00000556054 WNT10BO00744 389 aa14.3□□□□□ -0.12
APEX1-212ENST00000556054 PRKAB2O43741 272 aa14.3□□□□□ -0.12
APEX1-212ENST00000556054 MYO1BO43795 1136 aa14.3□□□□□ -0.12
APEX1-212ENST00000556054 ENTPD3O75355 529 aa14.3□□□□□ -0.12
APEX1-212ENST00000556054 WDHD1O75717 1129 aaPredicted RBP14.3□□□□□ -0.12
APEX1-212ENST00000556054 DDNO94850 711 aaPredicted RBP14.3□□□□□ -0.12
APEX1-212ENST00000556054 APPP05067 770 aa14.3□□□□□ -0.12
APEX1-212ENST00000556054 LMOD1P29536 600 aaPredicted RBP14.3□□□□□ -0.12
APEX1-212ENST00000556054 SPDYE2Q495Y8 402 aa14.3□□□□□ -0.12
APEX1-212ENST00000556054 NAPBQ9H115 298 aa14.3□□□□□ -0.12
APEX1-212ENST00000556054 EPB41L4AQ9HCS5 686 aaPredicted RBP14.3□□□□□ -0.12
APEX1-212ENST00000556054 ARPP21Q9UBL0 812 aaPredicted RBP14.3□□□□□ -0.12
APEX1-212ENST00000556054 ANAPC4Q9UJX5 808 aa14.3□□□□□ -0.12
APEX1-212ENST00000556054 DDX60LQ5H9U9 1706 aaKnown RBP14.29□□□□□ -0.12
APEX1-212ENST00000556054 PCP11498 1178 aaKnown RBP14.29□□□□□ -0.12
APEX1-212ENST00000556054 ZKSCAN1P17029 563 aaPredicted RBP14.29□□□□□ -0.12
APEX1-212ENST00000556054 USP5P45974 858 aa14.29□□□□□ -0.12
APEX1-212ENST00000556054 KRT32Q14532 448 aa14.29□□□□□ -0.12
APEX1-212ENST00000556054 IMMTQ16891 758 aaKnown RBP14.29□□□□□ -0.12
APEX1-212ENST00000556054 CREB3L3Q68CJ9 461 aa14.29□□□□□ -0.12
APEX1-212ENST00000556054 FAM83AQ86UY5 434 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms