RNA–Protein interactions for RNA: ENST00000555648.1

SNX6-205, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-205ENST00000555648 WRNIP1Q96S55 665 aa19.07■□□□□ 0.64
SNX6-205ENST00000555648 USP40Q9NVE5 1235 aa19.07■□□□□ 0.64
SNX6-205ENST00000555648 ABCF2Q9UG63 623 aa19.07■□□□□ 0.64
SNX6-205ENST00000555648 IGF2BP3O00425 579 aaKnown RBP eCLIP19.06■□□□□ 0.64
SNX6-205ENST00000555648 GJA5P36382 358 aa19.06■□□□□ 0.64
SNX6-205ENST00000555648 GTF2A2P52657 109 aa19.06■□□□□ 0.64
SNX6-205ENST00000555648 TCP10Q12799 353 aa19.06■□□□□ 0.64
SNX6-205ENST00000555648 TMEM57Q8N5G2 664 aa19.06■□□□□ 0.64
SNX6-205ENST00000555648 FAM151AQ8WW52 585 aa19.06■□□□□ 0.64
SNX6-205ENST00000555648 OTUD5Q96G74 571 aa19.06■□□□□ 0.64
SNX6-205ENST00000555648 XAGE2Q96GT9 111 aa19.06■□□□□ 0.64
SNX6-205ENST00000555648 ZNF341Q9BYN7 854 aa19.06■□□□□ 0.64
SNX6-205ENST00000555648 TNNQ9UQP3 1299 aa19.06■□□□□ 0.64
SNX6-205ENST00000555648 OS9Q13438 667 aaPredicted RBP19.05■□□□□ 0.64
SNX6-205ENST00000555648 CDC42EP5Q6NZY7 148 aa19.05■□□□□ 0.64
SNX6-205ENST00000555648 R3HDMLQ9H3Y0 253 aa19.05■□□□□ 0.64
SNX6-205ENST00000555648 ECM29Q5VYK3 1845 aa19.04■□□□□ 0.64
SNX6-205ENST00000555648 CCL15-CCL14A0A0B4J2E2 113 aa19.04■□□□□ 0.64
SNX6-205ENST00000555648 RGS19P49795 217 aa19.04■□□□□ 0.64
SNX6-205ENST00000555648 RASGRF1Q13972 1273 aa19.04■□□□□ 0.64
SNX6-205ENST00000555648 CCL15Q16663 113 aa19.04■□□□□ 0.64
SNX6-205ENST00000555648 MIGA2Q7L4E1 593 aa19.04■□□□□ 0.64
SNX6-205ENST00000555648 ERO1BQ86YB8 467 aa19.04■□□□□ 0.64
SNX6-205ENST00000555648 ITPRIPQ8IWB1 547 aa19.04■□□□□ 0.64
SNX6-205ENST00000555648 ARAP2Q8WZ64 1704 aa19.04■□□□□ 0.64
SNX6-205ENST00000555648 HPS5Q9UPZ3 1129 aa19.04■□□□□ 0.64
SNX6-205ENST00000555648 TESPA1A2RU30 521 aaPredicted RBP19.03■□□□□ 0.64
SNX6-205ENST00000555648 CRHR2Q13324 411 aa19.03■□□□□ 0.64
SNX6-205ENST00000555648 FBXO46Q6PJ61 603 aaPredicted RBP19.03■□□□□ 0.64
SNX6-205ENST00000555648 ERICH6Q7L0X2 663 aa19.03■□□□□ 0.64
SNX6-205ENST00000555648 CNKSR2Q8WXI2 1034 aa19.03■□□□□ 0.64
SNX6-205ENST00000555648 ERO1AQ96HE7 468 aa19.03■□□□□ 0.64
SNX6-205ENST00000555648 RPAP1Q9BWH6 1393 aaPredicted RBP19.03■□□□□ 0.64
SNX6-205ENST00000555648 PDS5AQ29RF7 1337 aaKnown RBP19.02■□□□□ 0.64
SNX6-205ENST00000555648 PNMA6EA0A0J9YXQ4 647 aa19.02■□□□□ 0.64
SNX6-205ENST00000555648 SPDYE5A6NIY4 337 aa19.02■□□□□ 0.64
SNX6-205ENST00000555648 ZBTB22O15209 634 aa19.02■□□□□ 0.64
SNX6-205ENST00000555648 SOX10P56693 466 aa19.02■□□□□ 0.64
SNX6-205ENST00000555648 ZSCAN29Q8IWY8 852 aaPredicted RBP19.02■□□□□ 0.64
SNX6-205ENST00000555648 ZKSCAN4Q969J2 545 aaPredicted RBP19.02■□□□□ 0.64
SNX6-205ENST00000555648 ZFYVE28Q9HCC9 887 aa19.02■□□□□ 0.64
SNX6-205ENST00000555648 TRIM17Q9Y577 477 aa19.02■□□□□ 0.64
SNX6-205ENST00000555648 CETPP11597 493 aa19.01■□□□□ 0.63
SNX6-205ENST00000555648 NFIAQ12857 509 aa19.01■□□□□ 0.63
SNX6-205ENST00000555648 SNAPC2Q13487 334 aa19.01■□□□□ 0.63
SNX6-205ENST00000555648 TAF1CQ15572 869 aaPredicted RBP19.01■□□□□ 0.63
SNX6-205ENST00000555648 MS4A4AQ96JQ5 239 aa19.01■□□□□ 0.63
SNX6-205ENST00000555648 PTPN18Q99952 460 aa19.01■□□□□ 0.63
SNX6-205ENST00000555648 SNCAIPQ9Y6H5 919 aa19.01■□□□□ 0.63
SNX6-205ENST00000555648 UQCRFS1P1P0C7P4 283 aa19■□□□□ 0.63
SNX6-205ENST00000555648 GSTO1P78417 241 aa19■□□□□ 0.63
SNX6-205ENST00000555648 ARHGEF6Q15052 776 aa19■□□□□ 0.63
SNX6-205ENST00000555648 BRI3BPQ8WY22 251 aa19■□□□□ 0.63
SNX6-205ENST00000555648 ZBED9Q6R2W3 1325 aa19■□□□□ 0.63
SNX6-205ENST00000555648 SURF6O75683 361 aaKnown RBP18.99■□□□□ 0.63
SNX6-205ENST00000555648 LDHCP07864 332 aa18.99■□□□□ 0.63
SNX6-205ENST00000555648 SP3Q02447 781 aa18.99■□□□□ 0.63
SNX6-205ENST00000555648 SPATA5Q8NB90 893 aa18.99■□□□□ 0.63
SNX6-205ENST00000555648 RAI14Q9P0K7 980 aa18.99■□□□□ 0.63
SNX6-205ENST00000555648 ENTPD3O75355 529 aa18.98■□□□□ 0.63
SNX6-205ENST00000555648 INPP5BP32019 993 aa18.98■□□□□ 0.63
SNX6-205ENST00000555648 BTDP43251 543 aa18.98■□□□□ 0.63
SNX6-205ENST00000555648 RGS3P49796 1198 aa18.98■□□□□ 0.63
SNX6-205ENST00000555648 ATP8B2P98198 1209 aa18.98■□□□□ 0.63
SNX6-205ENST00000555648 PPATQ06203 517 aa18.98■□□□□ 0.63
SNX6-205ENST00000555648 PPIL2Q13356 520 aa18.98■□□□□ 0.63
SNX6-205ENST00000555648 CCDC158Q5M9N0 1113 aa18.98■□□□□ 0.63
SNX6-205ENST00000555648 TTC39AQ5SRH9 613 aa18.98■□□□□ 0.63
SNX6-205ENST00000555648 C1orf115Q9H7X2 142 aa18.98■□□□□ 0.63
SNX6-205ENST00000555648 HMG20BQ9P0W2 317 aa18.98■□□□□ 0.63
SNX6-205ENST00000555648 FAM198AQ9UFP1 575 aa18.98■□□□□ 0.63
SNX6-205ENST00000555648 GAKO14976 1311 aa18.98■□□□□ 0.63
SNX6-205ENST00000555648 IRF6O14896 467 aa18.97■□□□□ 0.63
SNX6-205ENST00000555648 MECOMQ03112 1051 aa18.97■□□□□ 0.63
SNX6-205ENST00000555648 PICALMQ13492 652 aa18.97■□□□□ 0.63
SNX6-205ENST00000555648 POLA2Q14181 598 aa18.97■□□□□ 0.63
SNX6-205ENST00000555648 OTOP1Q7RTM1 612 aa18.97■□□□□ 0.63
SNX6-205ENST00000555648 CD99L2Q8TCZ2 262 aa18.97■□□□□ 0.63
SNX6-205ENST00000555648 FAM163AQ96GL9 167 aaPredicted RBP18.97■□□□□ 0.63
SNX6-205ENST00000555648 NOL10Q9BSC4 688 aaKnown RBP18.97■□□□□ 0.63
SNX6-205ENST00000555648 IDI2Q9BXS1 227 aa18.97■□□□□ 0.63
SNX6-205ENST00000555648 EFCC1Q9HA90 598 aa18.97■□□□□ 0.63
SNX6-205ENST00000555648 LRP2BPQ9P2M1 347 aa18.97■□□□□ 0.63
SNX6-205ENST00000555648 MROH7-TTC4A0A0A0MT08 1334 aa18.97■□□□□ 0.63
SNX6-205ENST00000555648 MS4A1P11836 297 aa18.96■□□□□ 0.63
SNX6-205ENST00000555648 FAM43AQ8N2R8 423 aa18.96■□□□□ 0.63
SNX6-205ENST00000555648 PICK1Q9NRD5 415 aa18.96■□□□□ 0.63
SNX6-205ENST00000555648 ARID4AP29374 1257 aaPredicted RBP18.95■□□□□ 0.62
SNX6-205ENST00000555648 KIF22Q14807 665 aa18.95■□□□□ 0.62
SNX6-205ENST00000555648 TNNI3KQ59H18 835 aa18.95■□□□□ 0.62
SNX6-205ENST00000555648 TBC1D9Q6ZT07 1266 aa18.95■□□□□ 0.62
SNX6-205ENST00000555648 ZFPM1Q8IX07 1006 aa18.95■□□□□ 0.62
SNX6-205ENST00000555648 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.95■□□□□ 0.62
SNX6-205ENST00000555648 SSH3Q8TE77 659 aa18.95■□□□□ 0.62
SNX6-205ENST00000555648 ZCCHC17Q9NP64 241 aaKnown RBP18.95■□□□□ 0.62
SNX6-205ENST00000555648 GPR108Q9NPR9 543 aa18.95■□□□□ 0.62
SNX6-205ENST00000555648 ZNF112Q9UJU3 913 aa18.95■□□□□ 0.62
SNX6-205ENST00000555648 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.95■□□□□ 0.62
SNX6-205ENST00000555648 FPGT-TNNI3KV9GXZ4 949 aa18.95■□□□□ 0.62
SNX6-205ENST00000555648 PI16Q6UXB8 463 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms