RNA–Protein interactions for RNA: ENST00000555906.5

PRKCH-219, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 459 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-219ENST00000555906 TRIM17Q9Y577 477 aa24.53■■□□□ 1.52
PRKCH-219ENST00000555906 SNCAIPQ9Y6H5 919 aa24.53■■□□□ 1.52
PRKCH-219ENST00000555906 CENPFP49454 3210 aa24.53■■□□□ 1.52
PRKCH-219ENST00000555906 CCL15-CCL14A0A0B4J2E2 113 aa24.52■■□□□ 1.52
PRKCH-219ENST00000555906 GNAI3P08754 354 aa24.52■■□□□ 1.52
PRKCH-219ENST00000555906 PHKA1P46020 1223 aa24.52■■□□□ 1.52
PRKCH-219ENST00000555906 MTX1Q13505 466 aa24.52■■□□□ 1.52
PRKCH-219ENST00000555906 CCL15Q16663 113 aa24.52■■□□□ 1.52
PRKCH-219ENST00000555906 LDHBP07195 334 aaKnown RBP24.51■■□□□ 1.51
PRKCH-219ENST00000555906 DIXDC1Q155Q3 683 aa24.51■■□□□ 1.51
PRKCH-219ENST00000555906 FAM151AQ8WW52 585 aa24.51■■□□□ 1.51
PRKCH-219ENST00000555906 PDS5AQ29RF7 1337 aaKnown RBP24.51■■□□□ 1.51
PRKCH-219ENST00000555906 ERO1BQ86YB8 467 aa24.5■■□□□ 1.51
PRKCH-219ENST00000555906 ZNF341Q9BYN7 854 aa24.5■■□□□ 1.51
PRKCH-219ENST00000555906 CCDC102BQ68D86 513 aa24.49■■□□□ 1.51
PRKCH-219ENST00000555906 CDC42EP5Q6NZY7 148 aa24.49■■□□□ 1.51
PRKCH-219ENST00000555906 ZGPATQ8N5A5 531 aaKnown RBP24.49■■□□□ 1.51
PRKCH-219ENST00000555906 CD99L2Q8TCZ2 262 aa24.49■■□□□ 1.51
PRKCH-219ENST00000555906 IPO8O15397 1037 aaKnown RBP24.48■■□□□ 1.51
PRKCH-219ENST00000555906 SRGAP3O43295 1099 aa24.48■■□□□ 1.51
PRKCH-219ENST00000555906 ADORA1P30542 326 aa24.48■■□□□ 1.51
PRKCH-219ENST00000555906 SP3Q02447 781 aa24.48■■□□□ 1.51
PRKCH-219ENST00000555906 PPIL2Q13356 520 aa24.48■■□□□ 1.51
PRKCH-219ENST00000555906 TAF1CQ15572 869 aaPredicted RBP24.48■■□□□ 1.51
PRKCH-219ENST00000555906 RFX7Q2KHR2 1363 aa24.48■■□□□ 1.51
PRKCH-219ENST00000555906 ZKSCAN4Q969J2 545 aaPredicted RBP24.48■■□□□ 1.51
PRKCH-219ENST00000555906 ZCCHC17Q9NP64 241 aaKnown RBP24.48■■□□□ 1.51
PRKCH-219ENST00000555906 CETPP11597 493 aa24.47■■□□□ 1.51
PRKCH-219ENST00000555906 TRIM27P14373 513 aa24.47■■□□□ 1.51
PRKCH-219ENST00000555906 NFIAQ12857 509 aa24.47■■□□□ 1.51
PRKCH-219ENST00000555906 ZFYVE28Q9HCC9 887 aa24.47■■□□□ 1.51
PRKCH-219ENST00000555906 GAKO14976 1311 aa24.46■■□□□ 1.51
PRKCH-219ENST00000555906 SNAPC2Q13487 334 aa24.46■■□□□ 1.51
PRKCH-219ENST00000555906 RASGRF1Q13972 1273 aa24.46■■□□□ 1.51
PRKCH-219ENST00000555906 ATF7IPQ6VMQ6 1270 aa24.46■■□□□ 1.51
PRKCH-219ENST00000555906 FAM43AQ8N2R8 423 aa24.46■■□□□ 1.51
PRKCH-219ENST00000555906 AKAP2Q9Y2D5 859 aa24.46■■□□□ 1.51
PRKCH-219ENST00000555906 PTPN22Q9Y2R2 807 aa24.46■■□□□ 1.51
PRKCH-219ENST00000555906 A0A1B0GUL7 405 aa24.45■■□□□ 1.5
PRKCH-219ENST00000555906 IRF6O14896 467 aa24.45■■□□□ 1.5
PRKCH-219ENST00000555906 TCP10Q12799 353 aa24.45■■□□□ 1.5
PRKCH-219ENST00000555906 EFCC1Q9HA90 598 aa24.45■■□□□ 1.5
PRKCH-219ENST00000555906 FAM198AQ9UFP1 575 aa24.45■■□□□ 1.5
PRKCH-219ENST00000555906 BRCA2P51587 3418 aa24.45■■□□□ 1.5
PRKCH-219ENST00000555906 ZSWIM8A7E2V4 1837 aa24.45■■□□□ 1.5
PRKCH-219ENST00000555906 PPATQ06203 517 aa24.44■■□□□ 1.5
PRKCH-219ENST00000555906 MIGA2Q7L4E1 593 aa24.44■■□□□ 1.5
PRKCH-219ENST00000555906 ZNF112Q9UJU3 913 aa24.44■■□□□ 1.5
PRKCH-219ENST00000555906 ATRNL1Q5VV63 1379 aa24.43■■□□□ 1.5
PRKCH-219ENST00000555906 DOCK1Q14185 1865 aa24.43■■□□□ 1.5
PRKCH-219ENST00000555906 WDHD1O75717 1129 aaPredicted RBP24.43■■□□□ 1.5
PRKCH-219ENST00000555906 INPP5BP32019 993 aa24.43■■□□□ 1.5
PRKCH-219ENST00000555906 TFCP2Q12800 502 aa24.43■■□□□ 1.5
PRKCH-219ENST00000555906 MVPQ14764 893 aaKnown RBP24.43■■□□□ 1.5
PRKCH-219ENST00000555906 DZIP1Q86YF9 867 aaKnown RBP24.43■■□□□ 1.5
PRKCH-219ENST00000555906 XAGE2Q96GT9 111 aa24.43■■□□□ 1.5
PRKCH-219ENST00000555906 USP40Q9NVE5 1235 aa24.43■■□□□ 1.5
PRKCH-219ENST00000555906 MAST2Q6P0Q8 1798 aa24.43■■□□□ 1.5
PRKCH-219ENST00000555906 GNAI2P04899 355 aa24.42■■□□□ 1.5
PRKCH-219ENST00000555906 TIMM10P62072 90 aa24.42■■□□□ 1.5
PRKCH-219ENST00000555906 CAP1Q01518 475 aa24.42■■□□□ 1.5
PRKCH-219ENST00000555906 NOL9Q5SY16 702 aaKnown RBP24.42■■□□□ 1.5
PRKCH-219ENST00000555906 FRAT1Q92837 279 aaPredicted RBP24.42■■□□□ 1.5
PRKCH-219ENST00000555906 IDI2Q9BXS1 227 aa24.42■■□□□ 1.5
PRKCH-219ENST00000555906 KIAA0100Q14667 2235 aaKnown RBP24.42■■□□□ 1.5
PRKCH-219ENST00000555906 PTPRFP10586 1907 aa24.41■■□□□ 1.5
PRKCH-219ENST00000555906 BTBD19C9JJ37 291 aa24.41■■□□□ 1.5
PRKCH-219ENST00000555906 BCAR3O75815 825 aa24.41■■□□□ 1.5
PRKCH-219ENST00000555906 ARHGEF6Q15052 776 aa24.41■■□□□ 1.5
PRKCH-219ENST00000555906 SLF2Q8IX21 1173 aa24.41■■□□□ 1.5
PRKCH-219ENST00000555906 ARMC5Q96C12 935 aa24.41■■□□□ 1.5
PRKCH-219ENST00000555906 TNNQ9UQP3 1299 aa24.41■■□□□ 1.5
PRKCH-219ENST00000555906 MKI67P46013 3256 aaKnown RBP24.4■■□□□ 1.5
PRKCH-219ENST00000555906 TLR2O60603 784 aa24.4■■□□□ 1.5
PRKCH-219ENST00000555906 ENTPD3O75355 529 aa24.4■■□□□ 1.5
PRKCH-219ENST00000555906 SPTY2D1Q68D10 685 aaPredicted RBP24.4■■□□□ 1.5
PRKCH-219ENST00000555906 FAM163AQ96GL9 167 aaPredicted RBP24.4■■□□□ 1.5
PRKCH-219ENST00000555906 ABCF2Q9UG63 623 aa24.4■■□□□ 1.5
PRKCH-219ENST00000555906 KCNH4Q9UQ05 1017 aa24.4■■□□□ 1.5
PRKCH-219ENST00000555906 MROH7-TTC4A0A0A0MT08 1334 aa24.39■■□□□ 1.5
PRKCH-219ENST00000555906 SLC34A2O95436 690 aa24.39■■□□□ 1.49
PRKCH-219ENST00000555906 RGS3P49796 1198 aa24.39■■□□□ 1.49
PRKCH-219ENST00000555906 PHIPQ8WWQ0 1821 aa24.38■■□□□ 1.49
PRKCH-219ENST00000555906 PRPF38BQ5VTL8 546 aaKnown RBP24.38■■□□□ 1.49
PRKCH-219ENST00000555906 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.38■■□□□ 1.49
PRKCH-219ENST00000555906 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.38■■□□□ 1.49
PRKCH-219ENST00000555906 PNMA6EA0A0J9YXQ4 647 aa24.37■■□□□ 1.49
PRKCH-219ENST00000555906 ZKSCAN2Q63HK3 967 aa24.37■■□□□ 1.49
PRKCH-219ENST00000555906 ANKRD23Q86SG2 305 aa24.37■■□□□ 1.49
PRKCH-219ENST00000555906 ZFPM1Q8IX07 1006 aa24.37■■□□□ 1.49
PRKCH-219ENST00000555906 CLUAP1Q96AJ1 413 aa24.37■■□□□ 1.49
PRKCH-219ENST00000555906 ARID4AP29374 1257 aaPredicted RBP24.36■■□□□ 1.49
PRKCH-219ENST00000555906 BTDP43251 543 aa24.36■■□□□ 1.49
PRKCH-219ENST00000555906 COL2A1P02458 1487 aaPredicted RBP24.35■■□□□ 1.49
PRKCH-219ENST00000555906 LACTBP83111 547 aaPredicted RBP24.35■■□□□ 1.49
PRKCH-219ENST00000555906 ERICH6Q7L0X2 663 aa24.35■■□□□ 1.49
PRKCH-219ENST00000555906 TMEM57Q8N5G2 664 aa24.35■■□□□ 1.49
PRKCH-219ENST00000555906 NEUROD6Q96NK8 337 aa24.35■■□□□ 1.49
PRKCH-219ENST00000555906 HMG20BQ9P0W2 317 aa24.35■■□□□ 1.49
PRKCH-219ENST00000555906 ATAD5Q96QE3 1844 aa24.35■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms