RNA–Protein interactions for RNA: ENST00000555907.5

RAD51B-222, Transcript of RAD51 paralog B, human

TSL 5

Gene RAD51B, Length 615 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAD51B-222	ENST00000555907	HOXD11	P31277	338 aa	Predicted RBP	13.72	□□□□□ -0.21
RAD51B-222	ENST00000555907	ZNF280A	P59817	542 aa	Predicted RBP	13.72	□□□□□ -0.21
RAD51B-222	ENST00000555907	TTF1	Q15361	905 aa	Predicted RBP	13.72	□□□□□ -0.21
RAD51B-222	ENST00000555907	ANGEL2	Q5VTE6	544 aa	Known RBP	13.72	□□□□□ -0.21
RAD51B-222	ENST00000555907	PRPF38B	Q5VTL8	546 aa	Known RBP	13.72	□□□□□ -0.21
RAD51B-222	ENST00000555907	RASAL3	Q86YV0	1011 aa		13.72	□□□□□ -0.21
RAD51B-222	ENST00000555907	SPATA5	Q8NB90	893 aa		13.72	□□□□□ -0.21
RAD51B-222	ENST00000555907	GML	Q99445	158 aa		13.72	□□□□□ -0.21
RAD51B-222	ENST00000555907	RNF216	Q9NWF9	866 aa	Predicted RBP	13.72	□□□□□ -0.21
RAD51B-222	ENST00000555907	HPS5	Q9UPZ3	1129 aa		13.72	□□□□□ -0.21
RAD51B-222	ENST00000555907	FAM205A	Q6ZU69	1335 aa		13.71	□□□□□ -0.21
RAD51B-222	ENST00000555907	RASGRF1	Q13972	1273 aa		13.71	□□□□□ -0.21
RAD51B-222	ENST00000555907	SCARF1	Q14162	830 aa		13.71	□□□□□ -0.21
RAD51B-222	ENST00000555907	DACT2	Q5SW24	774 aa		13.71	□□□□□ -0.21
RAD51B-222	ENST00000555907	PRAMEF18	Q5VWM3	479 aa		13.71	□□□□□ -0.21
RAD51B-222	ENST00000555907	MXD3	Q9BW11	206 aa		13.71	□□□□□ -0.21
RAD51B-222	ENST00000555907	PAG1	Q9NWQ8	432 aa		13.71	□□□□□ -0.21
RAD51B-222	ENST00000555907	SALL1	Q9NSC2	1324 aa		13.7	□□□□□ -0.22
RAD51B-222	ENST00000555907	CYP2E1	P05181	493 aa	Predicted RBP	13.7	□□□□□ -0.22
RAD51B-222	ENST00000555907	ZAP70	P43403	619 aa		13.7	□□□□□ -0.22
RAD51B-222	ENST00000555907	TTLL12	Q14166	644 aa	Predicted RBP	13.7	□□□□□ -0.22
RAD51B-222	ENST00000555907	STRIP1	Q5VSL9	837 aa		13.7	□□□□□ -0.22
RAD51B-222	ENST00000555907	TTLL5	Q6EMB2	1281 aa		13.7	□□□□□ -0.22
RAD51B-222	ENST00000555907	TMED8	Q6PL24	325 aa	Predicted RBP	13.7	□□□□□ -0.22
RAD51B-222	ENST00000555907	KBTBD3	Q8NAB2	608 aa		13.7	□□□□□ -0.22
RAD51B-222	ENST00000555907	MYOZ2	Q9NPC6	264 aa		13.7	□□□□□ -0.22
RAD51B-222	ENST00000555907	TRIM6-TRIM34	B2RNG4	842 aa		13.69	□□□□□ -0.22
RAD51B-222	ENST00000555907	UBE2Q2L	H0YL09	131 aa		13.69	□□□□□ -0.22
RAD51B-222	ENST00000555907	NPM3	O75607	178 aa	Known RBP	13.69	□□□□□ -0.22
RAD51B-222	ENST00000555907	WDR66	Q8TBY9	1149 aa		13.69	□□□□□ -0.22
RAD51B-222	ENST00000555907	RFX7	Q2KHR2	1363 aa		13.69	□□□□□ -0.22
RAD51B-222	ENST00000555907	MYO3B	Q8WXR4	1341 aa		13.68	□□□□□ -0.22
