RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 HDLBPQ00341 1268 aaKnown RBP13.22□□□□□ -0.29
TMEM260-208ENST00000555905 DIXDC1Q155Q3 683 aa13.22□□□□□ -0.29
TMEM260-208ENST00000555905 HHIPL2Q6UWX4 724 aa13.22□□□□□ -0.29
TMEM260-208ENST00000555905 ADGRA1Q86SQ6 560 aa13.22□□□□□ -0.29
TMEM260-208ENST00000555905 TEKT1Q969V4 418 aa13.22□□□□□ -0.29
TMEM260-208ENST00000555905 FAM163AQ96GL9 167 aaPredicted RBP13.22□□□□□ -0.29
TMEM260-208ENST00000555905 MRIQ9BWK5 157 aa13.22□□□□□ -0.29
TMEM260-208ENST00000555905 HDAC9Q9UKV0 1011 aa13.22□□□□□ -0.29
TMEM260-208ENST00000555905 PLCG2P16885 1265 aa13.21□□□□□ -0.29
TMEM260-208ENST00000555905 MCCP23508 829 aa13.21□□□□□ -0.29
TMEM260-208ENST00000555905 MMP14P50281 582 aa13.21□□□□□ -0.29
TMEM260-208ENST00000555905 SCNN1DP51172 638 aa13.21□□□□□ -0.29
TMEM260-208ENST00000555905 C9orf131Q5VYM1 1079 aa13.21□□□□□ -0.29
TMEM260-208ENST00000555905 OGFOD1Q8N543 542 aa13.21□□□□□ -0.29
TMEM260-208ENST00000555905 STRBPQ96SI9 672 aaKnown RBP13.21□□□□□ -0.29
TMEM260-208ENST00000555905 USP26Q9BXU7 913 aa13.21□□□□□ -0.29
TMEM260-208ENST00000555905 LSG1Q9H089 658 aaKnown RBP13.21□□□□□ -0.29
TMEM260-208ENST00000555905 ARMT1Q9H993 441 aa13.21□□□□□ -0.29
TMEM260-208ENST00000555905 AATFQ9NY61 560 aaKnown RBP eCLIP13.21□□□□□ -0.29
TMEM260-208ENST00000555905 SERPINA10Q9UK55 444 aa13.21□□□□□ -0.29
TMEM260-208ENST00000555905 GAKO14976 1311 aa13.2□□□□□ -0.3
TMEM260-208ENST00000555905 GPR75-ASB3A0A0A6YYF3 556 aa13.2□□□□□ -0.3
TMEM260-208ENST00000555905 APPP05067 770 aa13.2□□□□□ -0.3
TMEM260-208ENST00000555905 USP17L8P0C7I0 530 aa13.2□□□□□ -0.3
TMEM260-208ENST00000555905 CRKP46108 304 aa13.2□□□□□ -0.3
TMEM260-208ENST00000555905 RBM5P52756 815 aaKnown RBP eCLIP13.2□□□□□ -0.3
TMEM260-208ENST00000555905 LCORLQ8N3X6 602 aa13.2□□□□□ -0.3
TMEM260-208ENST00000555905 GMLQ99445 158 aa13.2□□□□□ -0.3
TMEM260-208ENST00000555905 RIOK1Q9BRS2 568 aaKnown RBP13.2□□□□□ -0.3
TMEM260-208ENST00000555905 DSCC1Q9BVC3 393 aa13.2□□□□□ -0.3
TMEM260-208ENST00000555905 CRNKL1Q9BZJ0 848 aaKnown RBP13.2□□□□□ -0.3
TMEM260-208ENST00000555905 DAGLAQ9Y4D2 1042 aa13.2□□□□□ -0.3
TMEM260-208ENST00000555905 GJA3Q9Y6H8 435 aa13.2□□□□□ -0.3
TMEM260-208ENST00000555905 ZNF541Q9H0D2 1346 aa13.19□□□□□ -0.3
TMEM260-208ENST00000555905 PRR29P0C7W0 189 aa13.19□□□□□ -0.3
TMEM260-208ENST00000555905 HSPD1P10809 573 aaKnown RBP13.19□□□□□ -0.3
TMEM260-208ENST00000555905 BTDP43251 543 aa13.19□□□□□ -0.3
TMEM260-208ENST00000555905 PPP4CP60510 307 aa13.19□□□□□ -0.3
TMEM260-208ENST00000555905 DYNLL1P63167 89 aaKnown RBP13.19□□□□□ -0.3
TMEM260-208ENST00000555905 PTH1RQ03431 593 aa13.19□□□□□ -0.3
TMEM260-208ENST00000555905 GPC2Q8N158 579 aa13.19□□□□□ -0.3
TMEM260-208ENST00000555905 MAP4K1Q92918 833 aa13.19□□□□□ -0.3
TMEM260-208ENST00000555905 DDRGK1Q96HY6 314 aa13.19□□□□□ -0.3
TMEM260-208ENST00000555905 ZDHHC15Q96MV8 337 aa13.19□□□□□ -0.3
TMEM260-208ENST00000555905 C22orf23Q9BZE7 217 aa13.19□□□□□ -0.3
TMEM260-208ENST00000555905 NACAP1Q9BZK3 213 aa13.19□□□□□ -0.3
TMEM260-208ENST00000555905 SLC4A4Q9Y6R1 1079 aa13.19□□□□□ -0.3
TMEM260-208ENST00000555905 RPAP1Q9BWH6 1393 aaPredicted RBP13.19□□□□□ -0.3
TMEM260-208ENST00000555905 ADAMTSL1Q8N6G6 1762 aa13.18□□□□□ -0.3
TMEM260-208ENST00000555905 PATL2C9JE40 543 aaKnown RBP13.18□□□□□ -0.3
TMEM260-208ENST00000555905 GMPSP49915 693 aaPredicted RBP13.18□□□□□ -0.3
TMEM260-208ENST00000555905 VPS53Q5VIR6 699 aa13.18□□□□□ -0.3
TMEM260-208ENST00000555905 DPF2Q92785 391 aa13.18□□□□□ -0.3
TMEM260-208ENST00000555905 CTNNA3Q9UI47 895 aa13.18□□□□□ -0.3
TMEM260-208ENST00000555905 RBM8AQ9Y5S9 174 aaKnown RBP13.18□□□□□ -0.3
TMEM260-208ENST00000555905 ZC3H4Q9UPT8 1303 aaKnown RBP13.17□□□□□ -0.3
TMEM260-208ENST00000555905 DLGAP5Q15398 846 aa13.17□□□□□ -0.3
TMEM260-208ENST00000555905 CFAP100Q494V2 611 aa13.17□□□□□ -0.3
TMEM260-208ENST00000555905 RNF20Q5VTR2 975 aa13.17□□□□□ -0.3
TMEM260-208ENST00000555905 TEX11Q8IYF3 940 aa13.17□□□□□ -0.3
TMEM260-208ENST00000555905 SH3RF3Q8TEJ3 882 aaPredicted RBP13.17□□□□□ -0.3
TMEM260-208ENST00000555905 TBC1D32Q96NH3 1257 aa13.17□□□□□ -0.3
TMEM260-208ENST00000555905 ECM29Q5VYK3 1845 aa13.16□□□□□ -0.3
TMEM260-208ENST00000555905 GSG1L2A8MUP6 293 aa13.16□□□□□ -0.3
TMEM260-208ENST00000555905 PRKAB2O43741 272 aa13.16□□□□□ -0.3
TMEM260-208ENST00000555905 USP5P45974 858 aa13.16□□□□□ -0.3
TMEM260-208ENST00000555905 TDO2P48775 406 aa13.16□□□□□ -0.3
TMEM260-208ENST00000555905 RBM25P49756 843 aaKnown RBP13.16□□□□□ -0.3
TMEM260-208ENST00000555905 ZNF280AP59817 542 aaPredicted RBP13.16□□□□□ -0.3
TMEM260-208ENST00000555905 ALX1Q15699 326 aa13.16□□□□□ -0.3
TMEM260-208ENST00000555905 APOBEC3HQ6NTF7 200 aaKnown RBP13.16□□□□□ -0.3
TMEM260-208ENST00000555905 DPY19L2Q6NUT2 758 aa13.16□□□□□ -0.3
TMEM260-208ENST00000555905 GIMAP6Q6P9H5 292 aa13.16□□□□□ -0.3
TMEM260-208ENST00000555905 NAPBQ9H115 298 aa13.16□□□□□ -0.3
TMEM260-208ENST00000555905 ATP8A2Q9NTI2 1148 aa13.16□□□□□ -0.3
TMEM260-208ENST00000555905 USP40Q9NVE5 1235 aa13.16□□□□□ -0.3
TMEM260-208ENST00000555905 ZMYM6O95789 1325 aa13.15□□□□□ -0.3
TMEM260-208ENST00000555905 CDK5RAP2Q96SN8 1893 aa13.15□□□□□ -0.3
TMEM260-208ENST00000555905 H7C1D1 291 aa13.15□□□□□ -0.3
TMEM260-208ENST00000555905 FOXP2O15409 715 aa13.15□□□□□ -0.3
TMEM260-208ENST00000555905 FGAP02671 866 aa13.15□□□□□ -0.3
TMEM260-208ENST00000555905 ZKSCAN1P17029 563 aaPredicted RBP13.15□□□□□ -0.3
TMEM260-208ENST00000555905 HSPA4P34932 840 aa13.15□□□□□ -0.3
TMEM260-208ENST00000555905 RHBDL3P58872 404 aa13.15□□□□□ -0.3
TMEM260-208ENST00000555905 NECTIN1Q15223 517 aa13.15□□□□□ -0.3
TMEM260-208ENST00000555905 IMMTQ16891 758 aaKnown RBP13.15□□□□□ -0.3
TMEM260-208ENST00000555905 CDC42EP5Q6NZY7 148 aa13.15□□□□□ -0.3
TMEM260-208ENST00000555905 MICALL2Q8IY33 904 aa13.15□□□□□ -0.3
TMEM260-208ENST00000555905 IFNL3Q8IZI9 196 aa13.15□□□□□ -0.3
TMEM260-208ENST00000555905 MTMR14Q8NCE2 650 aa13.15□□□□□ -0.3
TMEM260-208ENST00000555905 TGFBRAP1Q8WUH2 860 aa13.15□□□□□ -0.3
TMEM260-208ENST00000555905 SDR42E1Q8WUS8 393 aa13.15□□□□□ -0.3
TMEM260-208ENST00000555905 MYOZ2Q9NPC6 264 aa13.15□□□□□ -0.3
TMEM260-208ENST00000555905 TMOD2Q9NZR1 351 aa13.15□□□□□ -0.3
TMEM260-208ENST00000555905 CNOT7Q9UIV1 285 aaKnown RBP13.15□□□□□ -0.3
TMEM260-208ENST00000555905 FOCADQ5VW36 1801 aa13.15□□□□□ -0.3
TMEM260-208ENST00000555905 NAV1Q8NEY1 1877 aa13.14□□□□□ -0.31
TMEM260-208ENST00000555905 MYO1BO43795 1136 aa13.14□□□□□ -0.31
TMEM260-208ENST00000555905 LMOD1P29536 600 aaPredicted RBP13.14□□□□□ -0.31
TMEM260-208ENST00000555905 ANAPC15P60006 121 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms