RNA–Protein interactions for RNA: ENST00000555573.5

KTN1-223, Transcript of kinectin 1, human

TSL 2 BASIC

Gene KTN1, Length 1,712 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KTN1-223	ENST00000555573	DDX3Y	O15523	660 aa	Known RBP	7.34	□□□□□ -1.23
KTN1-223	ENST00000555573	ADAM11	O75078	769 aa		7.34	□□□□□ -1.23
KTN1-223	ENST00000555573	CTSB	P07858	339 aa		7.34	□□□□□ -1.23
KTN1-223	ENST00000555573	ATF4	P18848	351 aa	Predicted RBP	7.34	□□□□□ -1.23
KTN1-223	ENST00000555573	TRAPPC3L	Q5T215	181 aa		7.34	□□□□□ -1.23
KTN1-223	ENST00000555573	VPS37D	Q86XT2	251 aa		7.34	□□□□□ -1.23
KTN1-223	ENST00000555573	CORO1B	Q9BR76	489 aa		7.34	□□□□□ -1.23
KTN1-223	ENST00000555573	ENAM	Q9NRM1	1142 aa		7.34	□□□□□ -1.23
KTN1-223	ENST00000555573	FAM221A	A4D161	298 aa		7.33	□□□□□ -1.24
KTN1-223	ENST00000555573	FAM181B	A6NEQ2	426 aa		7.33	□□□□□ -1.24
KTN1-223	ENST00000555573	ARHGEF15	O94989	841 aa		7.33	□□□□□ -1.24
KTN1-223	ENST00000555573	APOBR	Q0VD83	1088 aa		7.33	□□□□□ -1.24
KTN1-223	ENST00000555573	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	7.33	□□□□□ -1.24
KTN1-223	ENST00000555573	FOXD4L3	Q6VB84	417 aa	Predicted RBP	7.33	□□□□□ -1.24
KTN1-223	ENST00000555573	LINC00114	Q6XXX2	140 aa		7.33	□□□□□ -1.24
KTN1-223	ENST00000555573	CCDC84	Q86UT8	332 aa	Predicted RBP	7.33	□□□□□ -1.24
KTN1-223	ENST00000555573	MAP4K3	Q8IVH8	894 aa		7.33	□□□□□ -1.24
KTN1-223	ENST00000555573	GATAD2B	Q8WXI9	593 aa		7.33	□□□□□ -1.24
KTN1-223	ENST00000555573	USP26	Q9BXU7	913 aa		7.33	□□□□□ -1.24
KTN1-223	ENST00000555573	KCNK4	Q9NYG8	393 aa		7.33	□□□□□ -1.24
KTN1-223	ENST00000555573	TLR3	O15455	904 aa	Known RBP	7.32	□□□□□ -1.24
KTN1-223	ENST00000555573	TRIM37	O94972	964 aa		7.32	□□□□□ -1.24
KTN1-223	ENST00000555573	FGR	P09769	529 aa		7.32	□□□□□ -1.24
KTN1-223	ENST00000555573	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	7.32	□□□□□ -1.24
KTN1-223	ENST00000555573	MCF2L2	Q86YR7	1114 aa		7.32	□□□□□ -1.24
KTN1-223	ENST00000555573	CCDC86	Q9H6F5	360 aa	Known RBP	7.32	□□□□□ -1.24
KTN1-223	ENST00000555573	GINM1	Q9NU53	330 aa		7.32	□□□□□ -1.24
KTN1-223	ENST00000555573	CACNA2D2	Q9NY47	1150 aa		7.32	□□□□□ -1.24
KTN1-223	ENST00000555573	EFR3B	Q9Y2G0	817 aa		7.32	□□□□□ -1.24
KTN1-223	ENST00000555573		A0A0A0MRY4	1105 aa		7.32	□□□□□ -1.24
KTN1-223	ENST00000555573	WIPF1	O43516	503 aa		7.32	□□□□□ -1.24
KTN1-223	ENST00000555573	EIF4EBP3	O60516	100 aa	Predicted RBP	7.32	□□□□□ -1.24
KTN1-223	ENST00000555573	CILP	O75339	1184 aa		7.32	□□□□□ -1.24
KTN1-223	ENST00000555573	CD68	P34810	354 aa	Predicted RBP	7.32	□□□□□ -1.24
KTN1-223	ENST00000555573	DTWD1	Q8N5C7	304 aa		7.32	□□□□□ -1.24
KTN1-223	ENST00000555573	GPBAR1	Q8TDU6	330 aa		7.32	□□□□□ -1.24
KTN1-223	ENST00000555573	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	7.32	□□□□□ -1.24	1e-7	■□□□□ 9.6
KTN1-223	ENST00000555573	LOC100289279	A0A1B0GTE1	492 aa		7.31	□□□□□ -1.24
KTN1-223	ENST00000555573	DLGAP3	O95886	979 aa		7.31	□□□□□ -1.24
KTN1-223	ENST00000555573	ATP2B1	P20020	1258 aa		7.31	□□□□□ -1.24
KTN1-223	ENST00000555573	NASP	P49321	788 aa	Predicted RBP	7.31	□□□□□ -1.24
KTN1-223	ENST00000555573	SEZ6	Q53EL9	994 aa		7.31	□□□□□ -1.24
KTN1-223	ENST00000555573	NKD1	Q969G9	470 aa		7.31	□□□□□ -1.24
KTN1-223	ENST00000555573	SPATA32	Q96LK8	384 aa		7.31	□□□□□ -1.24
KTN1-223	ENST00000555573	PLVAP	Q9BX97	442 aa		7.31	□□□□□ -1.24
KTN1-223	ENST00000555573	LRRC3	Q9BY71	257 aa		7.31	□□□□□ -1.24
KTN1-223	ENST00000555573	ZNF862	O60290	1169 aa		7.3	□□□□□ -1.24
KTN1-223	ENST00000555573	CDK8	P49336	464 aa		7.3	□□□□□ -1.24
KTN1-223	ENST00000555573	MPP2	Q14168	576 aa		7.3	□□□□□ -1.24
KTN1-223	ENST00000555573	PDE3A	Q14432	1141 aa		7.3	□□□□□ -1.24
KTN1-223	ENST00000555573	SCARA3	Q6AZY7	606 aa		7.3	□□□□□ -1.24
KTN1-223	ENST00000555573	FMR1NB	Q8N0W7	255 aa	Predicted RBP	7.3	□□□□□ -1.24
KTN1-223	ENST00000555573	UBXN4	Q92575	508 aa		7.3	□□□□□ -1.24
KTN1-223	ENST00000555573	DHX38	Q92620	1227 aa	Known RBP	7.3	□□□□□ -1.24
KTN1-223	ENST00000555573	WDR89	Q96FK6	387 aa	Predicted RBP	7.3	□□□□□ -1.24
KTN1-223	ENST00000555573	ACSBG1	Q96GR2	724 aa		7.3	□□□□□ -1.24
KTN1-223	ENST00000555573	SEC16B	Q96JE7	1060 aa		7.3	□□□□□ -1.24
KTN1-223	ENST00000555573	ROBO2	Q9HCK4	1378 aa		7.3	□□□□□ -1.24
KTN1-223	ENST00000555573	DLL1	O00548	723 aa		7.3	□□□□□ -1.24
KTN1-223	ENST00000555573	SELP	P16109	830 aa		7.3	□□□□□ -1.24
KTN1-223	ENST00000555573	LOR	P23490	312 aa	Predicted RBP	7.3	□□□□□ -1.24
KTN1-223	ENST00000555573	FBXO11	Q86XK2	927 aa		7.3	□□□□□ -1.24
KTN1-223	ENST00000555573	SLITRK4	Q8IW52	837 aa		7.3	□□□□□ -1.24
KTN1-223	ENST00000555573	UBASH3B	Q8TF42	649 aa		7.3	□□□□□ -1.24
KTN1-223	ENST00000555573	KRTAP4-8	Q9BYQ9	185 aa		7.3	□□□□□ -1.24
KTN1-223	ENST00000555573	KRT82	Q9NSB4	513 aa		7.3	□□□□□ -1.24
KTN1-223	ENST00000555573	PCDHA4	Q9UN74	947 aa		7.3	□□□□□ -1.24
KTN1-223	ENST00000555573	FAM229A	H3BQW9	127 aa		7.29	□□□□□ -1.24
KTN1-223	ENST00000555573	GNB5	O14775	395 aa		7.29	□□□□□ -1.24
KTN1-223	ENST00000555573	BPNT1	O95861	308 aa		7.29	□□□□□ -1.24
KTN1-223	ENST00000555573	LIG1	P18858	919 aa		7.29	□□□□□ -1.24
KTN1-223	ENST00000555573	GTF2F1	P35269	517 aa	Known RBP eCLIP	7.29	□□□□□ -1.24
KTN1-223	ENST00000555573	SOX9	P48436	509 aa		7.29	□□□□□ -1.24
KTN1-223	ENST00000555573	REC114	Q7Z4M0	266 aa		7.29	□□□□□ -1.24
KTN1-223	ENST00000555573	WISP1	O95388	367 aa		7.28	□□□□□ -1.24
KTN1-223	ENST00000555573	RAC1	P63000	192 aa		7.28	□□□□□ -1.24
KTN1-223	ENST00000555573	RPL6	Q02878	288 aa	Known RBP	7.28	□□□□□ -1.24
KTN1-223	ENST00000555573	CWF19L2	Q2TBE0	894 aa	Known RBP	7.28	□□□□□ -1.24
KTN1-223	ENST00000555573	INPP5A	Q14642	412 aa		7.27	□□□□□ -1.25
KTN1-223	ENST00000555573	BRMS1	Q9HCU9	246 aa		7.27	□□□□□ -1.25
KTN1-223	ENST00000555573	MKL2	Q9ULH7	1088 aa		7.27	□□□□□ -1.25
KTN1-223	ENST00000555573	PPT2	Q9UMR5	302 aa		7.27	□□□□□ -1.25
KTN1-223	ENST00000555573	MCM4	P33991	863 aa		7.27	□□□□□ -1.25
KTN1-223	ENST00000555573	COL9A2	Q14055	689 aa	Predicted RBP	7.27	□□□□□ -1.25
KTN1-223	ENST00000555573	DUOXA2	Q1HG44	320 aa		7.27	□□□□□ -1.25
KTN1-223	ENST00000555573	WIPI1	Q5MNZ9	446 aa	Predicted RBP	7.27	□□□□□ -1.25
KTN1-223	ENST00000555573	PLPPR2	Q96GM1	343 aa		7.27	□□□□□ -1.25
KTN1-223	ENST00000555573	DNAJC2	Q99543	621 aa	Known RBP	7.27	□□□□□ -1.25
KTN1-223	ENST00000555573	WDR18	Q9BV38	432 aa		7.27	□□□□□ -1.25
KTN1-223	ENST00000555573	POLR3K	Q9Y2Y1	108 aa	Predicted RBP	7.27	□□□□□ -1.25
KTN1-223	ENST00000555573	KIF4B	Q2VIQ3	1234 aa		7.26	□□□□□ -1.25
KTN1-223	ENST00000555573	DIEXF	Q68CQ4	756 aa	Known RBP	7.26	□□□□□ -1.25
KTN1-223	ENST00000555573	LRFN4	Q6PJG9	635 aa		7.26	□□□□□ -1.25
KTN1-223	ENST00000555573	CCDC81	Q6ZN84	652 aa		7.26	□□□□□ -1.25
KTN1-223	ENST00000555573	DCAF11	Q8TEB1	546 aa		7.26	□□□□□ -1.25
KTN1-223	ENST00000555573	GFRA2	O00451	464 aa		7.25	□□□□□ -1.25
KTN1-223	ENST00000555573	GRIN3B	O60391	1043 aa		7.25	□□□□□ -1.25
KTN1-223	ENST00000555573	AOC2	O75106	756 aa		7.25	□□□□□ -1.25
KTN1-223	ENST00000555573	SSB	P05455	408 aa	Known RBP eCLIP	7.25	□□□□□ -1.25
KTN1-223	ENST00000555573	CLC	Q05315	142 aa		7.25	□□□□□ -1.25

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