RAD51B-222	ENST00000555907	HIP1	O00291	1037 aa		13.68	□□□□□ -0.22
RAD51B-222	ENST00000555907	GOLIM4	O00461	696 aa		13.68	□□□□□ -0.22
RAD51B-222	ENST00000555907	FRAT2	O75474	233 aa	Predicted RBP	13.68	□□□□□ -0.22
RAD51B-222	ENST00000555907	FKBP1A	P62942	108 aa	Known RBP	13.68	□□□□□ -0.22
RAD51B-222	ENST00000555907	GTF2I	P78347	998 aa		13.68	□□□□□ -0.22
RAD51B-222	ENST00000555907	LRRFIP1	Q32MZ4	808 aa	Known RBP	13.68	□□□□□ -0.22
RAD51B-222	ENST00000555907	OGFOD1	Q8N543	542 aa		13.68	□□□□□ -0.22
RAD51B-222	ENST00000555907	ZGPAT	Q8N5A5	531 aa	Known RBP	13.68	□□□□□ -0.22
RAD51B-222	ENST00000555907	TBC1D22A	Q8WUA7	517 aa		13.68	□□□□□ -0.22
RAD51B-222	ENST00000555907	ZNF296	Q8WUU4	475 aa	Predicted RBP	13.68	□□□□□ -0.22
RAD51B-222	ENST00000555907	RILPL2	Q969X0	211 aa		13.68	□□□□□ -0.22
RAD51B-222	ENST00000555907	DNAJC2	Q99543	621 aa	Known RBP	13.68	□□□□□ -0.22
RAD51B-222	ENST00000555907	SNRK	Q9NRH2	765 aa		13.68	□□□□□ -0.22
RAD51B-222	ENST00000555907	MAP4K4	O95819	1239 aa	Predicted RBP	13.67	□□□□□ -0.22
RAD51B-222	ENST00000555907	PRKG1	Q13976	671 aa		13.67	□□□□□ -0.22
RAD51B-222	ENST00000555907	PI16	Q6UXB8	463 aa		13.67	□□□□□ -0.22
RAD51B-222	ENST00000555907	ANTXR1	Q9H6X2	564 aa		13.67	□□□□□ -0.22
RAD51B-222	ENST00000555907	SUGT1	Q9Y2Z0	365 aa		13.67	□□□□□ -0.22
RAD51B-222	ENST00000555907	PAPPA2	Q9BXP8	1791 aa		13.67	□□□□□ -0.22
RAD51B-222	ENST00000555907	EIF5B	O60841	1220 aa	Known RBP	13.66	□□□□□ -0.22
RAD51B-222	ENST00000555907	CDC45	O75419	566 aa		13.66	□□□□□ -0.22
RAD51B-222	ENST00000555907	ZFY	P08048	801 aa	Predicted RBP	13.66	□□□□□ -0.22
RAD51B-222	ENST00000555907	CHML	P26374	656 aa		13.66	□□□□□ -0.22
RAD51B-222	ENST00000555907	NBPF9	Q3BBW0	867 aa		13.66	□□□□□ -0.22
RAD51B-222	ENST00000555907	SPTY2D1	Q68D10	685 aa	Predicted RBP	13.66	□□□□□ -0.22
RAD51B-222	ENST00000555907	ZSCAN25	Q6NSZ9	544 aa		13.66	□□□□□ -0.22
RAD51B-222	ENST00000555907	KIAA0825	Q8IV33	1275 aa		13.66	□□□□□ -0.22
RAD51B-222	ENST00000555907	EDC3	Q96F86	508 aa	Known RBP	13.66	□□□□□ -0.22
RAD51B-222	ENST00000555907	PIH1D3	Q9NQM4	214 aa	Known RBP	13.66	□□□□□ -0.22
RAD51B-222	ENST00000555907	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	13.66	□□□□□ -0.22
RAD51B-222	ENST00000555907	NDUFB9	Q9Y6M9	179 aa		13.66	□□□□□ -0.22
RAD51B-222	ENST00000555907	RNF113A	O15541	343 aa	Known RBP	13.65	□□□□□ -0.22
RAD51B-222	ENST00000555907	MMP14	P50281	582 aa		13.65	□□□□□ -0.22
RAD51B-222	ENST00000555907	MAP3K12	Q12852	859 aa		13.65	□□□□□ -0.22
RAD51B-222	ENST00000555907	C8orf34	Q49A92	452 aa		13.65	□□□□□ -0.22
RAD51B-222	ENST00000555907	FSD1	Q9BTV5	496 aa		13.65	□□□□□ -0.22
RAD51B-222	ENST00000555907	MRI	Q9BWK5	157 aa		13.65	□□□□□ -0.22
RAD51B-222	ENST00000555907	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	13.65	□□□□□ -0.22
RAD51B-222	ENST00000555907	COL1A1	P02452	1464 aa	Predicted RBP	13.65	□□□□□ -0.22
RAD51B-222	ENST00000555907	PITPNM2	Q9BZ72	1349 aa		13.64	□□□□□ -0.23
RAD51B-222	ENST00000555907	WNT10B	O00744	389 aa		13.64	□□□□□ -0.23
RAD51B-222	ENST00000555907	UBE3C	Q15386	1083 aa		13.64	□□□□□ -0.23
RAD51B-222	ENST00000555907	CASC1	Q6TDU7	716 aa		13.64	□□□□□ -0.23
RAD51B-222	ENST00000555907	TBC1D9	Q6ZT07	1266 aa		13.64	□□□□□ -0.23
RAD51B-222	ENST00000555907	BACH2	Q9BYV9	841 aa		13.64	□□□□□ -0.23
RAD51B-222	ENST00000555907	ECM29	Q5VYK3	1845 aa		13.64	□□□□□ -0.23
RAD51B-222	ENST00000555907	ADD2	P35612	726 aa		13.63	□□□□□ -0.23
RAD51B-222	ENST00000555907	CHAF1A	Q13111	956 aa	Predicted RBP	13.63	□□□□□ -0.23
RAD51B-222	ENST00000555907	ZMYM1	Q5SVZ6	1142 aa		13.63	□□□□□ -0.23
RAD51B-222	ENST00000555907	ERICH6	Q7L0X2	663 aa		13.63	□□□□□ -0.23
RAD51B-222	ENST00000555907	CERS5	Q8N5B7	392 aa		13.63	□□□□□ -0.23
RAD51B-222	ENST00000555907	RUFY2	Q8WXA3	655 aa		13.63	□□□□□ -0.23
RAD51B-222	ENST00000555907	HELLS	Q9NRZ9	838 aa		13.63	□□□□□ -0.23
RAD51B-222	ENST00000555907	LRP2BP	Q9P2M1	347 aa		13.63	□□□□□ -0.23
RAD51B-222	ENST00000555907	JAG2	Q9Y219	1238 aa		13.63	□□□□□ -0.23
RAD51B-222	ENST00000555907	TCRBV5S4A2T	A0A5A2	114 aa		13.62	□□□□□ -0.23
RAD51B-222	ENST00000555907		F8W031	263 aa	Predicted RBP	13.62	□□□□□ -0.23
RAD51B-222	ENST00000555907	GPR25	O00155	361 aa		13.62	□□□□□ -0.23
RAD51B-222	ENST00000555907	LDHB	P07195	334 aa	Known RBP	13.62	□□□□□ -0.23
RAD51B-222	ENST00000555907	PKN2	Q16513	984 aa	Known RBP	13.62	□□□□□ -0.23
RAD51B-222	ENST00000555907	SLC9C2	Q5TAH2	1124 aa		13.62	□□□□□ -0.23
RAD51B-222	ENST00000555907	REM2	Q8IYK8	340 aa	Predicted RBP	13.62	□□□□□ -0.23
RAD51B-222	ENST00000555907	NSUN4	Q96CB9	384 aa	Known RBP	13.62	□□□□□ -0.23
RAD51B-222	ENST00000555907	FAM163A	Q96GL9	167 aa	Predicted RBP	13.62	□□□□□ -0.23
RAD51B-222	ENST00000555907	R3HDML	Q9H3Y0	253 aa		13.62	□□□□□ -0.23
RAD51B-222	ENST00000555907	DIAPH3	Q9NSV4	1193 aa		13.62	□□□□□ -0.23
RAD51B-222	ENST00000555907	ABCF2	Q9UG63	623 aa		13.62	□□□□□ -0.23
RAD51B-222	ENST00000555907	FZD1	Q9UP38	647 aa		13.62	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms